BLASTX nr result

ID: Glycyrrhiza23_contig00022456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022456
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242052.1| uncharacterized protein LOC100805422 [Glycin...   349   6e-94
ref|XP_003601608.1| Elongation factor P [Medicago truncatula] gi...   330   3e-88
ref|XP_004144073.1| PREDICTED: elongation factor P-like [Cucumis...   258   1e-66
ref|XP_002463696.1| hypothetical protein SORBIDRAFT_01g004430 [S...   227   4e-57
gb|ACG41065.1| elongation factor P [Zea mays]                         227   4e-57

>ref|NP_001242052.1| uncharacterized protein LOC100805422 [Glycine max]
            gi|255641139|gb|ACU20847.1| unknown [Glycine max]
          Length = 244

 Score =  349 bits (896), Expect = 6e-94
 Identities = 186/251 (74%), Positives = 199/251 (79%)
 Frame = -1

Query: 1025 MQALMRLKLRLPNSNFNPLFRLXXXXXXXXXXXXXXXXXXXXXXXXXSAYSTATNLFTAP 846
            MQAL+ L+ RL NSN   LFRL                          A S ATNLFT+P
Sbjct: 1    MQALL-LRHRLSNSNTKSLFRLSSYFHSSSCSPRPFIPSPPS------ASSIATNLFTSP 53

Query: 845  WSATQCRGIKVSSSDIRVGNIIAKQGRIYEVLRVDHSHEGRGKATRKVELRDIGQGNKVT 666
            WSA+Q RGIKVS SDI+VGNII KQG  YEVL+VDHSHEGRGKAT KVELRDI QGNKVT
Sbjct: 54   WSASQSRGIKVSGSDIKVGNIIGKQGHFYEVLKVDHSHEGRGKATIKVELRDIDQGNKVT 113

Query: 665  QRMGTDEDFERVHAQEKTFMYMCTDQDGTVVLMDPDTLDQIEVSKDLFGKNCLYLQDEMK 486
            QRMGTDED ERV+ QEKTFM+MC D DGTVVLMDPDTLDQIEVSKDLF K+CLYL+DEMK
Sbjct: 114  QRMGTDEDVERVYVQEKTFMFMCMDSDGTVVLMDPDTLDQIEVSKDLFNKDCLYLRDEMK 173

Query: 485  VKVQFYDDKPLSASVPKRVTCTVKEGIAATPRNKKVVLDNGLTVEVPPHIIAGDAIVVNT 306
            VKV FYDDKPLSASVPKRVTC VKE IAAT RNKKVVLDNGLTVEVP HI+AGDAIVV+T
Sbjct: 174  VKVHFYDDKPLSASVPKRVTCIVKEAIAATSRNKKVVLDNGLTVEVPSHIVAGDAIVVST 233

Query: 305  EDNSYIERAKA 273
            E +SYIERAKA
Sbjct: 234  EHDSYIERAKA 244


>ref|XP_003601608.1| Elongation factor P [Medicago truncatula] gi|355490656|gb|AES71859.1|
            Elongation factor P [Medicago truncatula]
          Length = 242

 Score =  330 bits (847), Expect = 3e-88
 Identities = 174/252 (69%), Positives = 192/252 (76%), Gaps = 1/252 (0%)
 Frame = -1

Query: 1025 MQALMRLKLRLP-NSNFNPLFRLXXXXXXXXXXXXXXXXXXXXXXXXXSAYSTATNLFTA 849
            MQA M+ KL+L  NSNF  LF L                            STATN FT 
Sbjct: 1    MQAAMKQKLKLLYNSNFKSLFTLSSFKFHSYSSPLNSLPHS----------STATNSFTT 50

Query: 848  PWSATQCRGIKVSSSDIRVGNIIAKQGRIYEVLRVDHSHEGRGKATRKVELRDIGQGNKV 669
            PWS  Q RG K+  SDIRVG  I KQGRIYEVL+VDHSHEGRGKAT KVEL DI QG KV
Sbjct: 51   PWSIIQRRGNKIVGSDIRVGKKIGKQGRIYEVLKVDHSHEGRGKATLKVELLDIIQGTKV 110

Query: 668  TQRMGTDEDFERVHAQEKTFMYMCTDQDGTVVLMDPDTLDQIEVSKDLFGKNCLYLQDEM 489
            +QR+ TD++FE+ + QEK FMYMCTDQDGTVVLMD DTLDQIEVSK+LFGKNCLY+QDEM
Sbjct: 111  SQRIATDDEFEKAYIQEKNFMYMCTDQDGTVVLMDTDTLDQIEVSKELFGKNCLYIQDEM 170

Query: 488  KVKVQFYDDKPLSASVPKRVTCTVKEGIAATPRNKKVVLDNGLTVEVPPHIIAGDAIVVN 309
            KVKVQFYDDKP+SA+VPKRV CTVKE IAATPRNKKV LDNG T+EVPPHI+AGDAI+VN
Sbjct: 171  KVKVQFYDDKPISATVPKRVICTVKEVIAATPRNKKVTLDNGPTIEVPPHIVAGDAILVN 230

Query: 308  TEDNSYIERAKA 273
            TED+ YIERAKA
Sbjct: 231  TEDDCYIERAKA 242


>ref|XP_004144073.1| PREDICTED: elongation factor P-like [Cucumis sativus]
           gi|449493558|ref|XP_004159348.1| PREDICTED: elongation
           factor P-like [Cucumis sativus]
          Length = 252

 Score =  258 bits (660), Expect = 1e-66
 Identities = 123/202 (60%), Positives = 158/202 (78%), Gaps = 6/202 (2%)
 Frame = -1

Query: 863 NLFTAPWSATQCRGIKVSSSDIRVGNIIAKQGRIYEVLRVDHSHEGRGKATRKVELRDIG 684
           +L  + WS  Q RG+KV  SD++VGNII ++ RI++V +VDHSHEGRGKAT KVELRD+ 
Sbjct: 50  HLLGSLWSVIQRRGVKVHGSDVKVGNIIERKDRIFQVTKVDHSHEGRGKATIKVELRDVE 109

Query: 683 QGNKVTQRMGTDEDFERVHAQEKTFMYMCTDQDGTVVLMDPDTLDQIEVSKDLFGKNCLY 504
            GNKVTQR+ T+E  +RV   EK +++MC D+D  V+LMDPDT +Q+EVS++LFGK  +Y
Sbjct: 110 SGNKVTQRLATNESVDRVFVHEKAYIFMCKDRDAKVLLMDPDTYEQLEVSEELFGKAAMY 169

Query: 503 LQDEMKVKVQFYDDKPLSASVPKRVTCTVKE------GIAATPRNKKVVLDNGLTVEVPP 342
           LQD+MKV+VQ Y+D PLSA+VPKRVTC V E      GI A PR KK +LDNG+T++VP 
Sbjct: 170 LQDDMKVRVQLYNDTPLSATVPKRVTCVVTEAQPSMQGIQAAPREKKALLDNGMTIKVPA 229

Query: 341 HIIAGDAIVVNTEDNSYIERAK 276
           HI+ GD IV+NTED+SYIERAK
Sbjct: 230 HIVVGDVIVINTEDDSYIERAK 251


>ref|XP_002463696.1| hypothetical protein SORBIDRAFT_01g004430 [Sorghum bicolor]
           gi|241917550|gb|EER90694.1| hypothetical protein
           SORBIDRAFT_01g004430 [Sorghum bicolor]
          Length = 246

 Score =  227 bits (578), Expect = 4e-57
 Identities = 110/205 (53%), Positives = 156/205 (76%), Gaps = 6/205 (2%)
 Frame = -1

Query: 875 STATNLFTAPWSATQCRGIKVSSSDIRVGNIIAKQGRIYEVLRVDHSHEGRGKATRKVEL 696
           +T+ +L  APW+ATQ RG+K+  SD+++GNII ++GRIY+V++  HSH+GRG AT +VEL
Sbjct: 43  ATSGSLAAAPWAATQRRGVKMLGSDVKLGNIIQRRGRIYQVIKAQHSHQGRGGATIQVEL 102

Query: 695 RDIGQGNKVTQRMGTDEDFERVHAQEKTFMYMCTDQDGTVVLMDPDTLDQIEVSKDLFGK 516
           RD+  GNK+T+R  TDE  ERV  +EK+F Y+  + D TV LM+P+T +Q+EVSK+LFGK
Sbjct: 103 RDVDTGNKLTERFRTDEALERVFVEEKSFTYLYQEGD-TVTLMEPETFEQLEVSKELFGK 161

Query: 515 NCLYLQDEMKVKVQFYDDKPLSASVPKRVTCTVKE------GIAATPRNKKVVLDNGLTV 354
              YL+DEMKV +Q++D +P+S +VP+RVTCTV E      G+ A P+ K+V+LDNGL+V
Sbjct: 162 AAAYLKDEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLSV 221

Query: 353 EVPPHIIAGDAIVVNTEDNSYIERA 279
             PP I AG+ IV++T D+SY+ RA
Sbjct: 222 LAPPFIEAGEKIVISTADDSYMTRA 246


>gb|ACG41065.1| elongation factor P [Zea mays]
          Length = 246

 Score =  227 bits (578), Expect = 4e-57
 Identities = 110/205 (53%), Positives = 155/205 (75%), Gaps = 6/205 (2%)
 Frame = -1

Query: 875 STATNLFTAPWSATQCRGIKVSSSDIRVGNIIAKQGRIYEVLRVDHSHEGRGKATRKVEL 696
           +T+ +L TAPW+ATQ RG K+  SD+++GN+I ++G IY+V++  HSH+GRG AT +VEL
Sbjct: 43  ATSGSLATAPWAATQRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVEL 102

Query: 695 RDIGQGNKVTQRMGTDEDFERVHAQEKTFMYMCTDQDGTVVLMDPDTLDQIEVSKDLFGK 516
           RD+  GNK+T+R  TDE  ERV  +EK+F Y+  + D TV LM+P+T +Q+EVSK+LFGK
Sbjct: 103 RDVDTGNKITERFRTDEALERVFVEEKSFTYLYQEGD-TVTLMEPETFEQLEVSKELFGK 161

Query: 515 NCLYLQDEMKVKVQFYDDKPLSASVPKRVTCTVKE------GIAATPRNKKVVLDNGLTV 354
              YL+DEMKV +Q++D +P+S +VP+RVTCTV E      G+ A P+ K+V+LDNGLTV
Sbjct: 162 AAAYLKDEMKVNLQYFDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTV 221

Query: 353 EVPPHIIAGDAIVVNTEDNSYIERA 279
             PP I AG+ IV++T D+SY+ RA
Sbjct: 222 LAPPFIEAGENIVISTADDSYMTRA 246


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