BLASTX nr result

ID: Glycyrrhiza23_contig00022332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022332
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...   136   2e-30
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
emb|CBI17752.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487951|gb|AES69154.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/71 (90%), Positives = 68/71 (95%)
 Frame = -1

Query: 213 LRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYGDFREDGLVEERVTFMV 34
           LRVYHVYDKMRNKFGVKPRVFLYNRIMDALV+TGHLDLALSVY DFREDGLVEE VTFM+
Sbjct: 206 LRVYHVYDKMRNKFGVKPRVFLYNRIMDALVKTGHLDLALSVYNDFREDGLVEESVTFMI 265

Query: 33  LVKGLCKAGRI 1
           L+KGLCK G+I
Sbjct: 266 LIKGLCKGGKI 276


>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Glycine max]
          Length = 733

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/71 (90%), Positives = 67/71 (94%)
 Frame = -1

Query: 213 LRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYGDFREDGLVEERVTFMV 34
           LRVYHVY+KMRNKFGVKPRVFLYNR+MDALVRTGHLDLALSVY D +EDGLVEE VTFMV
Sbjct: 216 LRVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTFMV 275

Query: 33  LVKGLCKAGRI 1
           LVKGLCK GRI
Sbjct: 276 LVKGLCKCGRI 286


>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Vitis vinifera]
          Length = 1294

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/71 (81%), Positives = 67/71 (94%)
 Frame = -1

Query: 213 LRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYGDFREDGLVEERVTFMV 34
           LRVY+VY+KM+ KFG+KPRVFLYNRIMD LV+TGHLDLA+SVY DF+EDGLVEE VT+M+
Sbjct: 743 LRVYYVYEKMK-KFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMI 801

Query: 33  LVKGLCKAGRI 1
           LVKGLCKAGRI
Sbjct: 802 LVKGLCKAGRI 812


>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/71 (81%), Positives = 67/71 (94%)
 Frame = -1

Query: 213 LRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYGDFREDGLVEERVTFMV 34
           LRVY+VY+KM+ KFG+KPRVFLYNRIMD LV+TGHLDLA+SVY DF+EDGLVEE VT+M+
Sbjct: 204 LRVYYVYEKMK-KFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMI 262

Query: 33  LVKGLCKAGRI 1
           LVKGLCKAGRI
Sbjct: 263 LVKGLCKAGRI 273


>ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|222842206|gb|EEE79753.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/71 (81%), Positives = 65/71 (91%)
 Frame = -1

Query: 213 LRVYHVYDKMRNKFGVKPRVFLYNRIMDALVRTGHLDLALSVYGDFREDGLVEERVTFMV 34
           LRVY+VY KM  KFGVKPRVFLYNRIMD+L++TGHLDLALSVY DFR DGLVEE VT+M+
Sbjct: 212 LRVYYVYQKMV-KFGVKPRVFLYNRIMDSLIKTGHLDLALSVYEDFRRDGLVEESVTYMI 270

Query: 33  LVKGLCKAGRI 1
           L+KGLCKAGRI
Sbjct: 271 LIKGLCKAGRI 281


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