BLASTX nr result

ID: Glycyrrhiza23_contig00022485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022485
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527746.1| PREDICTED: uncharacterized protein LOC100805...   282   1e-73
ref|XP_003523639.1| PREDICTED: uncharacterized protein LOC100793...   280   3e-73
ref|XP_003545369.1| PREDICTED: uncharacterized protein LOC100775...   271   2e-70
ref|XP_003609745.1| DNA-directed RNA polymerase subunit beta [Me...   261   2e-67
gb|AFK33879.1| unknown [Lotus japonicus]                              260   4e-67

>ref|XP_003527746.1| PREDICTED: uncharacterized protein LOC100805103 [Glycine max]
          Length = 253

 Score =  282 bits (721), Expect = 1e-73
 Identities = 147/220 (66%), Positives = 170/220 (77%), Gaps = 1/220 (0%)
 Frame = -3

Query: 924 SRNVLGQNGAASEDTNETDNKK-QKPQSXXXXXXXXXXXXKGSGSDAIDINRFVIDTCRR 748
           S+NVLGQ+ A   D NE + +   K Q             KGSGS+A+DINRFV+DTCRR
Sbjct: 36  SQNVLGQSSAG--DINEPNQEPLSKNQKRRANKKKNKKKRKGSGSNAMDINRFVLDTCRR 93

Query: 747 LKEKKSYMVYTAVGCLGVSALSDLIKEVDAIQACGGQKTADGKRFRTGGGVLWSIIKVRE 568
           LKEKKSYMVYTAVGCLGVSALSDL+ EVDAIQ CGGQKTADG+RFRTGGG+LWSI+KVRE
Sbjct: 94  LKEKKSYMVYTAVGCLGVSALSDLVNEVDAIQTCGGQKTADGRRFRTGGGILWSILKVRE 153

Query: 567 PNAYKEIMKKAKEFEKQFRTPSVKQPPMQKKEDSSQGVPVTFAGGHQGNVSEDPSGTPQT 388
           P  YKEI+KKAKEFEKQFR P+V Q P+ KKEDSSQGVPV+F+G   GNVS+      Q 
Sbjct: 154 PKVYKEIIKKAKEFEKQFRQPNVMQRPVPKKEDSSQGVPVSFSGRDLGNVSDSNILASQM 213

Query: 387 EDQHEPSGPEEKRVCVHDRLRIPVSYDDELLGVSADNDAT 268
           ++QH+P+  EEK V  HDRLRIPVSYDD+LLG +  NDAT
Sbjct: 214 QNQHQPATLEEKPVSAHDRLRIPVSYDDDLLGENPINDAT 253


>ref|XP_003523639.1| PREDICTED: uncharacterized protein LOC100793038 [Glycine max]
          Length = 253

 Score =  280 bits (717), Expect = 3e-73
 Identities = 145/220 (65%), Positives = 169/220 (76%), Gaps = 1/220 (0%)
 Frame = -3

Query: 924 SRNVLGQNGAASEDTNETDNKK-QKPQSXXXXXXXXXXXXKGSGSDAIDINRFVIDTCRR 748
           ++NVLGQ+ A   D NE + +   K Q             KGSGS+A+DINRFV+DTCRR
Sbjct: 36  AQNVLGQSSAG--DINEANQEPLSKNQKRRANKKKNKKKRKGSGSNAMDINRFVLDTCRR 93

Query: 747 LKEKKSYMVYTAVGCLGVSALSDLIKEVDAIQACGGQKTADGKRFRTGGGVLWSIIKVRE 568
           LKEKKSYMVYTAVGCLGVSALSDL+ EVDAIQACGGQKTADG+RFRTGGG+LWSI+KVRE
Sbjct: 94  LKEKKSYMVYTAVGCLGVSALSDLVNEVDAIQACGGQKTADGRRFRTGGGILWSILKVRE 153

Query: 567 PNAYKEIMKKAKEFEKQFRTPSVKQPPMQKKEDSSQGVPVTFAGGHQGNVSEDPSGTPQT 388
           P  +KEIMKKAKEFEKQFR P+V Q P  KKEDSSQGVP +F+G   GNVS+      Q 
Sbjct: 154 PKVFKEIMKKAKEFEKQFRQPNVMQRPASKKEDSSQGVPFSFSGRDLGNVSDSDILASQM 213

Query: 387 EDQHEPSGPEEKRVCVHDRLRIPVSYDDELLGVSADNDAT 268
           ++QH+P+  EEK + VHDRLRIPVSYDD+LLG +  ND T
Sbjct: 214 QNQHQPATSEEKPMSVHDRLRIPVSYDDDLLGENPVNDTT 253


>ref|XP_003545369.1| PREDICTED: uncharacterized protein LOC100775515 [Glycine max]
          Length = 247

 Score =  271 bits (694), Expect = 2e-70
 Identities = 145/213 (68%), Positives = 159/213 (74%), Gaps = 2/213 (0%)
 Frame = -3

Query: 906 QNGAASEDTNETDNKKQKPQSXXXXXXXXXXXXKGSGSDAIDINRFVIDTCRRLKEKKSY 727
           QNG       E DNKK   +                 + AIDI+RFVI+TCRRLKEKKSY
Sbjct: 38  QNGVV-----EADNKKPHSKKRRRRGNKRNKKKNSGTTGAIDIDRFVINTCRRLKEKKSY 92

Query: 726 MVYTAVGCLGVSALSDLIKEVDAIQACGGQKTADGKRFRTGGGVLWSIIKVREPNAYKEI 547
           MVYTAV CLGV ALSDLI EV+AIQACGGQ T DG+RFRTGGGVLWSIIKVREPNAYKEI
Sbjct: 93  MVYTAVACLGVCALSDLINEVEAIQACGGQMTVDGRRFRTGGGVLWSIIKVREPNAYKEI 152

Query: 546 MKKAKEFEKQFRTPSVKQPPMQKKEDSSQGVPV-TFAGGHQGNVSEDPSGTPQTED-QHE 373
           +KKAKEFEKQFR P+VKQPP+QKKEDS QG    TFA GHQG VS+      Q +D QH+
Sbjct: 153 IKKAKEFEKQFRQPNVKQPPVQKKEDSFQGDDTSTFASGHQGTVSDKSFSALQMQDRQHK 212

Query: 372 PSGPEEKRVCVHDRLRIPVSYDDELLGVSADND 274
           PSG EEKR  VHDRLRI VSYDD+LLG+SADND
Sbjct: 213 PSGSEEKRNSVHDRLRIHVSYDDDLLGLSADND 245


>ref|XP_003609745.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355510800|gb|AES91942.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 294

 Score =  261 bits (667), Expect = 2e-67
 Identities = 150/294 (51%), Positives = 180/294 (61%), Gaps = 35/294 (11%)
 Frame = -3

Query: 1038 MEGEENILDSIXXXXXXXXXXXXXXXXXXXXXXXXXXDSRNVLGQNGAASEDTNETDNKK 859
            MEG ENILD+I                          +       +    E  N  ++  
Sbjct: 1    MEGGENILDAIIYEEDDVEMVDVEEGELVEEEEDHHRNGVAATQDHNLIHEAENNRNDIN 60

Query: 858  QKPQSXXXXXXXXXXXXKGS--GSDA-IDINRFVIDTCRRLKEKKSYMVYTAVGCLGVSA 688
            QKP++            + +  GSDA I+I+RFVI+TCRRLKEKKSYMVYTA+GCLGVSA
Sbjct: 61   QKPKALSKNRKRKNKRKRKALGGSDAPINIDRFVIETCRRLKEKKSYMVYTALGCLGVSA 120

Query: 687  LSDLIKE--------------------------------VDAIQACGGQKTADGKRFRTG 604
            LSD++KE                                VDAIQ+CGGQ+TADGKRFRTG
Sbjct: 121  LSDIVKETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIVDAIQSCGGQQTADGKRFRTG 180

Query: 603  GGVLWSIIKVREPNAYKEIMKKAKEFEKQFRTPSVKQPPMQKKEDSSQGVPVTFAGGHQG 424
            GGVLW+IIKVREPNAYKEIMKKA+EFEKQFR PS KQP MQK+EDSSQ VP   +  HQG
Sbjct: 181  GGVLWNIIKVREPNAYKEIMKKAREFEKQFRQPSFKQPSMQKEEDSSQVVPCPSSSAHQG 240

Query: 423  NVSEDPSGTPQTEDQHEPSGPEEKRVCVHDRLRIPVSYDDELLGVSADNDAT*P 262
            NVS++P+   Q +DQ +P G E+KRV V DRLRIPVSYDD+LLG + +ND T P
Sbjct: 241  NVSDNPTCASQLQDQDKPPGSEKKRVPVRDRLRIPVSYDDDLLGATVENDVTLP 294


>gb|AFK33879.1| unknown [Lotus japonicus]
          Length = 285

 Score =  260 bits (665), Expect = 4e-67
 Identities = 144/243 (59%), Positives = 168/243 (69%), Gaps = 24/243 (9%)
 Frame = -3

Query: 924 SRNVLGQNGAA----------SEDTNETDNKKQKPQSXXXXXXXXXXXXKGSGSDAIDIN 775
           + NV GQN A           S+++    NKK+  +              GSGS  +DIN
Sbjct: 50  TENVSGQNSAGDINGANRDPPSKNSKRRANKKKNKRKRK-----------GSGSKPLDIN 98

Query: 774 RFVIDTCRRLKEKKSYMVYTAVGCLGVSALSDLIKEVDAIQACGGQKTADGKRFRTGGGV 595
           RFV+DTCRRLKEKKSYMVYTAVGCLG+SALSD++ EVDAIQACGGQKTADG+RFRTGGGV
Sbjct: 99  RFVLDTCRRLKEKKSYMVYTAVGCLGISALSDIVNEVDAIQACGGQKTADGRRFRTGGGV 158

Query: 594 LWSIIKVREPNAYKEIMKKAKEFEKQFRTPSVKQPPMQKKEDSSQG-------------- 457
           LWSIIKVREP AYKEIMKKAKEFEKQFR P+VKQ P+ KKE+SSQG              
Sbjct: 159 LWSIIKVREPKAYKEIMKKAKEFEKQFRQPNVKQLPVPKKEESSQGVSFAGSPKEESSQV 218

Query: 456 VPVTFAGGHQGNVSEDPSGTPQTEDQHEPSGPEEKRVCVHDRLRIPVSYDDELLGVSADN 277
           V  +FAG   GN SE+     Q ++Q EP+  +E  V VHDRLRIPVSYDD+LLG S+ N
Sbjct: 219 VAFSFAGLDLGNDSENAFPAVQMQNQPEPATSKENPVSVHDRLRIPVSYDDDLLGGSSVN 278

Query: 276 DAT 268
           DA+
Sbjct: 279 DAS 281


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