BLASTX nr result

ID: Glycyrrhiza23_contig00022040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022040
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-li...   151   5e-35
ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-li...   149   2e-34
ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235...   120   1e-25
ref|XP_004168198.1| PREDICTED: small RNA degrading nuclease 5-li...   114   6e-24
ref|XP_004146782.1| PREDICTED: small RNA degrading nuclease 5-li...   114   6e-24

>ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 576

 Score =  151 bits (382), Expect = 5e-35
 Identities = 76/90 (84%), Positives = 81/90 (90%)
 Frame = -1

Query: 384 GFKLNKSAELKGILARMDTRVHKLYASLPTNAMMIVCTGHGDTAVVRRLRKMLAEENENE 205
           GFKLN SAELK ILARMD R+H LY SLPTNAMMI+CTGHGDTA+VRRLRKML E  +NE
Sbjct: 489 GFKLNASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLTE--QNE 546

Query: 204 SNLCREKIVEILEEFQARAEVALCFVGVKH 115
           SNLCRE+IVEILEE QARAEVALCFVGVKH
Sbjct: 547 SNLCREEIVEILEEVQARAEVALCFVGVKH 576


>ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 567

 Score =  149 bits (376), Expect = 2e-34
 Identities = 75/89 (84%), Positives = 80/89 (89%)
 Frame = -1

Query: 381 FKLNKSAELKGILARMDTRVHKLYASLPTNAMMIVCTGHGDTAVVRRLRKMLAEENENES 202
           FKL  SAELK ILARMD R+H LY SLPTNAMMI+CTGHGDTA+VRRLRKMLAE  +NES
Sbjct: 481 FKLKASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLAE--QNES 538

Query: 201 NLCREKIVEILEEFQARAEVALCFVGVKH 115
           N+CREKIVEILEE QARAEVALCFVGVKH
Sbjct: 539 NICREKIVEILEEVQARAEVALCFVGVKH 567


>ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1|
           rnase h, putative [Ricinus communis]
          Length = 572

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/90 (64%), Positives = 75/90 (83%)
 Frame = -1

Query: 384 GFKLNKSAELKGILARMDTRVHKLYASLPTNAMMIVCTGHGDTAVVRRLRKMLAEENENE 205
           G + + ++ELK IL RMD RV  LY++LPTN M+I+CTGHGDTA+VRRLRK+L E  + E
Sbjct: 485 GVRCSMTSELKEILIRMDARVRCLYSALPTNTMLIICTGHGDTAIVRRLRKLLTE--KQE 542

Query: 204 SNLCREKIVEILEEFQARAEVALCFVGVKH 115
           + +CREKIV++LEE QA+AEVALCFVGVK+
Sbjct: 543 TRICREKIVKVLEELQAQAEVALCFVGVKN 572


>ref|XP_004168198.1| PREDICTED: small RNA degrading nuclease 5-like, partial [Cucumis
           sativus]
          Length = 199

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/84 (66%), Positives = 71/84 (84%)
 Frame = -1

Query: 366 SAELKGILARMDTRVHKLYASLPTNAMMIVCTGHGDTAVVRRLRKMLAEENENESNLCRE 187
           S EL+ ILARMD+R++ LY SLPTNAM+I+CTGHGD  +V+RLRKML E  ++E+++CRE
Sbjct: 118 SVELQEILARMDSRINDLYTSLPTNAMLIICTGHGDITLVQRLRKMLQE--QSETSICRE 175

Query: 186 KIVEILEEFQARAEVALCFVGVKH 115
           KIV+ILEE  A+AEVALCFV  KH
Sbjct: 176 KIVKILEELHAQAEVALCFVCTKH 199


>ref|XP_004146782.1| PREDICTED: small RNA degrading nuclease 5-like [Cucumis sativus]
          Length = 572

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/84 (66%), Positives = 71/84 (84%)
 Frame = -1

Query: 366 SAELKGILARMDTRVHKLYASLPTNAMMIVCTGHGDTAVVRRLRKMLAEENENESNLCRE 187
           S EL+ ILARMD+R++ LY SLPTNAM+I+CTGHGD  +V+RLRKML E  ++E+++CRE
Sbjct: 491 SVELQEILARMDSRINDLYTSLPTNAMLIICTGHGDITLVQRLRKMLQE--QSETSICRE 548

Query: 186 KIVEILEEFQARAEVALCFVGVKH 115
           KIV+ILEE  A+AEVALCFV  KH
Sbjct: 549 KIVKILEELHAQAEVALCFVCTKH 572


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