BLASTX nr result

ID: Glycyrrhiza23_contig00022127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022127
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607061.1| Pentatricopeptide repeat-containing protein,...    69   4e-10
ref|XP_003589556.1| Pentatricopeptide repeat-containing protein ...    69   4e-10
ref|XP_003588289.1| Pentatricopeptide repeat-containing protein ...    69   4e-10
ref|XP_003528385.1| PREDICTED: pentatricopeptide repeat-containi...    55   4e-06

>ref|XP_003607061.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355508116|gb|AES89258.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 767

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/43 (79%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +1

Query: 154 FRFDRSSA-EAERLPRPEVEVKELSDVPELWRRSRVAWLCKEL 279
           F F    A E  RLPRPEVEVKELS+VPELWRRSRVAWLCKEL
Sbjct: 91  FHFSTVEADEKRRLPRPEVEVKELSEVPELWRRSRVAWLCKEL 133


>ref|XP_003589556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478604|gb|AES59807.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 761

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/43 (79%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +1

Query: 154 FRFDRSSA-EAERLPRPEVEVKELSDVPELWRRSRVAWLCKEL 279
           F F    A E  RLPRPEVEVKELS+VPELWRRSRVAWLCKEL
Sbjct: 91  FHFSTVEADEKRRLPRPEVEVKELSEVPELWRRSRVAWLCKEL 133


>ref|XP_003588289.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|357469333|ref|XP_003604951.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|357520985|ref|XP_003630781.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355477337|gb|AES58540.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355506006|gb|AES87148.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355524803|gb|AET05257.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 775

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/43 (79%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
 Frame = +1

Query: 154 FRFDRSSA-EAERLPRPEVEVKELSDVPELWRRSRVAWLCKEL 279
           F F    A E  RLPRPEVEVKELS+VPELWRRSRVAWLCKEL
Sbjct: 91  FHFSTVEADEKRRLPRPEVEVKELSEVPELWRRSRVAWLCKEL 133


>ref|XP_003528385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15820-like [Glycine max]
          Length = 763

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = +1

Query: 169 SSAEAERLPRPEVEVKELSDVPELWRRSRVAWLCKEL 279
           + AEA  L  PEVEV ELS VPE WRR+RVAWLCKEL
Sbjct: 73  AEAEARGLRGPEVEVGELSAVPEEWRRARVAWLCKEL 109