BLASTX nr result

ID: Glycyrrhiza23_contig00022494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022494
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519969.1| PREDICTED: TMV resistance protein N-like [Gl...   175   4e-42
ref|NP_001237768.1| TIR-NBS-LRR type disease resistance protein ...   172   2e-41
ref|XP_003548960.1| PREDICTED: TMV resistance protein N-like [Gl...   172   3e-41
emb|CAN75658.1| hypothetical protein VITISV_003715 [Vitis vinifera]   172   4e-41
ref|XP_002269168.2| PREDICTED: TMV resistance protein N-like [Vi...   171   9e-41

>ref|XP_003519969.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1028

 Score =  175 bits (444), Expect = 4e-42
 Identities = 80/131 (61%), Positives = 106/131 (80%), Gaps = 1/131 (0%)
 Frame = -3

Query: 392 YDVFLNFRGEDTRCNFTSHLHSALLRNKIHTFFDDEEIRKGDSLSPTLLSAIESSKISVT 213
           YDVFL+FRGEDTR  FT +L+++L    +HTF DDE +R+G+ ++P LL+AI++S+I++ 
Sbjct: 18  YDVFLSFRGEDTRQKFTGNLYNSLCEKGVHTFIDDEGLRRGEEITPALLNAIQNSRIAIV 77

Query: 212 VFSQNYASSAWCLDELVKIIEC-KEKKQLVVIPVFYHIDPSHVRHQRGTYEEAFTKHEER 36
           VFS+NYASS +CLD+LVKI+EC KE+K   V P+FY +DPSHVRHQ+GTY EA  KHEER
Sbjct: 78  VFSKNYASSTFCLDKLVKILECLKEEKGRSVFPIFYDVDPSHVRHQKGTYSEALAKHEER 137

Query: 35  FRDNPVKVQKW 3
           F D+  KVQKW
Sbjct: 138 FPDDSDKVQKW 148


>ref|NP_001237768.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
           gi|223452578|gb|ACM89616.1| TIR-NBS-LRR type disease
           resistance protein [Glycine max]
          Length = 299

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/130 (60%), Positives = 103/130 (79%)
 Frame = -3

Query: 392 YDVFLNFRGEDTRCNFTSHLHSALLRNKIHTFFDDEEIRKGDSLSPTLLSAIESSKISVT 213
           +DVFL+FRGEDTR  FTSHL++AL R ++ T+ D+E + +GD +SP+LL AI+ +K++V 
Sbjct: 19  HDVFLSFRGEDTRYTFTSHLYAALTRLQVKTYIDNE-LERGDEISPSLLRAIDDAKVAVI 77

Query: 212 VFSQNYASSAWCLDELVKIIECKEKKQLVVIPVFYHIDPSHVRHQRGTYEEAFTKHEERF 33
           VFS+NYASS WCLDELVKI+ECK K   +++PVFYH+DP+HVRHQ G+Y  AF  HE+RF
Sbjct: 78  VFSENYASSRWCLDELVKIMECKRKNGQIIVPVFYHVDPTHVRHQTGSYGHAFAMHEQRF 137

Query: 32  RDNPVKVQKW 3
             N  KVQ W
Sbjct: 138 VGNMNKVQTW 147


>ref|XP_003548960.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 873

 Score =  172 bits (436), Expect = 3e-41
 Identities = 77/131 (58%), Positives = 105/131 (80%)
 Frame = -3

Query: 395 KYDVFLNFRGEDTRCNFTSHLHSALLRNKIHTFFDDEEIRKGDSLSPTLLSAIESSKISV 216
           KYDVFL+FRG DTR  FT HL+ ALL   I+TF D+EE+++G+ ++P+L+ AIE S+I++
Sbjct: 11  KYDVFLSFRGSDTRHGFTGHLYKALLDRGIYTFIDNEELQRGEEITPSLVKAIEDSRIAI 70

Query: 215 TVFSQNYASSAWCLDELVKIIECKEKKQLVVIPVFYHIDPSHVRHQRGTYEEAFTKHEER 36
            VFS+NYASS +CLDELV I+ C ++K  +V+PVFY +DPS VRHQRG+YEEA  KH+E+
Sbjct: 71  LVFSKNYASSTFCLDELVHILACVKEKGTMVLPVFYEVDPSDVRHQRGSYEEALNKHKEK 130

Query: 35  FRDNPVKVQKW 3
           F D+  K+QKW
Sbjct: 131 FNDDEEKLQKW 141


>emb|CAN75658.1| hypothetical protein VITISV_003715 [Vitis vinifera]
          Length = 2019

 Score =  172 bits (435), Expect = 4e-41
 Identities = 76/118 (64%), Positives = 98/118 (83%)
 Frame = -3

Query: 392 YDVFLNFRGEDTRCNFTSHLHSALLRNKIHTFFDDEEIRKGDSLSPTLLSAIESSKISVT 213
           YDVFL+FRGEDTRC+FT HL+SAL+ N +HTF D EE+ +G +++P LL AIE S+IS+ 
Sbjct: 15  YDVFLSFRGEDTRCHFTDHLYSALIGNGVHTFRDHEELERGGAIAPGLLKAIEQSRISIV 74

Query: 212 VFSQNYASSAWCLDELVKIIECKEKKQLVVIPVFYHIDPSHVRHQRGTYEEAFTKHEE 39
           VFS+NYA S WCLDELVKIIEC+ +++ +V+PVFYH+DPSHVR Q G+Y EAF  HE+
Sbjct: 75  VFSENYAQSRWCLDELVKIIECRTEREQLVLPVFYHVDPSHVRKQMGSYGEAFAYHEK 132


>ref|XP_002269168.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 992

 Score =  171 bits (432), Expect = 9e-41
 Identities = 79/131 (60%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
 Frame = -3

Query: 392 YDVFLNFRGEDTRCNFTSHLHSALLRNKIHTFFDDEEIRKGDSLSPTLLSAIESSKISVT 213
           YDVFLNFRG DTR +FT HL+S L +N + TF DDEE+ +GD ++P LL AIE S+IS+ 
Sbjct: 13  YDVFLNFRGADTRYHFTDHLYSELRKNDVRTFRDDEELERGDVIAPGLLKAIEQSRISIV 72

Query: 212 VFSQNYASSAWCLDELVKIIECKEKKQLVVIPVFYHIDPSHVRHQRGTYEEAFTKHE-ER 36
           VFS+NYA S WCLDELVKIIEC+ +++ +V+PVFYH+DPSHVR Q G+Y EAF  HE + 
Sbjct: 73  VFSENYAQSRWCLDELVKIIECRTEREQIVLPVFYHVDPSHVRKQMGSYGEAFADHEKDA 132

Query: 35  FRDNPVKVQKW 3
                 K+QKW
Sbjct: 133 DLKKREKIQKW 143


Top