BLASTX nr result

ID: Glycyrrhiza23_contig00021985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021985
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621291.1| Transmembrane emp24 domain-containing protei...   146   2e-33
gb|AFK33589.1| unknown [Lotus japonicus]                              136   2e-30
ref|XP_003551743.1| PREDICTED: transmembrane emp24 domain-contai...   136   2e-30
gb|ACJ85043.1| unknown [Medicago truncatula] gi|388502356|gb|AFK...   131   6e-29
ref|XP_003618538.1| Transmembrane emp24 domain-containing protei...   131   6e-29

>ref|XP_003621291.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|124360246|gb|ABN08259.1| emp24/gp25L/p24 [Medicago
           truncatula] gi|355496306|gb|AES77509.1| Transmembrane
           emp24 domain-containing protein [Medicago truncatula]
          Length = 212

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/93 (74%), Positives = 79/93 (84%)
 Frame = +2

Query: 59  MLHPILLVLTIIAPALMCSFVNSMRFNLKPGQPKCISEDIKSNAMTVGKYFVVNPNEGYP 238
           ML+ ILL++ I+ PALMC+ VNSMRF+LK G PKCI E+I SNAMTVG Y VVNPNEGYP
Sbjct: 1   MLNSILLLIAIV-PALMCNVVNSMRFDLKSGNPKCIVEEIMSNAMTVGNYSVVNPNEGYP 59

Query: 239 IPDSHKITIRVRSPYGNNRHFGDHVESGNFAFT 337
           IPDSHK+T+R+RSPYGN  HFGD V SGNFAFT
Sbjct: 60  IPDSHKLTVRLRSPYGNKHHFGDRVASGNFAFT 92


>gb|AFK33589.1| unknown [Lotus japonicus]
          Length = 214

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/94 (67%), Positives = 76/94 (80%)
 Frame = +2

Query: 59  MLHPILLVLTIIAPALMCSFVNSMRFNLKPGQPKCISEDIKSNAMTVGKYFVVNPNEGYP 238
           ML+ ILL+   +  AL CS  NS+RF LK G  KCI+EDIKSNAM+VGKY +VNPNEGYP
Sbjct: 1   MLNSILLLAAFLTLALTCSLANSLRFELKSGHSKCITEDIKSNAMSVGKYSIVNPNEGYP 60

Query: 239 IPDSHKITIRVRSPYGNNRHFGDHVESGNFAFTA 340
           IPD+HKIT++V SPYGN+ H GD V+SG+FAFTA
Sbjct: 61  IPDTHKITVKVSSPYGNSYHNGDQVDSGDFAFTA 94


>ref|XP_003551743.1| PREDICTED: transmembrane emp24 domain-containing protein 10-like
           [Glycine max]
          Length = 218

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/93 (68%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
 Frame = +2

Query: 65  HPILLVLTIIAPALMCSFVNSMRFNLKPGQPKCISEDIKSNAMTVGKYFVVNP-NEGYPI 241
           H  +L + ++APALM S VNSM+F LK GQ KCISED+KSN +TVG Y+V+NP N+G+PI
Sbjct: 6   HIHILRVLLLAPALMASIVNSMQFELKSGQSKCISEDLKSNVITVGNYYVLNPNNDGFPI 65

Query: 242 PDSHKITIRVRSPYGNNRHFGDHVESGNFAFTA 340
           PDSHKIT+RVRSPYGN+ H+GD V SGNFAFTA
Sbjct: 66  PDSHKITVRVRSPYGNDFHYGDSVHSGNFAFTA 98


>gb|ACJ85043.1| unknown [Medicago truncatula] gi|388502356|gb|AFK39244.1| unknown
           [Medicago truncatula]
          Length = 212

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/89 (70%), Positives = 74/89 (83%)
 Frame = +2

Query: 74  LLVLTIIAPALMCSFVNSMRFNLKPGQPKCISEDIKSNAMTVGKYFVVNPNEGYPIPDSH 253
           +L+L I+  AL  SFVNSMRF+L+ G  KCISEDIK NAMTVGKY VVNPNEGYP+PDSH
Sbjct: 5   ILLLAILTLALT-SFVNSMRFDLQMGSTKCISEDIKINAMTVGKYSVVNPNEGYPLPDSH 63

Query: 254 KITIRVRSPYGNNRHFGDHVESGNFAFTA 340
           KIT++V SP+ N  H+ +HVESGNFAFTA
Sbjct: 64  KITVKVSSPHSNTNHYAEHVESGNFAFTA 92


>ref|XP_003618538.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355493553|gb|AES74756.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
          Length = 212

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/89 (70%), Positives = 74/89 (83%)
 Frame = +2

Query: 74  LLVLTIIAPALMCSFVNSMRFNLKPGQPKCISEDIKSNAMTVGKYFVVNPNEGYPIPDSH 253
           +L+L I+  AL  SFVNSMRF+L+ G  KCISEDIK NAMTVGKY VVNPNEGYP+PDSH
Sbjct: 5   ILLLAILTLALT-SFVNSMRFDLQMGSTKCISEDIKINAMTVGKYSVVNPNEGYPLPDSH 63

Query: 254 KITIRVRSPYGNNRHFGDHVESGNFAFTA 340
           KIT++V SP+ N  H+ +HVESGNFAFTA
Sbjct: 64  KITVKVSSPHSNTNHYAEHVESGNFAFTA 92


Top