BLASTX nr result

ID: Glycyrrhiza23_contig00022071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022071
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t...   207   5e-52
ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   188   5e-46
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45

>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 738

 Score =  207 bits (528), Expect = 5e-52
 Identities = 98/108 (90%), Positives = 102/108 (94%)
 Frame = +2

Query: 2   EPENPGAFVLLSNIYAGAGRWDDVARVRTRLNDKGMKKVPGCTSIEIDGVVHEFLVGDKL 181
           EPEN GAFVLLSNIYAGAGRWDDVAR+RTRLNDKGMKKVPGCTSIEIDG VHEFLVGDK 
Sbjct: 565 EPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKF 624

Query: 182 HPECEKIYRTLDEVDKLLEENGFVPDTSEVLYDMDEEWKEGALSQHSE 325
           HPEC  IY+ L+EVDKLLEENGFVP+TSEVLYDMDEEWKEGALSQHSE
Sbjct: 625 HPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSE 672


>ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  202 bits (515), Expect = 2e-50
 Identities = 94/108 (87%), Positives = 102/108 (94%)
 Frame = +2

Query: 2   EPENPGAFVLLSNIYAGAGRWDDVARVRTRLNDKGMKKVPGCTSIEIDGVVHEFLVGDKL 181
           EPEN GA+VLLSNIYAGAGRWDDVA++RT+LNDKGMKKVPGCTSIEIDGVVHEFLVGDK 
Sbjct: 563 EPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKF 622

Query: 182 HPECEKIYRTLDEVDKLLEENGFVPDTSEVLYDMDEEWKEGALSQHSE 325
           HP+ E I+R LDEVD+LLEE GFVPDTSEVLYDMDEEWKEGAL+QHSE
Sbjct: 623 HPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSE 670


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  189 bits (479), Expect = 3e-46
 Identities = 87/108 (80%), Positives = 99/108 (91%)
 Frame = +2

Query: 2   EPENPGAFVLLSNIYAGAGRWDDVARVRTRLNDKGMKKVPGCTSIEIDGVVHEFLVGDKL 181
           EP+NPGA+VLLSNIYAGAG+WDDVAR+RTRLND+GMKKVPGCT+IE+D VVHEFLVGDK+
Sbjct: 561 EPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKV 620

Query: 182 HPECEKIYRTLDEVDKLLEENGFVPDTSEVLYDMDEEWKEGALSQHSE 325
           HP+ E IYR L+EVD+ L+  GFV DTSEVLYDMDEEWKEGALS HSE
Sbjct: 621 HPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSE 668


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  188 bits (477), Expect = 5e-46
 Identities = 86/108 (79%), Positives = 99/108 (91%)
 Frame = +2

Query: 2   EPENPGAFVLLSNIYAGAGRWDDVARVRTRLNDKGMKKVPGCTSIEIDGVVHEFLVGDKL 181
           EPENPGA+VLLSNIYA AGRWDDVAR+RT+LNDKGMKKVPGC+SIE+D VVHEFLVGDK+
Sbjct: 565 EPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKV 624

Query: 182 HPECEKIYRTLDEVDKLLEENGFVPDTSEVLYDMDEEWKEGALSQHSE 325
           H + + IY+ LDE+D+LLE+ G VPDTSEVLYDMDEEWKEG+LS HSE
Sbjct: 625 HEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSE 672


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  184 bits (468), Expect = 5e-45
 Identities = 84/108 (77%), Positives = 96/108 (88%)
 Frame = +2

Query: 2   EPENPGAFVLLSNIYAGAGRWDDVARVRTRLNDKGMKKVPGCTSIEIDGVVHEFLVGDKL 181
           EPENP A+VLLSNIYAGAGRW+DVA++RTRLND  MKKVPGC+SIE+D VVHEFLVGDK+
Sbjct: 563 EPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKV 622

Query: 182 HPECEKIYRTLDEVDKLLEENGFVPDTSEVLYDMDEEWKEGALSQHSE 325
           HP+  +IY+ LDE+D  LE+ GFVPDTSEVLYDMDEEWKEG LS HSE
Sbjct: 623 HPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSE 670


Top