BLASTX nr result

ID: Glycyrrhiza23_contig00022206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022206
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554765.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   121   3e-53
ref|XP_003521810.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   121   3e-53
gb|ACU23787.1| unknown [Glycine max]                                  121   2e-52
gb|AFK33333.1| unknown [Lotus japonicus]                              121   2e-52
emb|CCG06551.1| E3 ubiquitin ligase [Lotus japonicus]                 121   2e-52

>ref|XP_003554765.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Glycine max]
          Length = 314

 Score =  121 bits (304), Expect(2) = 3e-53
 Identities = 58/60 (96%), Positives = 59/60 (98%)
 Frame = +2

Query: 242 GGNGRKLTFEGSPRSIRDSHKKVKDSHDGLIIYRNMALFFSCGDRKELKLRVTGRIWKEQ 421
           GGNGRKLTFEGSPRSIRDSHKKV+DSHDGLIIYRNMALFFS GDRKELKLRVTGRIWKEQ
Sbjct: 241 GGNGRKLTFEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQ 300



 Score =  112 bits (279), Expect(2) = 3e-53
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 150
           RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG
Sbjct: 177 RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 226


>ref|XP_003521810.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Glycine max]
          Length = 311

 Score =  121 bits (304), Expect(2) = 3e-53
 Identities = 58/60 (96%), Positives = 59/60 (98%)
 Frame = +2

Query: 242 GGNGRKLTFEGSPRSIRDSHKKVKDSHDGLIIYRNMALFFSCGDRKELKLRVTGRIWKEQ 421
           GGNGRKLTFEGSPRSIRDSHKKV+DSHDGLIIYRNMALFFS GDRKELKLRVTGRIWKEQ
Sbjct: 238 GGNGRKLTFEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQ 297



 Score =  112 bits (279), Expect(2) = 3e-53
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 150
           RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG
Sbjct: 174 RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 223


>gb|ACU23787.1| unknown [Glycine max]
          Length = 314

 Score =  121 bits (304), Expect(2) = 2e-52
 Identities = 58/60 (96%), Positives = 59/60 (98%)
 Frame = +2

Query: 242 GGNGRKLTFEGSPRSIRDSHKKVKDSHDGLIIYRNMALFFSCGDRKELKLRVTGRIWKEQ 421
           GGNGRKLTFEGSPRSIRDSHKKV+DSHDGLIIYRNMALFFS GDRKELKLRVTGRIWKEQ
Sbjct: 241 GGNGRKLTFEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQ 300



 Score =  109 bits (273), Expect(2) = 2e-52
 Identities = 49/50 (98%), Positives = 49/50 (98%)
 Frame = +1

Query: 1   RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 150
           RYVKSNPMEVENATWML VFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG
Sbjct: 177 RYVKSNPMEVENATWMLMVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 226


>gb|AFK33333.1| unknown [Lotus japonicus]
          Length = 306

 Score =  121 bits (304), Expect(2) = 2e-52
 Identities = 58/60 (96%), Positives = 59/60 (98%)
 Frame = +2

Query: 242 GGNGRKLTFEGSPRSIRDSHKKVKDSHDGLIIYRNMALFFSCGDRKELKLRVTGRIWKEQ 421
           GGNGRKLTFEGSPRSIRDSHKKV+DSHDGLIIYRNMALFFS GDRKELKLRVTGRIWKEQ
Sbjct: 233 GGNGRKLTFEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQ 292



 Score =  109 bits (273), Expect(2) = 2e-52
 Identities = 49/50 (98%), Positives = 49/50 (98%)
 Frame = +1

Query: 1   RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 150
           RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLG APVYMAFLRFMG
Sbjct: 169 RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGTAPVYMAFLRFMG 218


>emb|CCG06551.1| E3 ubiquitin ligase [Lotus japonicus]
          Length = 306

 Score =  121 bits (304), Expect(2) = 2e-52
 Identities = 58/60 (96%), Positives = 59/60 (98%)
 Frame = +2

Query: 242 GGNGRKLTFEGSPRSIRDSHKKVKDSHDGLIIYRNMALFFSCGDRKELKLRVTGRIWKEQ 421
           GGNGRKLTFEGSPRSIRDSHKKV+DSHDGLIIYRNMALFFS GDRKELKLRVTGRIWKEQ
Sbjct: 233 GGNGRKLTFEGSPRSIRDSHKKVRDSHDGLIIYRNMALFFSGGDRKELKLRVTGRIWKEQ 292



 Score =  109 bits (273), Expect(2) = 2e-52
 Identities = 49/50 (98%), Positives = 49/50 (98%)
 Frame = +1

Query: 1   RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 150
           RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLG APVYMAFLRFMG
Sbjct: 169 RYVKSNPMEVENATWMLTVFHCFGQYFCLHFEAFQLGTAPVYMAFLRFMG 218


Top