BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022323
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595543.1| Pentatricopeptide repeat-containing protein ...   293   3e-77
ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containi...   265   9e-69
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   262   6e-68
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   262   6e-68
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   261   1e-67

>ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355484591|gb|AES65794.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 958

 Score =  293 bits (749), Expect = 3e-77
 Identities = 164/264 (62%), Positives = 181/264 (68%), Gaps = 25/264 (9%)
 Frame = -3

Query: 719  LIDMYGWSRAAGDARRVFDELPESDDDLVCWTAVISAFTQR--------------HVQG- 585
            LIDMYGW+RA  DARRVFDEL   DD + CWT++IS FT+                V+G 
Sbjct: 528  LIDMYGWNRAVDDARRVFDELFVKDD-VFCWTSIISCFTRNDMFKESLKFFYVMNRVRGV 586

Query: 584  -------GNAVILCCA*G--SQGKEVHXXXXXXXXXXXXXXXXXXLDMYGKCGSVKHSRI 432
                   G  +  C   G   QGKEVH                  LDMYGKCG V+HSRI
Sbjct: 587  VPDGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRI 646

Query: 431  VFDRLSD-KNSVSCTAMLSTYCQNKEYEAVLDLVREWGIADLYGFGTVLRACSGLAAVKQ 255
            VF+RLSD KN+VS TAML  YCQNKEY+ VLDLVRE G  + Y FG VLRACSGLAAV  
Sbjct: 647  VFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRERGDLNFYAFGIVLRACSGLAAVNH 706

Query: 254  GKEVHCQYVRKGGWKDVIIESALVDLYAKCGCVDFARSVFESMEVRNLITWNTMISGLAQ 75
            GKEVHC YVRKGG KDVIIESALVDLYAKCG VDFA ++F SMEVRNLITWN+M+SG AQ
Sbjct: 707  GKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQ 766

Query: 74   NGRGKEALALFEVMIKDGIKPDYI 3
            NGRG EALALFE MIK+GIKPD I
Sbjct: 767  NGRGVEALALFEDMIKEGIKPDSI 790


>ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Glycine max]
          Length = 611

 Score =  265 bits (676), Expect = 9e-69
 Identities = 142/265 (53%), Positives = 168/265 (63%), Gaps = 26/265 (9%)
 Frame = -3

Query: 719 LIDMYGWSRAAGDARRVFDELPESDDDLVCWTAVISAFTQR------------------- 597
           LIDMYG SR   DAR+VFDELPE D   VCWTAVIS   +                    
Sbjct: 197 LIDMYGRSRVVDDARKVFDELPEPD--YVCWTAVISTLARNDRFREAVRVFFAMHDGGLG 254

Query: 596 -HVQGGNAVILCCA*GS-----QGKEVHXXXXXXXXXXXXXXXXXXLDMYGKCGSVKHSR 435
             V G     L  A G+      G+EVH                  LDMYGKCG V  +R
Sbjct: 255 LEVDGFTFGTLLNACGNLGWLRMGREVHGKVVTLGMKGNVFVESSLLDMYGKCGEVGCAR 314

Query: 434 IVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREW-GIADLYGFGTVLRACSGLAAVK 258
           +VFD L +KN V+ TAML  YC N E  +VL LVREW  + D+Y FGT++RACSGLAAV+
Sbjct: 315 VVFDGLEEKNEVALTAMLGVYCHNGECGSVLGLVREWRSMVDVYSFGTIIRACSGLAAVR 374

Query: 257 QGKEVHCQYVRKGGWKDVIIESALVDLYAKCGCVDFARSVFESMEVRNLITWNTMISGLA 78
           QG EVHCQYVR+GGW+DV++ESALVDLYAKCG VDFA  +F  ME RNLITWN MI G A
Sbjct: 375 QGNEVHCQYVRRGGWRDVVVESALVDLYAKCGSVDFAYRLFSRMEARNLITWNAMIGGFA 434

Query: 77  QNGRGKEALALFEVMIKDGIKPDYI 3
           QNGRG+E + LFE M+K+G++PD+I
Sbjct: 435 QNGRGQEGVELFEEMVKEGVRPDWI 459



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 25/226 (11%)
 Frame = -3

Query: 719 LIDMYGWSRAAGDARRVFDELPESDDDLVCWTAVISAFTQRHVQGG-------------- 582
           L+DMYG     G AR VFD L E ++  V  TA++  +      G               
Sbjct: 300 LLDMYGKCGEVGCARVVFDGLEEKNE--VALTAMLGVYCHNGECGSVLGLVREWRSMVDV 357

Query: 581 ---NAVILCC---A*GSQGKEVHXXXXXXXXXXXXXXXXXXLDMYGKCGSVKHSRIVFDR 420
                +I  C   A   QG EVH                  +D+Y KCGSV  +  +F R
Sbjct: 358 YSFGTIIRACSGLAAVRQGNEVHCQYVRRGGWRDVVVESALVDLYAKCGSVDFAYRLFSR 417

Query: 419 LSDKNSVSCTAMLSTYCQN----KEYEAVLDLVREWGIADLYGFGTVLRACSGLAAVKQG 252
           +  +N ++  AM+  + QN    +  E   ++V+E    D   F  VL ACS    V QG
Sbjct: 418 MEARNLITWNAMIGGFAQNGRGQEGVELFEEMVKEGVRPDWISFVNVLFACSHNGLVDQG 477

Query: 251 KEVHCQYVRKGGWKDVIIE-SALVDLYAKCGCVDFARSVFESMEVR 117
           +       R+ G +  ++  + ++D+  +   ++ A S+ ES + R
Sbjct: 478 RRYFDLMRREYGIRPGVVHYTCMIDILGRAELIEEAESLLESADCR 523



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 42/146 (28%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
 Frame = -3

Query: 440 SRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREW-GIA---DLYGFGTVLRACSG 273
           +R +FD L  K+ ++ T+++S + Q  + +  + L  +  G A   + +   ++L+ACS 
Sbjct: 108 ARALFDALPFKDVIAWTSIISGHVQKAQPKTAVHLFLQMLGQAIEPNAFTLSSILKACSQ 167

Query: 272 LAAVKQGKEVHCQ-YVRKGGWKDVIIESALVDLYAKCGCVDFARSVFESMEVRNLITWNT 96
           L  +  GK +H   ++R     + ++  AL+D+Y +   VD AR VF+ +   + + W  
Sbjct: 168 LENLHLGKTLHAVVFIRGFHSNNNVVACALIDMYGRSRVVDDARKVFDELPEPDYVCWTA 227

Query: 95  MISGLAQNGRGKEALALFEVMIKDGI 18
           +IS LA+N R +EA+ +F  M   G+
Sbjct: 228 VISTLARNDRFREAVRVFFAMHDGGL 253


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  262 bits (669), Expect = 6e-68
 Identities = 134/263 (50%), Positives = 174/263 (66%), Gaps = 24/263 (9%)
 Frame = -3

Query: 719 LIDMYGWSRAAGDARRVFDELPESDDDLVCWTAVISAFTQRHVQG--------------- 585
           LIDM+G + A  DAR++FDEL E D   +CWT++ISA T+                    
Sbjct: 202 LIDMHGRNCALDDARQLFDELLEPD--AICWTSIISALTRNDFFDEALRFFYSMQRDHGM 259

Query: 584 -------GNAVILCCA*G--SQGKEVHXXXXXXXXXXXXXXXXXXLDMYGKCGSVKHSRI 432
                  G  +  C   G   QGKEVH                  +DMYGKCGSV  S+ 
Sbjct: 260 CPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQR 319

Query: 431 VFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREWGIADLYGFGTVLRACSGLAAVKQG 252
           +FDR+  KNSVS +A+L  YCQN ++++V+ + R+    DLY FGT+LR C+GLAAV+QG
Sbjct: 320 IFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQG 379

Query: 251 KEVHCQYVRKGGWKDVIIESALVDLYAKCGCVDFARSVFESMEVRNLITWNTMISGLAQN 72
           KEVHCQY+RKGGW+DVI+ESALVDLYAKCGC+++A+++F+ M VRNLITWN+MI G AQN
Sbjct: 380 KEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQN 439

Query: 71  GRGKEALALFEVMIKDGIKPDYI 3
           GRG+EAL +F  M+K+GIKPDYI
Sbjct: 440 GRGEEALRIFNQMVKEGIKPDYI 462



 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 25/227 (11%)
 Frame = -3

Query: 719 LIDMYGWSRAAGDARRVFDELPESDDDLVCWTAVISAFTQ-----------RHVQG---- 585
           L+DMYG   + G+++R+FD +P  +   V W+A++  + Q           R ++     
Sbjct: 304 LVDMYGKCGSVGESQRIFDRMPIKNS--VSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY 361

Query: 584 --GNAVILCCA*GS--QGKEVHXXXXXXXXXXXXXXXXXXLDMYGKCGSVKHSRIVFDRL 417
             G  +  C    +  QGKEVH                  +D+Y KCG +++++ +FD++
Sbjct: 362 CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQM 421

Query: 416 SDKNSVSCTAMLSTYCQNKEYEAVL----DLVREWGIADLYGFGTVLRACSGLAAVKQGK 249
             +N ++  +M+  + QN   E  L     +V+E    D   F  +L ACS    V +G+
Sbjct: 422 PVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGR 481

Query: 248 EVHCQYVRKGGWKDVIIE--SALVDLYAKCGCVDFARSVFESMEVRN 114
           E      +  G K V IE  S +VDL  + G ++ A  + E+ + R+
Sbjct: 482 EYFISMTKDYGIK-VGIEHYSCMVDLLGRAGLLEEAEILIETSDFRD 527



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
 Frame = -3

Query: 470 MYGKCGS-VKHSRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDL---VREWGIA-DLY 306
           +Y K G+    +R VFD L  K+ +S T+M+S Y +  +    L+L   +  +G+  + +
Sbjct: 103 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 162

Query: 305 GFGTVLRACSGLAAVKQGKEVHCQYVRKGGWKDVIIESALVDLYAKCGCVDFARSVFESM 126
               V++ACS L  +K G+  H   + +G   + +I SAL+D++ +   +D AR +F+ +
Sbjct: 163 TLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL 222

Query: 125 EVRNLITWNTMISGLAQNGRGKEALALFEVMIKD-GIKPD 9
              + I W ++IS L +N    EAL  F  M +D G+ PD
Sbjct: 223 LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPD 262


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  262 bits (669), Expect = 6e-68
 Identities = 134/263 (50%), Positives = 174/263 (66%), Gaps = 24/263 (9%)
 Frame = -3

Query: 719  LIDMYGWSRAAGDARRVFDELPESDDDLVCWTAVISAFTQRHVQG--------------- 585
            LIDM+G + A  DAR++FDEL E D   +CWT++ISA T+                    
Sbjct: 261  LIDMHGRNCALDDARQLFDELLEPD--AICWTSIISALTRNDFFDEALRFFYSMQRDHGM 318

Query: 584  -------GNAVILCCA*G--SQGKEVHXXXXXXXXXXXXXXXXXXLDMYGKCGSVKHSRI 432
                   G  +  C   G   QGKEVH                  +DMYGKCGSV  S+ 
Sbjct: 319  CPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQR 378

Query: 431  VFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREWGIADLYGFGTVLRACSGLAAVKQG 252
            +FDR+  KNSVS +A+L  YCQN ++++V+ + R+    DLY FGT+LR C+GLAAV+QG
Sbjct: 379  IFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQG 438

Query: 251  KEVHCQYVRKGGWKDVIIESALVDLYAKCGCVDFARSVFESMEVRNLITWNTMISGLAQN 72
            KEVHCQY+RKGGW+DVI+ESALVDLYAKCGC+++A+++F+ M VRNLITWN+MI G AQN
Sbjct: 439  KEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQN 498

Query: 71   GRGKEALALFEVMIKDGIKPDYI 3
            GRG+EAL +F  M+K+GIKPDYI
Sbjct: 499  GRGEEALRIFNQMVKEGIKPDYI 521



 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 25/227 (11%)
 Frame = -3

Query: 719  LIDMYGWSRAAGDARRVFDELPESDDDLVCWTAVISAFTQ-----------RHVQG---- 585
            L+DMYG   + G+++R+FD +P  +   V W+A++  + Q           R ++     
Sbjct: 363  LVDMYGKCGSVGESQRIFDRMPIKNS--VSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY 420

Query: 584  --GNAVILCCA*GS--QGKEVHXXXXXXXXXXXXXXXXXXLDMYGKCGSVKHSRIVFDRL 417
              G  +  C    +  QGKEVH                  +D+Y KCG +++++ +FD++
Sbjct: 421  CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQM 480

Query: 416  SDKNSVSCTAMLSTYCQNKEYEAVL----DLVREWGIADLYGFGTVLRACSGLAAVKQGK 249
              +N ++  +M+  + QN   E  L     +V+E    D   F  +L ACS    V +G+
Sbjct: 481  PVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGR 540

Query: 248  EVHCQYVRKGGWKDVIIE--SALVDLYAKCGCVDFARSVFESMEVRN 114
            E      +  G K V IE  S +VDL  + G ++ A  + E+ + R+
Sbjct: 541  EYFISMTKDYGIK-VGIEHYSCMVDLLGRAGLLEEAEILIETSDFRD 586



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
 Frame = -3

Query: 470 MYGKCGS-VKHSRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDL---VREWGIA-DLY 306
           +Y K G+    +R VFD L  K+ +S T+M+S Y +  +    L+L   +  +G+  + +
Sbjct: 162 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 221

Query: 305 GFGTVLRACSGLAAVKQGKEVHCQYVRKGGWKDVIIESALVDLYAKCGCVDFARSVFESM 126
               V++ACS L  +K G+  H   + +G   + +I SAL+D++ +   +D AR +F+ +
Sbjct: 222 TLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL 281

Query: 125 EVRNLITWNTMISGLAQNGRGKEALALFEVMIKD-GIKPD 9
              + I W ++IS L +N    EAL  F  M +D G+ PD
Sbjct: 282 LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPD 321


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  261 bits (666), Expect = 1e-67
 Identities = 141/264 (53%), Positives = 174/264 (65%), Gaps = 25/264 (9%)
 Frame = -3

Query: 719 LIDMYGWSRAAGDARRVFDELPESDDDLVCWTAVISAFTQRHV----------------- 591
           LID+YG +    DARR+FDEL E D   +CWT+VISA+T+  +                 
Sbjct: 194 LIDLYGRNYELDDARRLFDELLEPD--AICWTSVISAYTRNDMYDKALGFFYLMQRKLGL 251

Query: 590 --QGGNAVILCCA*GS-----QGKEVHXXXXXXXXXXXXXXXXXXLDMYGKCGSVKHSRI 432
              G     +  A G+     QGKEVH                  +DMYGKCG V  S+ 
Sbjct: 252 APDGFTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGKCGLVDESQR 311

Query: 431 VFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREWGIAD-LYGFGTVLRACSGLAAVKQ 255
           VFDR+S KNSVS +A+L  +CQN ++E+V+ + RE G AD LY FGTVLRAC+GLAAV+Q
Sbjct: 312 VFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREMGEADDLYSFGTVLRACAGLAAVRQ 371

Query: 254 GKEVHCQYVRKGGWKDVIIESALVDLYAKCGCVDFARSVFESMEVRNLITWNTMISGLAQ 75
           GKEVHCQYVR+GGW+DVIIESALVDLYAKCGC+DFA  +F  M VRNLITWN+MI G AQ
Sbjct: 372 GKEVHCQYVRRGGWRDVIIESALVDLYAKCGCIDFAHRIFTKMTVRNLITWNSMICGFAQ 431

Query: 74  NGRGKEALALFEVMIKDGIKPDYI 3
           NG  +EAL +F+ M+K+G KPDYI
Sbjct: 432 NGWAEEALRIFDEMVKEGTKPDYI 455



 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
 Frame = -3

Query: 440 SRIVFDRLSDKNSVSCTAMLSTYCQNKEYEAVLDLVREWGIADL------YGFGTVLRAC 279
           +R VFD L  ++ +S T+M++ Y + ++ +  LDL   W + D+      +    V++AC
Sbjct: 106 TRRVFDGLYFRDVISWTSMITGYVKGEKPKKALDLF--WEMLDVGVDPNAFTLSAVIKAC 163

Query: 278 SGLAAVKQGKEVHCQYVRKGGWKDVIIESALVDLYAKCGCVDFARSVFESMEVRNLITWN 99
           + L  +  GK  HC  + +G   + +I SAL+DLY +   +D AR +F+ +   + I W 
Sbjct: 164 TDLGTLMLGKCFHCVIMIRGFHSNHVIGSALIDLYGRNYELDDARRLFDELLEPDAICWT 223

Query: 98  TMISGLAQNGRGKEALALFEVM-IKDGIKPD 9
           ++IS   +N    +AL  F +M  K G+ PD
Sbjct: 224 SVISAYTRNDMYDKALGFFYLMQRKLGLAPD 254



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 24/189 (12%)
 Frame = -3

Query: 719 LIDMYGWSRAAGDARRVFDELPESDDDLVCWTAVISAFTQR-----------------HV 591
           L+DMYG      +++RVFD +  S  + V W+A++  F Q                   +
Sbjct: 296 LVDMYGKCGLVDESQRVFDRM--SVKNSVSWSALLGGFCQNGDFESVIRIFREMGEADDL 353

Query: 590 QGGNAVILCCA*GS---QGKEVHXXXXXXXXXXXXXXXXXXLDMYGKCGSVKHSRIVFDR 420
                V+  CA  +   QGKEVH                  +D+Y KCG +  +  +F +
Sbjct: 354 YSFGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCIDFAHRIFTK 413

Query: 419 LSDKNSVSCTAMLSTYCQNKEYEAVL----DLVREWGIADLYGFGTVLRACSGLAAVKQG 252
           ++ +N ++  +M+  + QN   E  L    ++V+E    D   F  VL ACS        
Sbjct: 414 MTVRNLITWNSMICGFAQNGWAEEALRIFDEMVKEGTKPDYITFIGVLFACSHTDREPLA 473

Query: 251 KEVHCQYVR 225
           K + C  VR
Sbjct: 474 KGILCYDVR 482