BLASTX nr result

ID: Glycyrrhiza23_contig00022322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022322
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530386.1| PREDICTED: potassium channel KAT1-like [Glyc...   132   3e-29
ref|XP_003628261.1| Potassium channel KAT1 [Medicago truncatula]...    86   4e-15
ref|XP_003638588.1| Inward rectifying potassium channel [Medicag...    86   4e-15
ref|XP_003593936.1| Potassium channel [Medicago truncatula] gi|3...    62   4e-08

>ref|XP_003530386.1| PREDICTED: potassium channel KAT1-like [Glycine max]
          Length = 728

 Score =  132 bits (332), Expect = 3e-29
 Identities = 70/108 (64%), Positives = 78/108 (72%), Gaps = 8/108 (7%)
 Frame = -1

Query: 303 EYPPMDPGLALQYGMHDGNNTRGCSCHACTNNPHGEARLHDMIPEDGKRDLYDAAAH--- 133
           EYPP DPG+   Y MHD +NT G    A TNN HGEARLH++IPEDGKRD +D   +   
Sbjct: 506 EYPPRDPGMP-HYQMHDWDNTGGRFSDASTNNSHGEARLHNLIPEDGKRDPHDTVHNDHP 564

Query: 132 -REANEKNLSPIRWKQKALIDQQQNKS----SMNLENGKTLDEHIIEF 4
             EANEKN SPIRWKQK L+DQQQNKS    +MN EN KTLDEHIIEF
Sbjct: 565 DMEANEKNQSPIRWKQKPLVDQQQNKSISDLAMNYENRKTLDEHIIEF 612


>ref|XP_003628261.1| Potassium channel KAT1 [Medicago truncatula]
           gi|355522283|gb|AET02737.1| Potassium channel KAT1
           [Medicago truncatula]
          Length = 253

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/83 (56%), Positives = 55/83 (66%)
 Frame = -1

Query: 252 GNNTRGCSCHACTNNPHGEARLHDMIPEDGKRDLYDAAAHREANEKNLSPIRWKQKALID 73
           GNNTR  S    T N HGE  LHDMIP     ++ +    +EANEK LSP+RWKQK   D
Sbjct: 51  GNNTRRNSHDEFTKNSHGEDILHDMIP-----NMIENQPEKEANEKKLSPVRWKQKDQED 105

Query: 72  QQQNKSSMNLENGKTLDEHIIEF 4
           +QQNKS    ENG+TLDEHII+F
Sbjct: 106 KQQNKSH---ENGQTLDEHIIDF 125


>ref|XP_003638588.1| Inward rectifying potassium channel [Medicago truncatula]
           gi|355504523|gb|AES85726.1| Inward rectifying potassium
           channel [Medicago truncatula]
          Length = 678

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/83 (56%), Positives = 55/83 (66%)
 Frame = -1

Query: 252 GNNTRGCSCHACTNNPHGEARLHDMIPEDGKRDLYDAAAHREANEKNLSPIRWKQKALID 73
           GNNTR  S    T N HGE  LHDMIP     ++ +    +EANEK LSP+RWKQK   D
Sbjct: 510 GNNTRRNSHDEFTKNSHGEDILHDMIP-----NMIENQPEKEANEKKLSPVRWKQKDQED 564

Query: 72  QQQNKSSMNLENGKTLDEHIIEF 4
           +QQNKS    ENG+TLDEHII+F
Sbjct: 565 KQQNKSH---ENGQTLDEHIIDF 584


>ref|XP_003593936.1| Potassium channel [Medicago truncatula] gi|355482984|gb|AES64187.1|
           Potassium channel [Medicago truncatula]
          Length = 786

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 43/142 (30%)
 Frame = -1

Query: 303 EYPPMDPGLALQYGMHDGNNTRGCSCHACTNNPHGEARLHD------------------- 181
           EYP  D GL L   +    NT+  S    TNN HG + +H+                   
Sbjct: 513 EYPHTDHGLVLYKLL---GNTKESSSQESTNNLHGHSLMHEGENINIRDSQNNLHIVTND 569

Query: 180 ------MIPEDGKRDLYDAAA--------------HREANEKNLSPIRWKQKALIDQQQN 61
                 MIPEDGKRDL+ A                 R+A  KN + I W QKAL+ Q +N
Sbjct: 570 VSVPNNMIPEDGKRDLHAAVLPVHKGKLDIVEILIERDAKSKNPNTIGWTQKALVQQLKN 629

Query: 60  KS----SMNLENGKTLDEHIIE 7
           KS    +M  E+ K  DEH IE
Sbjct: 630 KSISDHTMYYESEKKSDEHRIE 651


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