BLASTX nr result
ID: Glycyrrhiza23_contig00022017
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00022017 (602 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003543415.1| PREDICTED: E3 ubiquitin-protein ligase PUB23... 254 1e-65 ref|XP_003540288.1| PREDICTED: E3 ubiquitin-protein ligase PUB23... 254 1e-65 gb|ACU20925.1| unknown [Glycine max] 254 1e-65 ref|XP_003539150.1| PREDICTED: E3 ubiquitin-protein ligase PUB24... 238 6e-61 ref|XP_002314258.1| predicted protein [Populus trichocarpa] gi|2... 228 8e-58 >ref|XP_003543415.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max] Length = 422 Score = 254 bits (648), Expect = 1e-65 Identities = 125/147 (85%), Positives = 137/147 (93%) Frame = -3 Query: 600 LGRNRMKIVEAGAVTELIELALEKPEKSLTELTFTLLANLCSCADGREQFLKHAAGIAVL 421 LGRNRMKIVEAGAV ELIELALEKPEK++TEL F LLA+LCSCADGREQFL+HAAGIAV+ Sbjct: 276 LGRNRMKIVEAGAVVELIELALEKPEKNMTELIFILLAHLCSCADGREQFLQHAAGIAVV 335 Query: 420 SKRTLRVSPTTDDRALHVLSLISRYSASNEVVHEMLRVGAVSKLCMVMQADCASYLKEKA 241 SKR LRVSPTTDDRALH+ SL+S++SASNEVV EMLRVGAVSKLCMV+QADCASYLKEKA Sbjct: 336 SKRILRVSPTTDDRALHIFSLVSKFSASNEVVQEMLRVGAVSKLCMVLQADCASYLKEKA 395 Query: 240 RGILRLHSSAWNNSPCIEVYLLTRHQR 160 RG+LRLHS WNNSPCI+VYLLTR R Sbjct: 396 RGVLRLHSKTWNNSPCIQVYLLTRFHR 422 >ref|XP_003540288.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max] Length = 427 Score = 254 bits (648), Expect = 1e-65 Identities = 125/147 (85%), Positives = 137/147 (93%) Frame = -3 Query: 600 LGRNRMKIVEAGAVTELIELALEKPEKSLTELTFTLLANLCSCADGREQFLKHAAGIAVL 421 LGRNRMKIVEAGAV ELIELALEKPEK++TEL F LLANLCSCADGREQFL+HAAGIAV+ Sbjct: 281 LGRNRMKIVEAGAVIELIELALEKPEKNMTELVFILLANLCSCADGREQFLQHAAGIAVV 340 Query: 420 SKRTLRVSPTTDDRALHVLSLISRYSASNEVVHEMLRVGAVSKLCMVMQADCASYLKEKA 241 SKR LRVSPTT+DRALH+ SL+S++SASNEVV EMLRVGAVSKLCMV+QADCASYLKEKA Sbjct: 341 SKRILRVSPTTNDRALHIFSLVSKFSASNEVVQEMLRVGAVSKLCMVLQADCASYLKEKA 400 Query: 240 RGILRLHSSAWNNSPCIEVYLLTRHQR 160 RG+LRLHS WNNSPCI+VYLLTR R Sbjct: 401 RGVLRLHSKTWNNSPCIQVYLLTRFHR 427 >gb|ACU20925.1| unknown [Glycine max] Length = 422 Score = 254 bits (648), Expect = 1e-65 Identities = 125/147 (85%), Positives = 137/147 (93%) Frame = -3 Query: 600 LGRNRMKIVEAGAVTELIELALEKPEKSLTELTFTLLANLCSCADGREQFLKHAAGIAVL 421 LGRNRMKIVEAGAV ELIELALEKPEK++TEL F LLA+LCSCADGREQFL+HAAGIAV+ Sbjct: 276 LGRNRMKIVEAGAVVELIELALEKPEKNMTELIFILLAHLCSCADGREQFLQHAAGIAVV 335 Query: 420 SKRTLRVSPTTDDRALHVLSLISRYSASNEVVHEMLRVGAVSKLCMVMQADCASYLKEKA 241 SKR LRVSPTTDDRALH+ SL+S++SASNEVV EMLRVGAVSKLCMV+QADCASYLKEKA Sbjct: 336 SKRILRVSPTTDDRALHIFSLVSKFSASNEVVQEMLRVGAVSKLCMVLQADCASYLKEKA 395 Query: 240 RGILRLHSSAWNNSPCIEVYLLTRHQR 160 RG+LRLHS WNNSPCI+VYLLTR R Sbjct: 396 RGVLRLHSKTWNNSPCIQVYLLTRFHR 422 >ref|XP_003539150.1| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Glycine max] Length = 417 Score = 238 bits (607), Expect = 6e-61 Identities = 118/146 (80%), Positives = 131/146 (89%) Frame = -3 Query: 597 GRNRMKIVEAGAVTELIELALEKPEKSLTELTFTLLANLCSCADGREQFLKHAAGIAVLS 418 GRNR +IVEAGAVTELIEL LEKPEK++TEL F LLA LCSCADGREQFL+HAA IAV+S Sbjct: 272 GRNRTRIVEAGAVTELIELELEKPEKNMTELIFNLLALLCSCADGREQFLRHAAAIAVVS 331 Query: 417 KRTLRVSPTTDDRALHVLSLISRYSASNEVVHEMLRVGAVSKLCMVMQADCASYLKEKAR 238 KR LRVS TDDRA+HV S+I+++SASNEVV EMLRVGAVSKLCM+MQADCASYLKEKAR Sbjct: 332 KRVLRVSAATDDRAIHVFSVIAKFSASNEVVLEMLRVGAVSKLCMLMQADCASYLKEKAR 391 Query: 237 GILRLHSSAWNNSPCIEVYLLTRHQR 160 ILRLHS WNNSPCI++YL TRHQR Sbjct: 392 DILRLHSKVWNNSPCIQLYLFTRHQR 417 >ref|XP_002314258.1| predicted protein [Populus trichocarpa] gi|222850666|gb|EEE88213.1| predicted protein [Populus trichocarpa] Length = 410 Score = 228 bits (580), Expect = 8e-58 Identities = 113/144 (78%), Positives = 125/144 (86%) Frame = -3 Query: 597 GRNRMKIVEAGAVTELIELALEKPEKSLTELTFTLLANLCSCADGREQFLKHAAGIAVLS 418 GRNRMKIVEA AV ELIEL LEKPEK++TEL F +LA LCSCADGREQFLKHA IA++S Sbjct: 265 GRNRMKIVEANAVFELIELELEKPEKNITELIFNILAQLCSCADGREQFLKHAGSIAMIS 324 Query: 417 KRTLRVSPTTDDRALHVLSLISRYSASNEVVHEMLRVGAVSKLCMVMQADCASYLKEKAR 238 KR LRVSP TDDRALH+L IS++SAS+E EMLRVGAVSKLCMV+QADCA YLK+KAR Sbjct: 325 KRVLRVSPATDDRALHILDSISKFSASDEAALEMLRVGAVSKLCMVIQADCAPYLKKKAR 384 Query: 237 GILRLHSSAWNNSPCIEVYLLTRH 166 GILRLHS WNNSPCI VYLLTR+ Sbjct: 385 GILRLHSHMWNNSPCIAVYLLTRY 408