BLASTX nr result

ID: Glycyrrhiza23_contig00022382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022382
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]         72   4e-11
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp...    72   4e-11
gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossyp...    72   4e-11
ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11
gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossyp...    70   1e-10

>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = +2

Query: 5   KFMSKTTRREIVLRDSNRFHHFKDGLCSCRGFW 103
           KFMSK TRREIVLRDSNRFHHFKDG CSCRGFW
Sbjct: 773 KFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805


>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = +2

Query: 5   KFMSKTTRREIVLRDSNRFHHFKDGLCSCRGFW 103
           KFMSK TRREIVLRDSNRFHHFKDG CSCRGFW
Sbjct: 635 KFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667


>gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = +2

Query: 5   KFMSKTTRREIVLRDSNRFHHFKDGLCSCRGFW 103
           KFMSK TRREIVLRDSNRFHHFKDG CSCRGFW
Sbjct: 773 KFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805


>ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +2

Query: 5    KFMSKTTRREIVLRDSNRFHHFKDGLCSCRGFW 103
            KFMSKTTRREI+LRDSNRFHHFKDG CSCR FW
Sbjct: 1195 KFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227


>gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +2

Query: 5   KFMSKTTRREIVLRDSNRFHHFKDGLCSCRGFW 103
           KFMSK TRREIVLRDSNRFHHFK+G CSCRGFW
Sbjct: 773 KFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805


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