BLASTX nr result

ID: Glycyrrhiza23_contig00022030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022030
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323361.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002524103.1| conserved hypothetical protein [Ricinus comm...    65   4e-09
ref|XP_002267701.2| PREDICTED: uncharacterized protein LOC100257...    64   1e-08
ref|XP_002308339.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|NP_001190093.1| uncharacterized protein [Arabidopsis thalian...    64   2e-08

>ref|XP_002323361.1| predicted protein [Populus trichocarpa] gi|222867991|gb|EEF05122.1|
           predicted protein [Populus trichocarpa]
          Length = 630

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 45/103 (43%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
 Frame = +2

Query: 2   RIVSSSSVNW---SVMRGT---MPQLTFQHCPFKNENMRGSQ------GFKVLHSWMYPQ 145
           R+ SS SVNW   S+M  T   MPQL  Q    K+ +  G          K LHSW+YPQ
Sbjct: 245 RVASSCSVNWIHRSIMSSTYNGMPQLASQFGDSKDSSSSGQAMTSQILSSKALHSWVYPQ 304

Query: 146 XXXXXXXXXXXXXXTAEGESEFLRKRQVAWEESFRDLYYLLRK 274
                           EG+  FLRKRQ+AWE+SFR LYY+LRK
Sbjct: 305 STLPSAVISVLTSSAIEGD--FLRKRQLAWEDSFRSLYYMLRK 345


>ref|XP_002524103.1| conserved hypothetical protein [Ricinus communis]
           gi|223536671|gb|EEF38313.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 644

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
 Frame = +2

Query: 2   RIVSSSSVNW---SVMRGT---MPQLTFQHCPFKNENMRGSQ------GFKVLHSWMYPQ 145
           R+ SS SVNW   S++      +PQLT Q    ++ +  G          K LHSW+YPQ
Sbjct: 249 RVASSCSVNWIHRSILGSAYNAIPQLTSQFGCSEDSSGSGQALTSQILSSKALHSWVYPQ 308

Query: 146 XXXXXXXXXXXXXXTAEG-------ESEFLRKRQVAWEESFRDLYYLLRK 274
                          AEG       E +FLRKRQ+ WE+SFR LYY+LRK
Sbjct: 309 CILPPSVISVLSSQAAEGVFAFPSVEIDFLRKRQLGWEDSFRSLYYMLRK 358


>ref|XP_002267701.2| PREDICTED: uncharacterized protein LOC100257121 [Vitis vinifera]
          Length = 770

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 16/107 (14%)
 Frame = +2

Query: 2   RIVSSSSVNW-------SVMRGTMPQLTFQHCPFKNENMRGSQG---------FKVLHSW 133
           +IVSSSSVNW       +   GT    T Q    K++N+  S G         ++ LHSW
Sbjct: 381 QIVSSSSVNWFHRLNMSATYNGTT-LFTPQFGCSKDQNISCSSGLTSTAQIFNYRALHSW 439

Query: 134 MYPQXXXXXXXXXXXXXXTAEGESEFLRKRQVAWEESFRDLYYLLRK 274
           ++PQ               AEG ++FL KRQ+AWE+SFR LYY+LRK
Sbjct: 440 VHPQSSLPPSVISALTLSAAEG-ADFLIKRQLAWEDSFRSLYYMLRK 485


>ref|XP_002308339.1| predicted protein [Populus trichocarpa] gi|222854315|gb|EEE91862.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/103 (40%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
 Frame = +2

Query: 2   RIVSSSSVNW---SVMRGT---MPQLTFQHCPFKNENMRGSQ------GFKVLHSWMYPQ 145
           R+ SS SVN    S+M  T   MPQL  Q    ++    G          K LHSW+YPQ
Sbjct: 213 RVASSCSVNRIHRSIMSSTYNGMPQLASQFGDSQDNRSSGQALASQILSSKALHSWVYPQ 272

Query: 146 XXXXXXXXXXXXXXTAEGESEFLRKRQVAWEESFRDLYYLLRK 274
                           EG+  F+RKRQ+AWE+SFR LYY+LRK
Sbjct: 273 STLPAAVISVLTLSATEGD--FIRKRQLAWEDSFRSLYYMLRK 313


>ref|NP_001190093.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332645758|gb|AEE79279.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 590

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
 Frame = +2

Query: 2   RIVSSSSVNW---SVMRGT---MPQLTFQHCPFKNENMRGSQGFKV---------LHSWM 136
           R+VSSS ++W   S+M  T   MPQL    C   N++     G  V         LHSW+
Sbjct: 218 RLVSSSPLSWLHRSIMGSTYNGMPQLKSLSCNVVNQDNSSGSGASVVSQVLNSMSLHSWV 277

Query: 137 YPQXXXXXXXXXXXXXXTAE-GESEFLRKRQVAWEESFRDLYYLLRK 274
           YPQ               ++ GE +FL+KR++AWE++FR LY++ RK
Sbjct: 278 YPQSTLPPFVISAMVASVSDRGEVDFLQKRKLAWEDAFRSLYFMFRK 324


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