BLASTX nr result
ID: Glycyrrhiza23_contig00022303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00022303
(643 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated... 370 e-100
ref|XP_003601650.1| Small subunit processome component-like prot... 342 4e-92
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255... 315 4e-84
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 307 1e-81
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] 307 1e-81
>ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Glycine
max]
Length = 2653
Score = 370 bits (949), Expect = e-100
Identities = 191/213 (89%), Positives = 199/213 (93%)
Frame = +1
Query: 1 LDLESNPSLVALSLLKGIVSRKLVVPEIYDLVTRVAELMVTSQMESIRKKCSKILLQFLL 180
LDLE NPSLVALSLLKGIVSRK+VVPEIYDLVT VAELMVTSQME +RKKCSKILLQFLL
Sbjct: 2097 LDLEKNPSLVALSLLKGIVSRKMVVPEIYDLVTTVAELMVTSQMEPVRKKCSKILLQFLL 2156
Query: 181 DYRLSEKRLQQHLDFLLSNLRYEHSTGRESVLEMIHAIIVKFPKSVLDEQSQTLFVHLVA 360
DYRLSEKRLQQHLDFLLSNLRYEHSTGRESVLEMIHAIIVKFP+SVLDEQS LFVHLVA
Sbjct: 2157 DYRLSEKRLQQHLDFLLSNLRYEHSTGRESVLEMIHAIIVKFPRSVLDEQSHILFVHLVA 2216
Query: 361 CLANDNDNIVRSMSGAAIKKLIGCVSPNALNSILKYALSWYLGGKQQLWGAAAQVLGLLI 540
CLANDNDNIVRSMSGAAIKKLI VSPN+L SIL+YALSWYLGGKQQLWGAAAQVLGLLI
Sbjct: 2217 CLANDNDNIVRSMSGAAIKKLISSVSPNSLKSILEYALSWYLGGKQQLWGAAAQVLGLLI 2276
Query: 541 EVIKKGFLKHIDCILPVTYRILQSAIDEVTNRQ 639
EV KKGF +HI+CILPVT IL SA+D VTNRQ
Sbjct: 2277 EVKKKGFQEHINCILPVTKHILHSAVDAVTNRQ 2309
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
gi|355490698|gb|AES71901.1| Small subunit processome
component-like protein [Medicago truncatula]
Length = 2733
Score = 342 bits (877), Expect = 4e-92
Identities = 186/230 (80%), Positives = 197/230 (85%), Gaps = 18/230 (7%)
Frame = +1
Query: 1 LDLESNPSLVALSLLKGIVSRKLV-VPEIYDLVTRVAELMVTSQMESIRKKCSKILLQFL 177
LDLE NPSLVALSLLK IV RKL VPEIYD+VTRVAELMVTSQMESIRKKCSKILLQFL
Sbjct: 2154 LDLERNPSLVALSLLKSIVKRKLDDVPEIYDIVTRVAELMVTSQMESIRKKCSKILLQFL 2213
Query: 178 LDYRLSEKRLQQHLDFLLSNLRYEHSTGRESVLEMIHAIIVKFPKSVLDEQSQTLFVHLV 357
LDYRLS+KRLQQHLDFLLSNL YEHSTGRESVLEMI+AIIVKFP ++LDEQSQT F+HLV
Sbjct: 2214 LDYRLSQKRLQQHLDFLLSNLSYEHSTGRESVLEMINAIIVKFPPNILDEQSQTFFLHLV 2273
Query: 358 ACLANDNDNIVRSMSGAAIKKLIGCVSPNALNSILKYALSWYLGGKQQLWGAAAQ----- 522
LAND+D+IVRSMSGAAIKKLIG VSPN+L+SILKY LSWYLG KQQLWGAAAQ
Sbjct: 2274 VRLANDSDDIVRSMSGAAIKKLIGSVSPNSLDSILKYTLSWYLGDKQQLWGAAAQSWCPY 2333
Query: 523 ------------VLGLLIEVIKKGFLKHIDCILPVTYRILQSAIDEVTNR 636
VLGLLIEVIKKGFLKHIDCILPVT RILQSA+ VTNR
Sbjct: 2334 GFAKVESFSAEWVLGLLIEVIKKGFLKHIDCILPVTCRILQSALHAVTNR 2383
>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
Length = 3196
Score = 315 bits (808), Expect = 4e-84
Identities = 159/214 (74%), Positives = 186/214 (86%)
Frame = +1
Query: 1 LDLESNPSLVALSLLKGIVSRKLVVPEIYDLVTRVAELMVTSQMESIRKKCSKILLQFLL 180
+DLE NPS +ALSLLK I+SRKLVV EIYD+VTRVAELMVTSQ+E IRKKCS+ILLQFLL
Sbjct: 1642 VDLERNPSFIALSLLKAIISRKLVVHEIYDVVTRVAELMVTSQVEPIRKKCSQILLQFLL 1701
Query: 181 DYRLSEKRLQQHLDFLLSNLRYEHSTGRESVLEMIHAIIVKFPKSVLDEQSQTLFVHLVA 360
DY LSEKRLQQHLDFLL+NLRYEHSTGRE+VLEMIH II+KFPKS++DEQSQTLFVHLV
Sbjct: 1702 DYHLSEKRLQQHLDFLLANLRYEHSTGRETVLEMIHTIIIKFPKSIVDEQSQTLFVHLVV 1761
Query: 361 CLANDNDNIVRSMSGAAIKKLIGCVSPNALNSILKYALSWYLGGKQQLWGAAAQVLGLLI 540
CL ND DN VRSM GAAIK LIG +SP++L+ I++Y+LSWYLG KQQLW AAAQVLG +I
Sbjct: 1762 CLTNDQDNKVRSMIGAAIKLLIGRISPHSLHPIIEYSLSWYLGEKQQLWSAAAQVLGFMI 1821
Query: 541 EVIKKGFLKHIDCILPVTYRILQSAIDEVTNRQV 642
EV+KKGF +HI+ +LPV IL+ A+ T+ Q+
Sbjct: 1822 EVMKKGFQRHIESVLPVMRSILRLAVKCGTDNQL 1855
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 307 bits (786), Expect = 1e-81
Identities = 157/214 (73%), Positives = 185/214 (86%)
Frame = +1
Query: 1 LDLESNPSLVALSLLKGIVSRKLVVPEIYDLVTRVAELMVTSQMESIRKKCSKILLQFLL 180
+DLE NPS +ALSLLK I+SRKLVV EIYD+VTRVAELMVTSQ+E IRKKCS+ILLQFLL
Sbjct: 2074 VDLERNPSFIALSLLKAIISRKLVVHEIYDVVTRVAELMVTSQVEPIRKKCSQILLQFLL 2133
Query: 181 DYRLSEKRLQQHLDFLLSNLRYEHSTGRESVLEMIHAIIVKFPKSVLDEQSQTLFVHLVA 360
DY LSEKRLQQHLDFLL+NLR +HSTGRE+VLEMIH II+KFPKS++DEQSQTLFVHLV
Sbjct: 2134 DYHLSEKRLQQHLDFLLANLR-QHSTGRETVLEMIHTIIIKFPKSIVDEQSQTLFVHLVV 2192
Query: 361 CLANDNDNIVRSMSGAAIKKLIGCVSPNALNSILKYALSWYLGGKQQLWGAAAQVLGLLI 540
CL ND DN VRSM GAAIK LIG +SP++L+ I++Y+LSWYLG KQQLW AAAQVLG +I
Sbjct: 2193 CLTNDQDNKVRSMIGAAIKLLIGRISPHSLHPIIEYSLSWYLGEKQQLWSAAAQVLGFMI 2252
Query: 541 EVIKKGFLKHIDCILPVTYRILQSAIDEVTNRQV 642
EV+KKGF +HI+ +LPV IL+ A+ T+ Q+
Sbjct: 2253 EVMKKGFQRHIESVLPVMRSILRLAVKCGTDNQL 2286
>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
Length = 2461
Score = 307 bits (786), Expect = 1e-81
Identities = 157/214 (73%), Positives = 185/214 (86%)
Frame = +1
Query: 1 LDLESNPSLVALSLLKGIVSRKLVVPEIYDLVTRVAELMVTSQMESIRKKCSKILLQFLL 180
+DLE NPS +ALSLLK I+SRKLVV EIYD+VTRVAELMVTSQ+E IRKKCS+ILLQFLL
Sbjct: 1906 VDLERNPSFIALSLLKAIISRKLVVHEIYDVVTRVAELMVTSQVEPIRKKCSQILLQFLL 1965
Query: 181 DYRLSEKRLQQHLDFLLSNLRYEHSTGRESVLEMIHAIIVKFPKSVLDEQSQTLFVHLVA 360
DY LSEKRLQQHLDFLL+NLR +HSTGRE+VLEMIH II+KFPKS++DEQSQTLFVHLV
Sbjct: 1966 DYHLSEKRLQQHLDFLLANLR-QHSTGREAVLEMIHTIIIKFPKSIVDEQSQTLFVHLVV 2024
Query: 361 CLANDNDNIVRSMSGAAIKKLIGCVSPNALNSILKYALSWYLGGKQQLWGAAAQVLGLLI 540
CL ND DN VRSM GAAIK LIG +SP++L+ I++Y+LSWYLG KQQLW AAAQVLG +I
Sbjct: 2025 CLTNDQDNKVRSMIGAAIKLLIGRISPHSLHPIIEYSLSWYLGEKQQLWSAAAQVLGFMI 2084
Query: 541 EVIKKGFLKHIDCILPVTYRILQSAIDEVTNRQV 642
EV+KKGF +HI+ +LPV IL+ A+ T+ Q+
Sbjct: 2085 EVMKKGFQRHIESVLPVMRSILRLAVKCGTDNQL 2118