BLASTX nr result

ID: Glycyrrhiza23_contig00022000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00022000
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU23069.1| unknown [Glycine max]                                  116   7e-24
ref|XP_003551722.1| PREDICTED: uncharacterized protein LOC100779...   114   5e-23
ref|XP_002324034.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-12
ref|XP_003543695.1| PREDICTED: uncharacterized protein LOC100793...    77   5e-12
ref|XP_002517466.1| conserved hypothetical protein [Ricinus comm...    67   2e-11

>gb|ACU23069.1| unknown [Glycine max]
          Length = 175

 Score =  116 bits (291), Expect = 7e-24
 Identities = 68/125 (54%), Positives = 83/125 (66%), Gaps = 4/125 (3%)
 Frame = -2

Query: 571 SSSHSQMLPLISNSDHDVQMQQHPNKIKVRSVLPFFCFINMTMSCGTTIYRAYNHNDTPM 392
           +SS   +LPL + SDH  Q        K RSVLP F FINMT+S   TIYRA+N+NDTP 
Sbjct: 2   TSSSLHLLPL-TYSDHAPQ--------KPRSVLPIFGFINMTISSVVTIYRAHNNNDTPT 52

Query: 391 IVFITIVYFGSFLLDYWSRLYQKLSPLQASK----RRNLKIGTWVLLSGILLGFAAEFST 224
           +VF+  VYFGSFLLDY  RLY  L    +S     +RN+KI  WVL+S I+LGFA EFST
Sbjct: 53  VVFVGFVYFGSFLLDYCFRLYHSLPKSSSSNSHNIKRNVKIIIWVLISTIMLGFACEFST 112

Query: 223 FIASL 209
           F++ L
Sbjct: 113 FMSFL 117


>ref|XP_003551722.1| PREDICTED: uncharacterized protein LOC100779334 [Glycine max]
          Length = 187

 Score =  114 bits (284), Expect = 5e-23
 Identities = 63/128 (49%), Positives = 81/128 (63%), Gaps = 1/128 (0%)
 Frame = -2

Query: 565 SHSQMLPLISNSDHDVQMQQHPNKIKVRSVLPFFCFINMTMSCGTTIYRAYNHNDTPMIV 386
           S S  LPL S + +D       N  K  SVLP+F  INM ++ GTTIYRAYN+ D  MI 
Sbjct: 7   SKSFPLPLESTNLND-------NHKKFFSVLPYFGVINMIITSGTTIYRAYNNGDIQMIA 59

Query: 385 FITIVYFGSFLLDYWSRLYQKLSPL-QASKRRNLKIGTWVLLSGILLGFAAEFSTFIASL 209
           F+T ++FG+FLLDYW RLY K+ P  Q+ ++  LKI  WVL+S I+ GFA EFSTF+   
Sbjct: 60  FVTFMFFGTFLLDYWIRLYNKMPPHDQSYEKLKLKIRIWVLVSSIMFGFACEFSTFMGFY 119

Query: 208 GLFACLGL 185
           G     G+
Sbjct: 120 GSITFFGV 127


>ref|XP_002324034.1| predicted protein [Populus trichocarpa] gi|222867036|gb|EEF04167.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score = 70.5 bits (171), Expect(2) = 3e-12
 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = -2

Query: 460 FINMTMSCGTTIYRAYNHNDTPMIVFITIVYFGSFLLDYWSRLYQKL-SPLQASKRRNLK 284
           +  +T +   TI RAY HND PM+ FI   YF  F++D+   ++ +L S  ++ K+  LK
Sbjct: 34  YFYLTFNSIRTICRAYMHNDIPMVAFIVFAYFSYFIVDHCLTVFNRLPSDEESPKKELLK 93

Query: 283 IGTWVLLSGILLGFAAEFSTFIASLGLFACLGL 185
           +  W L S I+ GFA +FSTF+    +F   G+
Sbjct: 94  VTIWSLTSAIMFGFAYQFSTFMGPTVVFLMYGI 126



 Score = 28.1 bits (61), Expect(2) = 3e-12
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -1

Query: 197 MFGIVIAINALVFYAYFILECDK-CSSVCSTR 105
           M+GI I  +A++FYA+FI +  +   + CS +
Sbjct: 123 MYGIAIVSSAILFYAHFIYDAQRGYKAFCSVK 154


>ref|XP_003543695.1| PREDICTED: uncharacterized protein LOC100793962 [Glycine max]
          Length = 164

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 55/125 (44%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
 Frame = -2

Query: 571 SSSHSQMLPLISNSDHDVQMQQHPNKIKVRSVLPFFCFINMTMSCGTTIYRAYNHNDTPM 392
           +SS   +LPL + SDH  Q        K RSVLP F FIN+ +     +Y    H     
Sbjct: 2   TSSSLHLLPL-TYSDHAPQ--------KPRSVLPIFGFINIYIVSIIKLYENLIH----- 47

Query: 391 IVFITIVYFGSFLLDYWSRLYQKLSPLQASK----RRNLKIGTWVLLSGILLGFAAEFST 224
                 VYFGSFLLDY  RLY  L    +S     +RN+KI  WVL+S I+LGFA EFST
Sbjct: 48  ------VYFGSFLLDYCFRLYHSLPKSSSSNSHNIKRNVKIIIWVLISTIMLGFACEFST 101

Query: 223 FIASL 209
           F++ L
Sbjct: 102 FMSFL 106


>ref|XP_002517466.1| conserved hypothetical protein [Ricinus communis]
           gi|223543477|gb|EEF45008.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score = 67.4 bits (163), Expect(2) = 2e-11
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -2

Query: 451 MTMSCGTTIYRAYNHNDTPMIVFITIVYFGSFLLDYWSRLYQKL--SPLQASKRRNLKIG 278
           +T +  TT YRAY +NDT M+VFI  VY G F+LD+    Y +L  +     K+  LK+ 
Sbjct: 37  LTFNSITTTYRAYINNDTQMVVFIIFVYLGYFVLDFCITTYNQLPRNGEYHCKKEFLKVA 96

Query: 277 TWVLLSGILLGFAAEFSTFIA 215
            W L S +L GF  +FSTF++
Sbjct: 97  IWSLTSAVLFGFGYQFSTFMS 117



 Score = 28.5 bits (62), Expect(2) = 2e-11
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -1

Query: 197 MFGIVIAINALVFYAYFILECDKCSSVCSTRYSCCNDDSDKNVAQHKEGYEPLTGE 30
           M+G+ I  +  +FY YF+   D  +S       CCN +S   V  H      LTG+
Sbjct: 124 MYGVAIICSLFLFYVYFVCYSDGQNSDFRV---CCNVES--IVISHLSSSGRLTGD 174


Top