BLASTX nr result

ID: Glycyrrhiza23_contig00022159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022159
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33309.1| Ribonuclease H [Medicago truncatula]                   160   1e-37
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatul...   160   1e-37
ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance prot...   109   2e-22
gb|ABH07384.1| CMR1 [Phaseolus vulgaris]                              109   2e-22
ref|XP_003622506.1| TMV resistance protein N [Medicago truncatul...   109   3e-22

>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/87 (91%), Positives = 82/87 (94%), Gaps = 1/87 (1%)
 Frame = -3

Query: 259 FFKGSTKDYVTQILENCGLNPLIGIDVLIEKSLITYDWWHLGMHDLLQEMGRNIVLHES- 83
           FFKGS KD+VTQILENCGLNPLIGIDVLIEKSLITYD WHLGMHDLLQEMGRNIVLHES 
Sbjct: 309 FFKGSRKDHVTQILENCGLNPLIGIDVLIEKSLITYDGWHLGMHDLLQEMGRNIVLHESL 368

Query: 82  PDASKRSRLWSLKDIDQVLRNNKGTES 2
            DA K+SRLWSLKDIDQVLRNNKGTES
Sbjct: 369 NDAGKQSRLWSLKDIDQVLRNNKGTES 395


>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
           gi|355500090|gb|AES81293.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 1579

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/87 (91%), Positives = 82/87 (94%), Gaps = 1/87 (1%)
 Frame = -3

Query: 259 FFKGSTKDYVTQILENCGLNPLIGIDVLIEKSLITYDWWHLGMHDLLQEMGRNIVLHES- 83
           FFKGS KD+VTQILENCGLNPLIGIDVLIEKSLITYD WHLGMHDLLQEMGRNIVLHES 
Sbjct: 492 FFKGSRKDHVTQILENCGLNPLIGIDVLIEKSLITYDGWHLGMHDLLQEMGRNIVLHESL 551

Query: 82  PDASKRSRLWSLKDIDQVLRNNKGTES 2
            DA K+SRLWSLKDIDQVLRNNKGTES
Sbjct: 552 NDAGKQSRLWSLKDIDQVLRNNKGTES 578


>ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula] gi|355490464|gb|AES71667.1| TIR-NBS-LRR-TIR
           type disease resistance protein [Medicago truncatula]
          Length = 1743

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/86 (62%), Positives = 69/86 (80%), Gaps = 1/86 (1%)
 Frame = -3

Query: 259 FFKGSTKDYVTQILENCGLNPLIGIDVLIEKSLITYDWWHLGMHDLLQEMGRNIVLHESP 80
           FFKG  K  V QILE+CGL+P +GI+VLIEKSL+T+D   + +HD+L+EM + IV+ ESP
Sbjct: 443 FFKGWYKHKVIQILESCGLHPTVGINVLIEKSLLTFDGRVIWLHDMLEEMAKTIVIQESP 502

Query: 79  -DASKRSRLWSLKDIDQVLRNNKGTE 5
            D  +RSRLWSL+DIDQVL+ NKGTE
Sbjct: 503 NDPGRRSRLWSLEDIDQVLKKNKGTE 528


>gb|ABH07384.1| CMR1 [Phaseolus vulgaris]
          Length = 1133

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/88 (67%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
 Frame = -3

Query: 259 FFKGSTKDYVTQILENCGLNPLIGIDVLIEKSLITYDWW--HLGMHDLLQEMGRNIVLHE 86
           FF G   D V  ILENCG +P+IGID+LIE+SL+T D     LGMHDLLQEMGRNIV  E
Sbjct: 445 FFVGMDIDEVVNILENCGDHPIIGIDILIERSLVTLDMTKNKLGMHDLLQEMGRNIVYQE 504

Query: 85  SP-DASKRSRLWSLKDIDQVLRNNKGTE 5
           SP D  KRSRLWS KDID VL  NKGT+
Sbjct: 505 SPNDPGKRSRLWSQKDIDYVLTKNKGTD 532


>ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
           gi|355497521|gb|AES78724.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 1137

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/88 (67%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
 Frame = -3

Query: 259 FFKGSTKDYVTQILENCGLNPLIGIDVLIEKSLITYDWW--HLGMHDLLQEMGRNIVLHE 86
           FFKG   D V +ILE CG +P IGID+LIE+SL T D     L MHDLLQEMGRNIV  E
Sbjct: 453 FFKGMDIDEVIEILEGCGYHPKIGIDILIERSLATLDRGDNKLWMHDLLQEMGRNIVFEE 512

Query: 85  SP-DASKRSRLWSLKDIDQVLRNNKGTE 5
           SP D  KRSRLWS KD+DQVLR NKGT+
Sbjct: 513 SPNDPGKRSRLWSQKDVDQVLRQNKGTD 540


Top