BLASTX nr result

ID: Glycyrrhiza23_contig00022449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022449
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|3555...   344   6e-93
ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic su...   321   6e-86
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   300   1e-79
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   287   9e-76
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   276   2e-72

>ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|355513051|gb|AES94674.1|
           DNA polymerase [Medicago truncatula]
          Length = 611

 Score =  344 bits (882), Expect = 6e-93
 Identities = 164/184 (89%), Positives = 171/184 (92%)
 Frame = -2

Query: 553 SRLCASIQGTSPERLADCLGLDSSKFQHKSSEALSGDPTSTLLFAADDEERYRGCEPLVL 374
           SRLCASIQGTSPERLADCLGLD+SKFQHKSSEA S DPTS+LLFA DDEERYRGCE LVL
Sbjct: 359 SRLCASIQGTSPERLADCLGLDTSKFQHKSSEA-SDDPTSSLLFAGDDEERYRGCESLVL 417

Query: 373 SCPSCSGSFDCPPVFKSICLLGSEKPTSLGTEESYYNFWRKLSCPKCPENGVGRISPAML 194
           SCPSCS  FDCPPVFKSIC+LG+EKPTS GT+ES YNFWRKL CPKC ENG GRIS AM+
Sbjct: 418 SCPSCSSVFDCPPVFKSICMLGNEKPTSSGTDESDYNFWRKLCCPKCFENGAGRISAAMI 477

Query: 193 ANQVKRQAEKFVLMYYRGLLMCDDETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLR 14
           ANQVKRQAEKFVLMYYRGLLMCDDETCKHTTRS+SFRLVGDSERGTVCPNYPRCNGHL R
Sbjct: 478 ANQVKRQAEKFVLMYYRGLLMCDDETCKHTTRSVSFRLVGDSERGTVCPNYPRCNGHLNR 537

Query: 13  KYTE 2
           KYTE
Sbjct: 538 KYTE 541


>ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Glycine max]
          Length = 1512

 Score =  321 bits (822), Expect = 6e-86
 Identities = 153/186 (82%), Positives = 165/186 (88%), Gaps = 2/186 (1%)
 Frame = -2

Query: 553  SRLCASIQGTSPERLADCLGLDSSKFQHKSSEALSGDPTSTLLFAADDEERYRGCEPLVL 374
            SRLCA IQGTSPERLADCLGLDSSKF HKSSEAL+ D  S L F ADDEERYRGCEPLVL
Sbjct: 1260 SRLCAPIQGTSPERLADCLGLDSSKFHHKSSEALNDDSASPLSFVADDEERYRGCEPLVL 1319

Query: 373  SCPSCSGSFDCPPVFKSICLLGSE--KPTSLGTEESYYNFWRKLSCPKCPENGVGRISPA 200
            SCPSCSG+FDCPPVFKSICLLGSE  +PTS+  EE+ YNFWRKL CPKCP+    +ISP 
Sbjct: 1320 SCPSCSGTFDCPPVFKSICLLGSERQRPTSVAPEEAEYNFWRKLCCPKCPD---VKISPV 1376

Query: 199  MLANQVKRQAEKFVLMYYRGLLMCDDETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHL 20
            M+ANQVKRQAE+F+LMYYRGLL+CDDETCKHTTRSIS RLVGDSERGTVCPNYPRCNG L
Sbjct: 1377 MIANQVKRQAERFILMYYRGLLVCDDETCKHTTRSISLRLVGDSERGTVCPNYPRCNGRL 1436

Query: 19   LRKYTE 2
            +RKYTE
Sbjct: 1437 VRKYTE 1442


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  300 bits (768), Expect = 1e-79
 Identities = 142/185 (76%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
 Frame = -2

Query: 553  SRLCASIQGTSPERLADCLGLDSSKFQHKSSEALSGDPTSTLLFAADDEERYRGCEPLVL 374
            SRLCASIQGTSPERLADCLGLDSSKFQ KSSEA++ DP S+LLFA +DEERYR CEPL+L
Sbjct: 1272 SRLCASIQGTSPERLADCLGLDSSKFQIKSSEAINNDPASSLLFAVNDEERYRSCEPLLL 1331

Query: 373  SCPSCSGSFDCPPVFKSICLLGSEKPTSLGTEESYYNFWRKLSCPKCPENG-VGRISPAM 197
            SCPSCSG+F+CP VF SIC   S  PT L  EES  NFW ++ CPKCPE G  GRISPAM
Sbjct: 1332 SCPSCSGTFECPAVFGSICTSISANPTKLQVEESVSNFWCRMRCPKCPEEGDTGRISPAM 1391

Query: 196  LANQVKRQAEKFVLMYYRGLLMCDDETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLL 17
            LANQVKRQAE FV MYY+GL+ CDDETCKH TRS++ RL+GDSERGTVCPNYPRCNG L+
Sbjct: 1392 LANQVKRQAEGFVSMYYKGLMTCDDETCKHITRSLNLRLIGDSERGTVCPNYPRCNGRLV 1451

Query: 16   RKYTE 2
            RKYTE
Sbjct: 1452 RKYTE 1456


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  287 bits (734), Expect = 9e-76
 Identities = 138/185 (74%), Positives = 157/185 (84%), Gaps = 1/185 (0%)
 Frame = -2

Query: 553  SRLCASIQGTSPERLADCLGLDSSKFQHKSSEALSGDPTSTLLFAADDEERYRGCEPLVL 374
            SRLCASIQGTSPERLADCLGLDSSKF+ KSSE++   P+S+LLFAADDEERY+ CEPL+L
Sbjct: 1059 SRLCASIQGTSPERLADCLGLDSSKFRSKSSESV---PSSSLLFAADDEERYQSCEPLIL 1115

Query: 373  SCPSCSGSFDCPPVFKSICLLGSEKPTSLGTEESYYNFWRKLSCPKCPENG-VGRISPAM 197
            SCPSCSG+F CPPVF SIC    EK  +   EES  NFW +L CPKCPE G +GRISPA 
Sbjct: 1116 SCPSCSGTFHCPPVFISICTSILEKSKNPQIEESISNFWHRLCCPKCPEEGDLGRISPAT 1175

Query: 196  LANQVKRQAEKFVLMYYRGLLMCDDETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLL 17
            +ANQVKRQAE FV  YY+G++MCDDETCKHTTRS++ RLVGDSERGTVCP+YPRCNG L+
Sbjct: 1176 MANQVKRQAEGFVSTYYKGVMMCDDETCKHTTRSLNLRLVGDSERGTVCPSYPRCNGRLV 1235

Query: 16   RKYTE 2
            RKYTE
Sbjct: 1236 RKYTE 1240


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  276 bits (705), Expect = 2e-72
 Identities = 125/184 (67%), Positives = 148/184 (80%)
 Frame = -2

Query: 553  SRLCASIQGTSPERLADCLGLDSSKFQHKSSEALSGDPTSTLLFAADDEERYRGCEPLVL 374
            SRLCASIQGTSP RLADCLGLDSSKFQ+KSSEA++ DP++ LL  ADDEER+RGCEPL L
Sbjct: 1308 SRLCASIQGTSPARLADCLGLDSSKFQNKSSEAVNDDPSNALLCVADDEERFRGCEPLTL 1367

Query: 373  SCPSCSGSFDCPPVFKSICLLGSEKPTSLGTEESYYNFWRKLSCPKCPENGVGRISPAML 194
            +CPSCS SF+C P+F SIC    + P  L   ES    W + SCPKCPE   G IS A++
Sbjct: 1368 TCPSCSCSFECAPIFSSICSSIRQNPADLQVGESASKVWERFSCPKCPEESEGNISSALI 1427

Query: 193  ANQVKRQAEKFVLMYYRGLLMCDDETCKHTTRSISFRLVGDSERGTVCPNYPRCNGHLLR 14
            ANQVKRQ E F+  YY+G++MCDDETC +TTRS++ R++GDSERGTVCPNYPRCNGHLLR
Sbjct: 1428 ANQVKRQVEGFISTYYKGVMMCDDETCNYTTRSLNLRVIGDSERGTVCPNYPRCNGHLLR 1487

Query: 13   KYTE 2
            +YTE
Sbjct: 1488 QYTE 1491


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