BLASTX nr result

ID: Glycyrrhiza23_contig00022004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022004
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycin...   224   4e-57
ref|XP_003610613.1| DNA polymerase IV [Medicago truncatula] gi|3...   216   2e-54
ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumi...   211   5e-53
emb|CBI22452.3| unnamed protein product [Vitis vinifera]              210   9e-53
ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ...   210   9e-53

>ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycine max]
          Length = 663

 Score =  224 bits (572), Expect = 4e-57
 Identities = 111/122 (90%), Positives = 116/122 (95%)
 Frame = +3

Query: 78  WQSYHTVYTTAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEAFIRQKIDNFRLQYAK 257
           WQSYHTVYTTAKAGME VDKEKVQRVVYEMSKGSKYFQNEERKEAFI+QKIDN R+Q A 
Sbjct: 13  WQSYHTVYTTAKAGMELVDKEKVQRVVYEMSKGSKYFQNEERKEAFIKQKIDNLRIQCAN 72

Query: 258 LTQADLSHYQKVADRRILELEASRDLSRIWLHVDMDAFYAAVETLSNPALKGRPMAVGSM 437
           LTQ DL+HYQKVADRRI+ELEASRDLSRIWLHVDMDAFYAAVETLSNP LKG+PMAVGSM
Sbjct: 73  LTQEDLAHYQKVADRRIVELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGKPMAVGSM 132

Query: 438 SM 443
           SM
Sbjct: 133 SM 134


>ref|XP_003610613.1| DNA polymerase IV [Medicago truncatula] gi|355511948|gb|AES93571.1|
           DNA polymerase IV [Medicago truncatula]
          Length = 706

 Score =  216 bits (550), Expect = 2e-54
 Identities = 108/144 (75%), Positives = 120/144 (83%)
 Frame = +3

Query: 12  MEGSESNGDXXXXXXXXXXXXXWQSYHTVYTTAKAGMEGVDKEKVQRVVYEMSKGSKYFQ 191
           MEGS+ N               WQSY+TVYT+AKAGMEGVDKEKVQR+VYEMSKGSKYFQ
Sbjct: 3   MEGSDDN--------------RWQSYNTVYTSAKAGMEGVDKEKVQRIVYEMSKGSKYFQ 48

Query: 192 NEERKEAFIRQKIDNFRLQYAKLTQADLSHYQKVADRRILELEASRDLSRIWLHVDMDAF 371
           NEERKE+FI+ K+ N RL ++ LT +DLSHYQK+AD+RILELEASRDLSRIWLHVDMDAF
Sbjct: 49  NEERKESFIKYKVQNMRLHFSNLTHSDLSHYQKIADKRILELEASRDLSRIWLHVDMDAF 108

Query: 372 YAAVETLSNPALKGRPMAVGSMSM 443
           YAAVETLSNP LKG PMAVGSMSM
Sbjct: 109 YAAVETLSNPMLKGMPMAVGSMSM 132


>ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumis sativus]
           gi|449495765|ref|XP_004159938.1| PREDICTED: DNA
           polymerase kappa-like [Cucumis sativus]
          Length = 693

 Score =  211 bits (537), Expect = 5e-53
 Identities = 107/144 (74%), Positives = 119/144 (82%)
 Frame = +3

Query: 12  MEGSESNGDXXXXXXXXXXXXXWQSYHTVYTTAKAGMEGVDKEKVQRVVYEMSKGSKYFQ 191
           ME  E+ GD             WQSYHTVYT AKAGMEGVDKE+VQR+VYEMSKGSKYF+
Sbjct: 1   MENKETAGDADRP---------WQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFE 51

Query: 192 NEERKEAFIRQKIDNFRLQYAKLTQADLSHYQKVADRRILELEASRDLSRIWLHVDMDAF 371
           NEERKEA IR+KI+N R + A+LT  DLS YQKVAD+RILELE++RDLSRIWLHVDMDAF
Sbjct: 52  NEERKEATIREKIENMRARCAQLTATDLSQYQKVADKRILELESTRDLSRIWLHVDMDAF 111

Query: 372 YAAVETLSNPALKGRPMAVGSMSM 443
           YAAVETLSNP LKG+PMAVGSMSM
Sbjct: 112 YAAVETLSNPLLKGKPMAVGSMSM 135


>emb|CBI22452.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  210 bits (535), Expect = 9e-53
 Identities = 102/122 (83%), Positives = 112/122 (91%)
 Frame = +3

Query: 78  WQSYHTVYTTAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEAFIRQKIDNFRLQYAK 257
           WQSY TVYT AKAGM+GVDKEKVQR VYEMSKGSKYF+NEERKEAFIRQKIDN R + AK
Sbjct: 18  WQSYTTVYTNAKAGMDGVDKEKVQRTVYEMSKGSKYFENEERKEAFIRQKIDNMRARCAK 77

Query: 258 LTQADLSHYQKVADRRILELEASRDLSRIWLHVDMDAFYAAVETLSNPALKGRPMAVGSM 437
           L+ +D+SHYQ VAD+RILELEA+RDLSRIWLHVDMDAFYAAVETL NP+L+GRPMAVG M
Sbjct: 78  LSASDISHYQMVADKRILELEATRDLSRIWLHVDMDAFYAAVETLDNPSLRGRPMAVGGM 137

Query: 438 SM 443
           SM
Sbjct: 138 SM 139


>ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera]
          Length = 661

 Score =  210 bits (535), Expect = 9e-53
 Identities = 102/122 (83%), Positives = 112/122 (91%)
 Frame = +3

Query: 78  WQSYHTVYTTAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEAFIRQKIDNFRLQYAK 257
           WQSY TVYT AKAGM+GVDKEKVQR VYEMSKGSKYF+NEERKEAFIRQKIDN R + AK
Sbjct: 18  WQSYTTVYTNAKAGMDGVDKEKVQRTVYEMSKGSKYFENEERKEAFIRQKIDNMRARCAK 77

Query: 258 LTQADLSHYQKVADRRILELEASRDLSRIWLHVDMDAFYAAVETLSNPALKGRPMAVGSM 437
           L+ +D+SHYQ VAD+RILELEA+RDLSRIWLHVDMDAFYAAVETL NP+L+GRPMAVG M
Sbjct: 78  LSASDISHYQMVADKRILELEATRDLSRIWLHVDMDAFYAAVETLDNPSLRGRPMAVGGM 137

Query: 438 SM 443
           SM
Sbjct: 138 SM 139


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