BLASTX nr result

ID: Glycyrrhiza23_contig00022412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022412
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containin...   143   2e-32
ref|XP_003551813.1| PREDICTED: zinc finger CCCH domain-containin...   136   2e-30
ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containin...   119   3e-25
emb|CAN70443.1| hypothetical protein VITISV_015572 [Vitis vinifera]   119   3e-25
ref|XP_002515393.1| zinc finger protein, putative [Ricinus commu...   117   7e-25

>ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 495

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/78 (88%), Positives = 73/78 (93%)
 Frame = -2

Query: 305 GVDVQLSSLKKYVPTIWKPSLVGSSIWAVSNANAGIWREAELESWDEKAGVGQVVFRDDG 126
           G+DVQLS+LKKYVPTIWK SLVGSSIWAVS ANAG WREAEL+SWDEKAGVGQVVFRDDG
Sbjct: 165 GLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELKSWDEKAGVGQVVFRDDG 224

Query: 125 SSVKLGTEEMVLSEHAEV 72
           SSVKLG EEM LSEHAE+
Sbjct: 225 SSVKLGAEEMALSEHAEM 242


>ref|XP_003551813.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 492

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/78 (85%), Positives = 72/78 (92%)
 Frame = -2

Query: 305 GVDVQLSSLKKYVPTIWKPSLVGSSIWAVSNANAGIWREAELESWDEKAGVGQVVFRDDG 126
           G+DVQLS+LKKYVPTIWK SLVGSSIWAVS ANAG WREAELES DEKAGVGQVVFRD+G
Sbjct: 166 GLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANAGTWREAELESLDEKAGVGQVVFRDNG 225

Query: 125 SSVKLGTEEMVLSEHAEV 72
           SSVK+G EEM LSEHAE+
Sbjct: 226 SSVKVGAEEMALSEHAEM 243


>ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
           vinifera]
          Length = 496

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/78 (74%), Positives = 67/78 (85%)
 Frame = -2

Query: 305 GVDVQLSSLKKYVPTIWKPSLVGSSIWAVSNANAGIWREAELESWDEKAGVGQVVFRDDG 126
           GVDV LSSLK+Y PTIW+ SLVGSSIWAVS+A  GIW+EAELESWD +  VG+VVFRDDG
Sbjct: 167 GVDVHLSSLKQYNPTIWEQSLVGSSIWAVSDAKYGIWKEAELESWDNELRVGKVVFRDDG 226

Query: 125 SSVKLGTEEMVLSEHAEV 72
           SS KLGTE + LSE+AE+
Sbjct: 227 SSEKLGTESISLSEYAEM 244


>emb|CAN70443.1| hypothetical protein VITISV_015572 [Vitis vinifera]
          Length = 1119

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/78 (74%), Positives = 67/78 (85%)
 Frame = -2

Query: 305 GVDVQLSSLKKYVPTIWKPSLVGSSIWAVSNANAGIWREAELESWDEKAGVGQVVFRDDG 126
           GVDV LSSLK+Y PTIW+ SLVGSSIWAVS+A  GIW+EAELESWD +  VG+VVFRDDG
Sbjct: 7   GVDVHLSSLKQYNPTIWEQSLVGSSIWAVSDAKYGIWKEAELESWDNELRVGKVVFRDDG 66

Query: 125 SSVKLGTEEMVLSEHAEV 72
           SS KLGTE + LSE+AE+
Sbjct: 67  SSEKLGTESISLSEYAEM 84


>ref|XP_002515393.1| zinc finger protein, putative [Ricinus communis]
           gi|223545337|gb|EEF46842.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 495

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/76 (72%), Positives = 66/76 (86%)
 Frame = -2

Query: 305 GVDVQLSSLKKYVPTIWKPSLVGSSIWAVSNANAGIWREAELESWDEKAGVGQVVFRDDG 126
           GVDV LSSL+ Y+PT+W  S+VGSSIWAVS++NAGIWREAELESWD+K  VG+VVFRDDG
Sbjct: 168 GVDVPLSSLRTYIPTMWDQSMVGSSIWAVSDSNAGIWREAELESWDDKLRVGKVVFRDDG 227

Query: 125 SSVKLGTEEMVLSEHA 78
           SS +L ++ M LSEHA
Sbjct: 228 SSAELESDSMNLSEHA 243


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