BLASTX nr result

ID: Glycyrrhiza23_contig00022411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022411
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containin...    90   2e-16
ref|XP_003551813.1| PREDICTED: zinc finger CCCH domain-containin...    84   9e-15
ref|XP_002515393.1| zinc finger protein, putative [Ricinus commu...    71   1e-10
ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containin...    67   1e-09
emb|CAN70443.1| hypothetical protein VITISV_015572 [Vitis vinifera]    67   1e-09

>ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 495

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/50 (84%), Positives = 46/50 (92%)
 Frame = -3

Query: 214 ANAGIWREAELESWDEKAGVGQVVFRDDGTSVKLGAEEMVLSEHAEVDHL 65
           ANAG WREAEL+SWDEKAGVGQVVFRDDG+SVKLGAEEM LSEHAE+  +
Sbjct: 196 ANAGTWREAELKSWDEKAGVGQVVFRDDGSSVKLGAEEMALSEHAEMSDI 245


>ref|XP_003551813.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 492

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = -3

Query: 214 ANAGIWREAELESWDEKAGVGQVVFRDDGTSVKLGAEEMVLSEHAEVDHL 65
           ANAG WREAELES DEKAGVGQVVFRD+G+SVK+GAEEM LSEHAE+  L
Sbjct: 197 ANAGTWREAELESLDEKAGVGQVVFRDNGSSVKVGAEEMALSEHAEMSDL 246


>ref|XP_002515393.1| zinc finger protein, putative [Ricinus communis]
           gi|223545337|gb|EEF46842.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = -3

Query: 217 NANAGIWREAELESWDEKAGVGQVVFRDDGTSVKLGAEEMVLSEHA 80
           ++NAGIWREAELESWD+K  VG+VVFRDDG+S +L ++ M LSEHA
Sbjct: 198 DSNAGIWREAELESWDDKLRVGKVVFRDDGSSAELESDSMNLSEHA 243


>ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
           vinifera]
          Length = 496

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = -3

Query: 217 NANAGIWREAELESWDEKAGVGQVVFRDDGTSVKLGAEEMVLSEHAEV 74
           +A  GIW+EAELESWD +  VG+VVFRDDG+S KLG E + LSE+AE+
Sbjct: 197 DAKYGIWKEAELESWDNELRVGKVVFRDDGSSEKLGTESISLSEYAEM 244


>emb|CAN70443.1| hypothetical protein VITISV_015572 [Vitis vinifera]
          Length = 1119

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = -3

Query: 217 NANAGIWREAELESWDEKAGVGQVVFRDDGTSVKLGAEEMVLSEHAEV 74
           +A  GIW+EAELESWD +  VG+VVFRDDG+S KLG E + LSE+AE+
Sbjct: 37  DAKYGIWKEAELESWDNELRVGKVVFRDDGSSEKLGTESISLSEYAEM 84


Top