BLASTX nr result
ID: Glycyrrhiza23_contig00022525
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00022525 (320 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 152 3e-35 ref|XP_002519306.1| nucleic acid binding protein, putative [Rici... 79 4e-13 ref|XP_002312298.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779... 73 3e-11 ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]... 72 5e-11 >ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine max] Length = 233 Score = 152 bits (384), Expect = 3e-35 Identities = 77/106 (72%), Positives = 85/106 (80%) Frame = +1 Query: 1 WKLVLYPNGIGEGKGNSVSLILALEVSTLPPNTKLVVDLTLRAKDQISGQHAQQKFRRMF 180 WKL+LYPNGI EGKGNS+SL L LEVSTLPPNTKLVV+ TLRAK QISG HAQ F R F Sbjct: 126 WKLILYPNGIVEGKGNSISLFLTLEVSTLPPNTKLVVECTLRAKKQISGHHAQTGFCRKF 185 Query: 181 SSSRYLGGSRKFVALAKLKNSKSGLLVEDTCIFEAEFTVLGLITPR 318 SSS G+R+ VALAKL + SG LV DTCI EAEFT+LGL+TPR Sbjct: 186 SSSNSTWGTRQLVALAKLTDPNSGFLVNDTCILEAEFTILGLMTPR 231 >ref|XP_002519306.1| nucleic acid binding protein, putative [Ricinus communis] gi|223541621|gb|EEF43170.1| nucleic acid binding protein, putative [Ricinus communis] Length = 455 Score = 79.0 bits (193), Expect = 4e-13 Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 1/103 (0%) Frame = +1 Query: 1 WKLVLYPNGIGEGKGNSVSLILAL-EVSTLPPNTKLVVDLTLRAKDQISGQHAQQKFRRM 177 WK+ LYP G G G G +SL LAL +++ + P K++ D TLR DQ G H K Sbjct: 349 WKIQLYPKGKGLGSGTHLSLFLALADLTAITPGFKILADFTLRILDQSRGSHLFGKANFW 408 Query: 178 FSSSRYLGGSRKFVALAKLKNSKSGLLVEDTCIFEAEFTVLGL 306 FS+S + G +F L +L S + L +DTC+ EAE TVLG+ Sbjct: 409 FSASSSVCGWSRFYPLDQLYASSNAYLFKDTCLGEAEITVLGI 451 >ref|XP_002312298.1| predicted protein [Populus trichocarpa] gi|222852118|gb|EEE89665.1| predicted protein [Populus trichocarpa] Length = 292 Score = 73.2 bits (178), Expect = 2e-11 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 2/107 (1%) Frame = +1 Query: 1 WKLVLYPNGIGEGKGNSVSLILALEVSTLPPNTKLVVDLTLRAKDQISGQ--HAQQKFRR 174 WK++LYP G G G +SL LA+++ TLP +L D TLR +Q+ + K + Sbjct: 185 WKILLYPKGKDFGMGTHLSLYLAVDLETLPAGCRLYADYTLRIVNQVKDRKLDLSAKAKH 244 Query: 175 MFSSSRYLGGSRKFVALAKLKNSKSGLLVEDTCIFEAEFTVLGLITP 315 F +SR G ++V+L + + +++D CI EAE VLG+ +P Sbjct: 245 WFGASRSESGWTRYVSLDYIYQPNNAYVIKDICIIEAEVNVLGISSP 291 >ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779090 [Glycine max] Length = 310 Score = 72.8 bits (177), Expect = 3e-11 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Frame = +1 Query: 1 WKLVLYPNGIGEGKGNSVSLILAL-EVSTLPPNTKLVVDLTLRAKDQISGQHAQQKFRRM 177 WK+ LYP G G GN +SL LAL + S L P +K+ +TLR DQ +H K Sbjct: 203 WKIKLYPKGKGAELGNYLSLYLALADPSALSPCSKIYAQITLRILDQKQAKHHFGKANYW 262 Query: 178 FSSSRYLGGSRKFVALAKLKNSKSGLLVEDTCIFEAEFTVLGLI 309 FS+S + G+ F+ + N G +V+D+C EAE +LG++ Sbjct: 263 FSASSHENGAAIFMPINNFTNQNFGYVVKDSCFVEAEVIILGVV 306 >ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana] gi|332642426|gb|AEE75947.1| TRAF-like family protein [Arabidopsis thaliana] Length = 309 Score = 72.0 bits (175), Expect = 5e-11 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Frame = +1 Query: 1 WKLVLYPNGIGEGKGNSVSLILAL-EVSTLPPNTKLVVDLTLRAKDQISGQHAQQKFRRM 177 WK+ YP G +G G +S+ L L + T+ TK+ V+ T+R DQ+ G+H K + Sbjct: 203 WKIEFYPTGTKQGTGTHLSIYLTLVDPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTKW 262 Query: 178 FSSSRYLGGSRKFVALAKLKNSKSGLLVEDTCIFEAEFTVLGL 306 FS S G K+V++ SGLL++D C+ EA+ V G+ Sbjct: 263 FSRSSSEHGWVKYVSMVYFTQPNSGLLLKDVCLVEADVCVHGI 305