BLASTX nr result

ID: Glycyrrhiza23_contig00022510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022510
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glyc...   264   6e-69
ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   258   3e-67
ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic su...   256   1e-66
ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|2...   255   3e-66
ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group] g...   253   9e-66

>ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
           gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA
           polymerase delta catalytic subunit
           gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine
           max]
          Length = 1088

 Score =  264 bits (674), Expect = 6e-69
 Identities = 127/133 (95%), Positives = 129/133 (96%)
 Frame = +2

Query: 2   CQLEFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTL 181
           CQLEFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTL
Sbjct: 245 CQLEFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTL 304

Query: 182 QGEDQPFIRNVMTLKSCAPIVGVDVMSFDTEREVLLAWRDLIREVDPDIIIGYNICKFDL 361
           QGEDQPFIRNVMTLKSC+PIVGVDVM F+TEREVLLAWRD IREVDPDIIIGYNICKFDL
Sbjct: 305 QGEDQPFIRNVMTLKSCSPIVGVDVMPFETEREVLLAWRDFIREVDPDIIIGYNICKFDL 364

Query: 362 PYLIERAAALKIA 400
           PYLIERA  LKIA
Sbjct: 365 PYLIERALNLKIA 377


>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
           gi|296088521|emb|CBI37512.3| unnamed protein product
           [Vitis vinifera]
          Length = 1089

 Score =  258 bits (660), Expect = 3e-67
 Identities = 122/133 (91%), Positives = 128/133 (96%)
 Frame = +2

Query: 2   CQLEFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTL 181
           CQLEFDCLYSEL SH PEGE+SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ+ANLVTL
Sbjct: 272 CQLEFDCLYSELTSHIPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTL 331

Query: 182 QGEDQPFIRNVMTLKSCAPIVGVDVMSFDTEREVLLAWRDLIREVDPDIIIGYNICKFDL 361
           QGEDQPF+RNVMTLKSC+PIVGVDVMSF+TEREVLLAWRD IREVDPDIIIGYNICKFDL
Sbjct: 332 QGEDQPFVRNVMTLKSCSPIVGVDVMSFETEREVLLAWRDFIREVDPDIIIGYNICKFDL 391

Query: 362 PYLIERAAALKIA 400
           PYLIERA+ L IA
Sbjct: 392 PYLIERASVLGIA 404


>ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
           sativus]
          Length = 1086

 Score =  256 bits (654), Expect = 1e-66
 Identities = 120/132 (90%), Positives = 128/132 (96%)
 Frame = +2

Query: 2   CQLEFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTL 181
           CQLEFDCLYS+LISHAPEGE+SKMAPFRILSFDIECAGRKGHFPEPT DPVIQ+ANLVTL
Sbjct: 269 CQLEFDCLYSDLISHAPEGEFSKMAPFRILSFDIECAGRKGHFPEPTQDPVIQVANLVTL 328

Query: 182 QGEDQPFIRNVMTLKSCAPIVGVDVMSFDTEREVLLAWRDLIREVDPDIIIGYNICKFDL 361
           QGEDQPF+RNVMTL +C+PI GVDV+SFDTER+VLLAWRDLIREVDPDIIIGYNICKFDL
Sbjct: 329 QGEDQPFVRNVMTLNTCSPIAGVDVLSFDTERDVLLAWRDLIREVDPDIIIGYNICKFDL 388

Query: 362 PYLIERAAALKI 397
           PYLIERA ALKI
Sbjct: 389 PYLIERAEALKI 400


>ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|222856491|gb|EEE94038.1|
           predicted protein [Populus trichocarpa]
          Length = 1081

 Score =  255 bits (651), Expect = 3e-66
 Identities = 119/133 (89%), Positives = 128/133 (96%)
 Frame = +2

Query: 2   CQLEFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTL 181
           CQLEFDCLYSELISHA EGE+SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQ+ANLVTL
Sbjct: 264 CQLEFDCLYSELISHAAEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTL 323

Query: 182 QGEDQPFIRNVMTLKSCAPIVGVDVMSFDTEREVLLAWRDLIREVDPDIIIGYNICKFDL 361
           QGEDQPF+RN+MTL SC+PIVGVDVMSFDTEREVL+AW++ IREVDPDIIIGYNICKFDL
Sbjct: 324 QGEDQPFVRNIMTLNSCSPIVGVDVMSFDTEREVLIAWKEFIREVDPDIIIGYNICKFDL 383

Query: 362 PYLIERAAALKIA 400
           PYLIERAA L I+
Sbjct: 384 PYLIERAATLGIS 396


>ref|NP_001067405.1| Os11g0186400 [Oryza sativa Japonica Group]
           gi|13124219|sp|Q9LRE6.1|DPOD1_ORYSJ RecName: Full=DNA
           polymerase delta catalytic subunit
           gi|9188570|dbj|BAA99573.1| OsPol delta large subunit
           [Oryza sativa Japonica Group] gi|62734232|gb|AAX96341.1|
           dna polymerase delta catalytic subunit (ec 2.7.7.7)
           [Oryza sativa Japonica Group] gi|77549018|gb|ABA91815.1|
           DNA polymerase delta catalytic subunit, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113644627|dbj|BAF27768.1| Os11g0186400 [Oryza sativa
           Japonica Group]
          Length = 1105

 Score =  253 bits (647), Expect = 9e-66
 Identities = 120/132 (90%), Positives = 126/132 (95%)
 Frame = +2

Query: 2   CQLEFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTL 181
           CQLE DCLYS+L+SHA EGE+SKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTL
Sbjct: 288 CQLELDCLYSDLVSHAAEGEHSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTL 347

Query: 182 QGEDQPFIRNVMTLKSCAPIVGVDVMSFDTEREVLLAWRDLIREVDPDIIIGYNICKFDL 361
           QGE QPF+RNVMTLKSC+PIVGVDVMSFDTER+VLLAWRD IREVDPDIIIGYNICKFDL
Sbjct: 348 QGEGQPFVRNVMTLKSCSPIVGVDVMSFDTERDVLLAWRDFIREVDPDIIIGYNICKFDL 407

Query: 362 PYLIERAAALKI 397
           PYLIERA  LKI
Sbjct: 408 PYLIERAEVLKI 419


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