BLASTX nr result

ID: Glycyrrhiza23_contig00022359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022359
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630475.1| Cyclin A-like protein [Medicago truncatula] ...   230   8e-59
gb|AFK46051.1| unknown [Lotus japonicus]                              207   5e-52
ref|XP_003526649.1| PREDICTED: cyclin-A1-1-like [Glycine max]         201   7e-50
ref|NP_001237800.1| mitotic cyclin a2-type [Glycine max] gi|8573...   199   3e-49
ref|XP_004149427.1| PREDICTED: cyclin-A1-1-like [Cucumis sativus]     181   4e-44

>ref|XP_003630475.1| Cyclin A-like protein [Medicago truncatula]
           gi|355524497|gb|AET04951.1| Cyclin A-like protein
           [Medicago truncatula]
          Length = 531

 Score =  230 bits (587), Expect = 8e-59
 Identities = 113/131 (86%), Positives = 125/131 (95%)
 Frame = -3

Query: 399 SSSFDVLSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNTDVSAVDSIQRKTFCSLNISD 220
           SSS D+ SPGKSDGMSVSMDETMSSCDSFKSPDIEYVDN+DV AVDSI+RKTFCSLNISD
Sbjct: 142 SSSMDLSSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNSDVPAVDSIERKTFCSLNISD 201

Query: 219 TKHYPEAGNMCSRDILVQLEKGEKVVNIDNDHMDPQLCASFACDIYKHLRASEAKKRPST 40
           + +YP +GN+CSRDILV+LEKGEK+VNIDND+MDPQLCA+FACDIYKHLRASE KKRPST
Sbjct: 202 S-NYP-SGNICSRDILVELEKGEKIVNIDNDYMDPQLCATFACDIYKHLRASETKKRPST 259

Query: 39  DFMEKVQKDIN 7
           DFMEK+QKDIN
Sbjct: 260 DFMEKIQKDIN 270


>gb|AFK46051.1| unknown [Lotus japonicus]
          Length = 507

 Score =  207 bits (528), Expect = 5e-52
 Identities = 113/155 (72%), Positives = 124/155 (80%), Gaps = 2/155 (1%)
 Frame = -3

Query: 459 TTRNEDXXXXXXXXXXXXXVSSSFDVLSPGKSDGMSVSMDETMSSCDSFKSP-DIEYVDN 283
           T RNED               S+   +SP KSDG SVSMDE+MSSCDSFKSP +IEYVDN
Sbjct: 122 TERNEDDAAAAASGARASVPVSTSMDVSPCKSDGCSVSMDESMSSCDSFKSPAEIEYVDN 181

Query: 282 TDVSAVDSIQRKTFCSLNISDTKHYPEAGNMCSRDILVQ-LEKGEKVVNIDNDHMDPQLC 106
           +DVSAVDSI+RKTF  LNISD K   +AGN+CSRDILV+ LEKGEK+VNIDNDHMDPQLC
Sbjct: 182 SDVSAVDSIERKTFSILNISDAKE--QAGNICSRDILVEELEKGEKIVNIDNDHMDPQLC 239

Query: 105 ASFACDIYKHLRASEAKKRPSTDFMEKVQKDINAN 1
           ASFA DIYKHLRASEAKKRPSTDFMEKVQKDIN +
Sbjct: 240 ASFARDIYKHLRASEAKKRPSTDFMEKVQKDINTS 274


>ref|XP_003526649.1| PREDICTED: cyclin-A1-1-like [Glycine max]
          Length = 480

 Score =  201 bits (510), Expect = 7e-50
 Identities = 97/125 (77%), Positives = 112/125 (89%)
 Frame = -3

Query: 381 LSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNTDVSAVDSIQRKTFCSLNISDTKHYPE 202
           +SP KSD MSVSMDE+MSSCDSFKSPDIEYVDN DV+AVDSI+RKTF +LNISD+     
Sbjct: 125 VSPSKSDAMSVSMDESMSSCDSFKSPDIEYVDNIDVAAVDSIERKTFSNLNISDSTE--- 181

Query: 201 AGNMCSRDILVQLEKGEKVVNIDNDHMDPQLCASFACDIYKHLRASEAKKRPSTDFMEKV 22
            GN+CSRDILV+LEKGE  VN+DN++ DPQLCA+FACDIYKHLRASEAKKRPSTDFME++
Sbjct: 182 -GNICSRDILVELEKGENFVNVDNNYADPQLCATFACDIYKHLRASEAKKRPSTDFMERI 240

Query: 21  QKDIN 7
           QK+IN
Sbjct: 241 QKEIN 245


>ref|NP_001237800.1| mitotic cyclin a2-type [Glycine max] gi|857397|dbj|BAA09466.1|
           mitotic cyclin a2-type [Glycine max]
          Length = 484

 Score =  199 bits (505), Expect = 3e-49
 Identities = 96/127 (75%), Positives = 114/127 (89%)
 Frame = -3

Query: 381 LSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNTDVSAVDSIQRKTFCSLNISDTKHYPE 202
           +SP KSD MSVS DE+MSSCDSFKSPDIEYVDN+DV+AVDSI+RKTF  LNISD+     
Sbjct: 129 VSPSKSDTMSVSTDESMSSCDSFKSPDIEYVDNSDVAAVDSIERKTFSHLNISDSTE--- 185

Query: 201 AGNMCSRDILVQLEKGEKVVNIDNDHMDPQLCASFACDIYKHLRASEAKKRPSTDFMEKV 22
            GN+CSR+ILV+LEKG+K VN+DN++ DPQLCA+FACDIYKHLRASEAKKRPSTDFMEK+
Sbjct: 186 -GNICSREILVELEKGDKFVNVDNNYADPQLCATFACDIYKHLRASEAKKRPSTDFMEKI 244

Query: 21  QKDINAN 1
           QK+IN++
Sbjct: 245 QKEINSS 251


>ref|XP_004149427.1| PREDICTED: cyclin-A1-1-like [Cucumis sativus]
          Length = 506

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/137 (65%), Positives = 111/137 (81%), Gaps = 4/137 (2%)
 Frame = -3

Query: 399 SSSFDVLSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNTDVSAVDSIQRKTFCSLNISD 220
           SS  DV SP KSDG+SVS+DET+S+CDSFKSPD+EY+DNTDV AVDS++RKT  SL IS 
Sbjct: 129 SSCMDV-SPSKSDGVSVSLDETISTCDSFKSPDVEYLDNTDVPAVDSVERKTKSSLCISG 187

Query: 219 ----TKHYPEAGNMCSRDILVQLEKGEKVVNIDNDHMDPQLCASFACDIYKHLRASEAKK 52
               +   P  G++CSRD+L ++E  + +V++D D MDPQ CA+ ACDIYKHLRASEAKK
Sbjct: 188 HAPISCQPPTKGSICSRDVLTEMEIDDNIVDVDTDFMDPQQCATIACDIYKHLRASEAKK 247

Query: 51  RPSTDFMEKVQKDINAN 1
           RPSTDFMEK+QKDIN+N
Sbjct: 248 RPSTDFMEKIQKDINSN 264


Top