BLASTX nr result

ID: Glycyrrhiza23_contig00022211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022211
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621717.1| F-box protein [Medicago truncatula] gi|35549...   110   9e-23
ref|XP_003621713.1| F-box/LRR-repeat protein [Medicago truncatul...   103   2e-20
ref|XP_003603392.1| F-box/LRR-repeat protein [Medicago truncatul...    92   6e-17
gb|AFK35052.1| unknown [Lotus japonicus]                               91   1e-16
ref|XP_003610961.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    86   4e-15

>ref|XP_003621717.1| F-box protein [Medicago truncatula] gi|355496732|gb|AES77935.1|
           F-box protein [Medicago truncatula]
          Length = 431

 Score =  110 bits (276), Expect = 9e-23
 Identities = 64/144 (44%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
 Frame = +3

Query: 3   DISKSNID---LPFKALCNAEFLRADVGFFFKPYS--FLNMTYMELIFQP-HYWVVLIDL 164
           DIS S I    LP K   N  FLR+ +    +     FL++T+++L F   +YW+ LI  
Sbjct: 256 DISDSCISPLLLPLKLFYNVHFLRSQLQTLEEQQDTQFLSLTHLDLSFDHGYYWISLIKF 315

Query: 165 LRSCPSLQNLVIDKNEGTFDLSSRSDDKNWVQPHFVPECLKTQLKRFSVRKYGGLESELQ 344
           + +CPSLQ L I K  G + L S  D  NW  P FVP+C+ + L+ FS   YGG  SELQ
Sbjct: 316 ICACPSLQTLTIRKIGGGYGLLSNDDHNNWPHPQFVPQCISSHLQMFSFINYGGNLSELQ 375

Query: 345 FTSYVMQNARVLRGVRICSTTSSS 416
           FT YV+QNA +LR V I   TSS+
Sbjct: 376 FTKYVVQNATLLRNVTIYRNTSSN 399


>ref|XP_003621713.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355496728|gb|AES77931.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 294

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/134 (44%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
 Frame = +3

Query: 3   DISKSNID---LPFKALCNAEFLRADVGFFFKPYS--FLNMTYMELIFQP-HYWVVLIDL 164
           DIS S I    LP K   N  FLR+ +    +     FL++T+++L F   +YW+ LI  
Sbjct: 117 DISDSCISPLLLPLKLFYNVHFLRSQLQTLEEQQDTQFLSLTHLDLSFDHGYYWISLIKF 176

Query: 165 LRSCPSLQNLVIDKNEGTFDLSSRSDDKNWVQPHFVPECLKTQLKRFSVRKYGGLESELQ 344
           + +CPSLQ L I K  G + L S  D  NW  P FVP+C+ + L+ FS   YGG  SELQ
Sbjct: 177 ICACPSLQTLTIRKIGGGYGLLSNDDHNNWPHPQFVPQCISSHLQMFSFINYGGNLSELQ 236

Query: 345 FTSYVMQNARVLRG 386
           FT YV+QNA +L G
Sbjct: 237 FTKYVVQNATLLIG 250


>ref|XP_003603392.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355492440|gb|AES73643.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 408

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
 Frame = +3

Query: 24  DLPFKALCNAEFLRADVGFFFKPYS----FLNMTYMELIFQPHYWVVLIDLLRSCPSLQN 191
           D P KALCN EFL   +   ++P+     F N+ +++L+   + W +L+ +L  CP LQ 
Sbjct: 231 DFPLKALCNVEFLCIQIDEMYRPHDEIPIFHNLAHLKLLSLNYNWKLLVHVLCHCPKLQK 290

Query: 192 LVIDKNEGTFDLSSRSDDKNWVQPHFVPECLKTQLKRFSVRKYGGLESELQFTSYVMQNA 371
           L  D +E T D       +NWV P FVP C+   L+  ++ ++ GL  EL    Y+++NA
Sbjct: 291 L--DLSEATEDCMIPDVQENWVDPEFVPHCISLNLRTCTLLRFKGLHGELLMAKYILKNA 348

Query: 372 RVLRGVRI 395
           RVL+ + I
Sbjct: 349 RVLQTMTI 356


>gb|AFK35052.1| unknown [Lotus japonicus]
          Length = 220

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
 Frame = +3

Query: 27  LPFKALCNAEFL---RADVGFFFKPYSFLNMTYMELIFQPHY--WVVLIDLLRSCPSLQN 191
           +P KA  NA+FL   + D G    P    N+TY+E+ F+ H   W +++D+L  CP LQ 
Sbjct: 72  IPVKAFSNAQFLHLNKCDAGIPVFP----NLTYLEISFKRHSLKWNLVLDMLNHCPKLQT 127

Query: 192 LVIDKNEGTFDLSSRSDDKNWVQPHFVPECLKTQLKRFSVRKYGGLESELQFTSYVMQNA 371
           +V D            DD+ W  P F+P+C  T L++  ++ Y G++ +++F  YV+QNA
Sbjct: 128 VVFDIR--------LDDDEVWPDPGFIPKCFSTHLRKCFIKGYAGVDCQMRFARYVLQNA 179

Query: 372 RVLRGVRICSTTSSSN 419
            +LR + ICS  S ++
Sbjct: 180 TLLRSLIICSRYSQNH 195


>ref|XP_003610961.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355512296|gb|AES93919.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 378

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 4/137 (2%)
 Frame = +3

Query: 6   ISKSNIDLPFKALCNAEFLRADVGFFFKPYSFLNMTYM----ELIFQPHYWVVLIDLLRS 173
           IS+ +  LP   LCNA+FL A V ++    +F N+ +M    ELI     W     +L++
Sbjct: 205 ISELHSMLPL--LCNAQFLYAGVSYWCCNPTFHNLIHMDITLELISCDVMWNWFAQVLQN 262

Query: 174 CPSLQNLVIDKNEGTFDLSSRSDDKNWVQPHFVPECLKTQLKRFSVRKYGGLESELQFTS 353
           CP+LQNL + K      +    +D +W  P  +P+CL ++LK F  + +   + E+QF  
Sbjct: 263 CPNLQNLTVQKKYAC--VKKHGNDVHWKDPQIIPQCLSSRLKTFKFKSFNDFDCEVQFAK 320

Query: 354 YVMQNARVLRGVRICST 404
           Y+MQN++VL+ + I +T
Sbjct: 321 YIMQNSKVLQNMTIHTT 337


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