BLASTX nr result

ID: Glycyrrhiza23_contig00022157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022157
         (1292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41357.1| unknown [Medicago truncatula]                          238   3e-60
ref|XP_003626164.1| 50S ribosomal protein L21 [Medicago truncatu...   238   3e-60
ref|XP_003626163.1| 50S ribosomal protein L21 [Medicago truncatu...   238   3e-60
ref|XP_003542747.1| PREDICTED: 50S ribosomal protein L21, mitoch...   222   1e-55
ref|XP_003529325.1| PREDICTED: 50S ribosomal protein L21, mitoch...   214   5e-53

>gb|AFK41357.1| unknown [Medicago truncatula]
          Length = 300

 Score =  238 bits (607), Expect = 3e-60
 Identities = 149/273 (54%), Positives = 160/273 (58%), Gaps = 18/273 (6%)
 Frame = -3

Query: 1233 IRRCLLLQPLTRQAQAXXXXXXXXXXXXXXXXXXXXSVPFFPNANTSSPLLPIFTNSKPT 1054
            IRRCL  Q LTRQ+Q                           N N SSPLLPIFTNSKPT
Sbjct: 15   IRRCL--QALTRQSQPTLSLFKDPLSLRLLSSAALL------NHNISSPLLPIFTNSKPT 66

Query: 1053 SAFAQCSHLRYFSSTKQ------------------GDTTXXXXXXXXXXXXXXXXXXXXD 928
            SAF Q  H RYFSS+KQ                   D                      D
Sbjct: 67   SAFGQWHHGRYFSSSKQDDHIKEGGTHEIGDEDDDSDGDDDDDDDDYDEEEGDYEDEDDD 126

Query: 927  YVSVTSGKRVYTXXXXXXXXXAIGYKVVGPLQKDEQVFKPYEPVFAVVQIGSHQFKVSNG 748
             V+V+S K+VYT         AIGYKVVGPLQK++ VFKPYEP FAVVQIGSHQFKVSNG
Sbjct: 127  TVAVSSRKKVYTEEEKEAEAEAIGYKVVGPLQKNDNVFKPYEPAFAVVQIGSHQFKVSNG 186

Query: 747  DSVFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPDXXXXXXXXXXALDAKVIIFX 568
            DS+FTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPD          ALDAKVIIF 
Sbjct: 187  DSIFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPDGAVHAVVEEHALDAKVIIFK 246

Query: 567  XXXXXXXXXXKGHRQELTKLRIIDIQGIEKPPN 469
                      KGHRQELTKLRI +I+G+EKP N
Sbjct: 247  KKRRKNYRRTKGHRQELTKLRITNIEGVEKPLN 279


>ref|XP_003626164.1| 50S ribosomal protein L21 [Medicago truncatula]
            gi|355501179|gb|AES82382.1| 50S ribosomal protein L21
            [Medicago truncatula]
          Length = 290

 Score =  238 bits (607), Expect = 3e-60
 Identities = 149/273 (54%), Positives = 160/273 (58%), Gaps = 18/273 (6%)
 Frame = -3

Query: 1233 IRRCLLLQPLTRQAQAXXXXXXXXXXXXXXXXXXXXSVPFFPNANTSSPLLPIFTNSKPT 1054
            IRRCL  Q LTRQ+Q                           N N SSPLLPIFTNSKPT
Sbjct: 5    IRRCL--QALTRQSQPTLSLFKDPLSLRLLSSAALL------NHNISSPLLPIFTNSKPT 56

Query: 1053 SAFAQCSHLRYFSSTKQ------------------GDTTXXXXXXXXXXXXXXXXXXXXD 928
            SAF Q  H RYFSS+KQ                   D                      D
Sbjct: 57   SAFGQWHHGRYFSSSKQDDHIKEGGTHEIEDEDDDSDGDDDDDDDDYDEEEGDYEDEDDD 116

Query: 927  YVSVTSGKRVYTXXXXXXXXXAIGYKVVGPLQKDEQVFKPYEPVFAVVQIGSHQFKVSNG 748
             V+V+S K+VYT         AIGYKVVGPLQK++ VFKPYEP FAVVQIGSHQFKVSNG
Sbjct: 117  TVAVSSRKKVYTEEEKEAEAEAIGYKVVGPLQKNDNVFKPYEPAFAVVQIGSHQFKVSNG 176

Query: 747  DSVFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPDXXXXXXXXXXALDAKVIIFX 568
            DS+FTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPD          ALDAKVIIF 
Sbjct: 177  DSIFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPDGAVHAVVEEHALDAKVIIFK 236

Query: 567  XXXXXXXXXXKGHRQELTKLRIIDIQGIEKPPN 469
                      KGHRQELTKLRI +I+G+EKP N
Sbjct: 237  KKRRKNYRRTKGHRQELTKLRITNIEGVEKPLN 269


>ref|XP_003626163.1| 50S ribosomal protein L21 [Medicago truncatula]
            gi|355501178|gb|AES82381.1| 50S ribosomal protein L21
            [Medicago truncatula]
          Length = 300

 Score =  238 bits (607), Expect = 3e-60
 Identities = 149/273 (54%), Positives = 160/273 (58%), Gaps = 18/273 (6%)
 Frame = -3

Query: 1233 IRRCLLLQPLTRQAQAXXXXXXXXXXXXXXXXXXXXSVPFFPNANTSSPLLPIFTNSKPT 1054
            IRRCL  Q LTRQ+Q                           N N SSPLLPIFTNSKPT
Sbjct: 15   IRRCL--QALTRQSQPTLSLFKDPLSLRLLSSAALL------NHNISSPLLPIFTNSKPT 66

Query: 1053 SAFAQCSHLRYFSSTKQ------------------GDTTXXXXXXXXXXXXXXXXXXXXD 928
            SAF Q  H RYFSS+KQ                   D                      D
Sbjct: 67   SAFGQWHHGRYFSSSKQDDHIKEGGTHEIEDEDDDSDGDDDDDDDDYDEEEGDYEDEDDD 126

Query: 927  YVSVTSGKRVYTXXXXXXXXXAIGYKVVGPLQKDEQVFKPYEPVFAVVQIGSHQFKVSNG 748
             V+V+S K+VYT         AIGYKVVGPLQK++ VFKPYEP FAVVQIGSHQFKVSNG
Sbjct: 127  TVAVSSRKKVYTEEEKEAEAEAIGYKVVGPLQKNDNVFKPYEPAFAVVQIGSHQFKVSNG 186

Query: 747  DSVFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPDXXXXXXXXXXALDAKVIIFX 568
            DS+FTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPD          ALDAKVIIF 
Sbjct: 187  DSIFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPDGAVHAVVEEHALDAKVIIFK 246

Query: 567  XXXXXXXXXXKGHRQELTKLRIIDIQGIEKPPN 469
                      KGHRQELTKLRI +I+G+EKP N
Sbjct: 247  KKRRKNYRRTKGHRQELTKLRITNIEGVEKPLN 279


>ref|XP_003542747.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Glycine
            max]
          Length = 267

 Score =  222 bits (566), Expect = 1e-55
 Identities = 134/222 (60%), Positives = 143/222 (64%), Gaps = 4/222 (1%)
 Frame = -3

Query: 1122 VPFFPNANTSSPLLPIFTNSKPTSAFAQCSHLRYFSSTKQGDTTXXXXXXXXXXXXXXXX 943
            VP FPNAN SSP+  +       S FAQ  HLRYFSS K+ D +                
Sbjct: 30   VPPFPNANASSPVFTV-----RASVFAQWPHLRYFSSEKKDDHSDEDDDGDEDYDDEEED 84

Query: 942  XXXXDY---VSVTSGKRVYTXXXXXXXXXAIGYKVVGPLQKDEQ-VFKPYEPVFAVVQIG 775
                D    V V+ GK+VYT         AIGY+VVGPLQKDE  VFKPYEPVFAVVQIG
Sbjct: 85   YVDDDDDDDVPVSRGKKVYTAEEKEAEAAAIGYRVVGPLQKDEDSVFKPYEPVFAVVQIG 144

Query: 774  SHQFKVSNGDSVFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPDXXXXXXXXXXA 595
            SHQFKVSN DS+FTERLKFCEVNDKLILNKVLLLGS SQTI+GRPIVPD          A
Sbjct: 145  SHQFKVSNRDSIFTERLKFCEVNDKLILNKVLLLGSASQTIIGRPIVPDAAVHAVVEEHA 204

Query: 594  LDAKVIIFXXXXXXXXXXXKGHRQELTKLRIIDIQGIEKPPN 469
            LDAKVIIF           KGHRQELTKLRI DIQGIEKP N
Sbjct: 205  LDAKVIIFKKKRRKNYRRTKGHRQELTKLRITDIQGIEKPQN 246


>ref|XP_003529325.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 1
            [Glycine max]
          Length = 262

 Score =  214 bits (544), Expect = 5e-53
 Identities = 129/216 (59%), Positives = 139/216 (64%), Gaps = 1/216 (0%)
 Frame = -3

Query: 1113 FPNANTSSPLLPIFTNSKPTSAFAQCSHLRYFSSTKQGDTTXXXXXXXXXXXXXXXXXXX 934
            FPN+N S         +   S FAQC HLR FSS K+ D +                   
Sbjct: 32   FPNSNASPHAF-----TARASVFAQCPHLRCFSSDKKDDHSDEEDDSDEDYDEEEDYVDD 86

Query: 933  XDYVSVTSGKRVYTXXXXXXXXXAIGYKVVGPLQKDEQ-VFKPYEPVFAVVQIGSHQFKV 757
             D V+V+ GK+VYT         AIGY+VVGPLQK+E  VFKPYEPVFAVVQIGSHQFKV
Sbjct: 87   DD-VTVSRGKKVYTAEEKEAEAAAIGYRVVGPLQKEEDSVFKPYEPVFAVVQIGSHQFKV 145

Query: 756  SNGDSVFTERLKFCEVNDKLILNKVLLLGSPSQTIVGRPIVPDXXXXXXXXXXALDAKVI 577
            SN DS+FTERLKFCEVNDKLILNKVLLLGS SQTIVGRPIVPD          ALDAKVI
Sbjct: 146  SNRDSIFTERLKFCEVNDKLILNKVLLLGSASQTIVGRPIVPDAAVHAVVEEHALDAKVI 205

Query: 576  IFXXXXXXXXXXXKGHRQELTKLRIIDIQGIEKPPN 469
            IF           KGHRQELTKLRI DIQGIEKP N
Sbjct: 206  IFKKKRRKNYRRTKGHRQELTKLRITDIQGIEKPQN 241


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