BLASTX nr result

ID: Glycyrrhiza23_contig00022525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022525
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   152   3e-35
ref|XP_002519306.1| nucleic acid binding protein, putative [Rici...    79   4e-13
ref|XP_002312298.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779...    73   3e-11
ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]...    72   5e-11

>ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
           max]
          Length = 233

 Score =  152 bits (384), Expect = 3e-35
 Identities = 77/106 (72%), Positives = 85/106 (80%)
 Frame = +1

Query: 1   WKLVLYPNGIGEGKGNSVSLILALEVSTLPPNTKLVVDLTLRAKDQISGQHAQQKFRRMF 180
           WKL+LYPNGI EGKGNS+SL L LEVSTLPPNTKLVV+ TLRAK QISG HAQ  F R F
Sbjct: 126 WKLILYPNGIVEGKGNSISLFLTLEVSTLPPNTKLVVECTLRAKKQISGHHAQTGFCRKF 185

Query: 181 SSSRYLGGSRKFVALAKLKNSKSGLLVEDTCIFEAEFTVLGLITPR 318
           SSS    G+R+ VALAKL +  SG LV DTCI EAEFT+LGL+TPR
Sbjct: 186 SSSNSTWGTRQLVALAKLTDPNSGFLVNDTCILEAEFTILGLMTPR 231


>ref|XP_002519306.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223541621|gb|EEF43170.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 455

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1   WKLVLYPNGIGEGKGNSVSLILAL-EVSTLPPNTKLVVDLTLRAKDQISGQHAQQKFRRM 177
           WK+ LYP G G G G  +SL LAL +++ + P  K++ D TLR  DQ  G H   K    
Sbjct: 349 WKIQLYPKGKGLGSGTHLSLFLALADLTAITPGFKILADFTLRILDQSRGSHLFGKANFW 408

Query: 178 FSSSRYLGGSRKFVALAKLKNSKSGLLVEDTCIFEAEFTVLGL 306
           FS+S  + G  +F  L +L  S +  L +DTC+ EAE TVLG+
Sbjct: 409 FSASSSVCGWSRFYPLDQLYASSNAYLFKDTCLGEAEITVLGI 451


>ref|XP_002312298.1| predicted protein [Populus trichocarpa] gi|222852118|gb|EEE89665.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
 Frame = +1

Query: 1   WKLVLYPNGIGEGKGNSVSLILALEVSTLPPNTKLVVDLTLRAKDQISGQ--HAQQKFRR 174
           WK++LYP G   G G  +SL LA+++ TLP   +L  D TLR  +Q+  +      K + 
Sbjct: 185 WKILLYPKGKDFGMGTHLSLYLAVDLETLPAGCRLYADYTLRIVNQVKDRKLDLSAKAKH 244

Query: 175 MFSSSRYLGGSRKFVALAKLKNSKSGLLVEDTCIFEAEFTVLGLITP 315
            F +SR   G  ++V+L  +    +  +++D CI EAE  VLG+ +P
Sbjct: 245 WFGASRSESGWTRYVSLDYIYQPNNAYVIKDICIIEAEVNVLGISSP 291


>ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779090 [Glycine max]
          Length = 310

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   WKLVLYPNGIGEGKGNSVSLILAL-EVSTLPPNTKLVVDLTLRAKDQISGQHAQQKFRRM 177
           WK+ LYP G G   GN +SL LAL + S L P +K+   +TLR  DQ   +H   K    
Sbjct: 203 WKIKLYPKGKGAELGNYLSLYLALADPSALSPCSKIYAQITLRILDQKQAKHHFGKANYW 262

Query: 178 FSSSRYLGGSRKFVALAKLKNSKSGLLVEDTCIFEAEFTVLGLI 309
           FS+S +  G+  F+ +    N   G +V+D+C  EAE  +LG++
Sbjct: 263 FSASSHENGAAIFMPINNFTNQNFGYVVKDSCFVEAEVIILGVV 306


>ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]
           gi|332642426|gb|AEE75947.1| TRAF-like family protein
           [Arabidopsis thaliana]
          Length = 309

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = +1

Query: 1   WKLVLYPNGIGEGKGNSVSLILAL-EVSTLPPNTKLVVDLTLRAKDQISGQHAQQKFRRM 177
           WK+  YP G  +G G  +S+ L L +  T+   TK+ V+ T+R  DQ+ G+H   K  + 
Sbjct: 203 WKIEFYPTGTKQGTGTHLSIYLTLVDPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTKW 262

Query: 178 FSSSRYLGGSRKFVALAKLKNSKSGLLVEDTCIFEAEFTVLGL 306
           FS S    G  K+V++       SGLL++D C+ EA+  V G+
Sbjct: 263 FSRSSSEHGWVKYVSMVYFTQPNSGLLLKDVCLVEADVCVHGI 305


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