BLASTX nr result

ID: Glycyrrhiza23_contig00021968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021968
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523814.1| PREDICTED: uncharacterized protein LOC100780...   144   1e-32
ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248...   129   5e-28
emb|CBI19167.3| unnamed protein product [Vitis vinifera]              108   1e-21
ref|XP_002302301.1| methyl binding domain protein [Populus trich...   103   2e-20
ref|XP_002306571.1| methyl binding domain protein [Populus trich...   100   3e-19

>ref|XP_003523814.1| PREDICTED: uncharacterized protein LOC100780637 [Glycine max]
          Length = 877

 Score =  144 bits (364), Expect = 1e-32
 Identities = 105/229 (45%), Positives = 131/229 (57%), Gaps = 34/229 (14%)
 Frame = -1

Query: 585 HRR-TNDDSVIPKIDRSVFNESAGSRKQTFSRLRLAPRNKQQNXXXXXXXXXVNIP---- 421
           HRR ++DDSVIPKIDRS FNESAGSRKQT+S+LRL   NK++           +IP    
Sbjct: 44  HRRNSDDDSVIPKIDRSNFNESAGSRKQTYSKLRL---NKRKQNPAVPASSSFHIPLHIS 100

Query: 420 EPVDVENNKIIALLQQLFGVESLRHVDDN-----RLVPVQVEFKEPFPEYAAQAFQNIPI 256
           EP + EN++I+ALLQQLFGVE LR+   N     RLVPVQV+FK+P P +A  AFQN+PI
Sbjct: 101 EPEEEENSRIVALLQQLFGVEPLRNAPRNDAAERRLVPVQVDFKQPPPMFA--AFQNVPI 158

Query: 255 DVV-DVGTXXXXXXXXXRNENL-----------------------GARLEDGVGEVERKA 148
           DVV D            ++EN                          +  +G GEV   A
Sbjct: 159 DVVADSSQRKRKRGRPRKDENSVTVFVEEPKKVTKEENSVTVFVEEPKKVNGNGEV-NAA 217

Query: 147 VVVETVTSGKGLVVDDVGDPFGEELIGRTQGLVTESQLLEFLEGLRGEW 1
           V   T T  + + +D+  DPF  EL  RTQGL TE Q++EFLE L GEW
Sbjct: 218 VATTTTTVNETVGLDE--DPFEVELKRRTQGLETEPQVVEFLETLNGEW 264


>ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248904 [Vitis vinifera]
          Length = 947

 Score =  129 bits (324), Expect = 5e-28
 Identities = 88/204 (43%), Positives = 108/204 (52%), Gaps = 11/204 (5%)
 Frame = -1

Query: 579 RTNDDSVIPKIDRSVFNESAGSRKQTFSRLRLAPRNKQ------QNXXXXXXXXXVNIPE 418
           R  DD VIPKIDRS+FNESAGSRKQT+SRLRLAPR         +              E
Sbjct: 44  RRCDDVVIPKIDRSIFNESAGSRKQTYSRLRLAPRKPDIAATIPRRPRFSPHLNQKAALE 103

Query: 417 PVDVENNKIIALLQQLFGVESLRHVDDNRLVPVQVEFKEPFPEYAAQAFQNIPIDVVDVG 238
           PVD EN  II LL+ LF  E+  H DD  L+PVQVE++E     + +  QNIPIDVV   
Sbjct: 104 PVDEENTLIIGLLKGLFATET--HADD--LIPVQVEYRES----SNEILQNIPIDVVADS 155

Query: 237 TXXXXXXXXXRNENLGARLEDGVGEVERKAVVVETVTSGKGLVVD-----DVGDPFGEEL 73
                       + +      G GE     ++     +  G+VVD     +  DPFG EL
Sbjct: 156 GRKRKRGRPKSEKTIAVYQNGGSGEGGGMGII-----NNNGVVVDVAALANAEDPFGPEL 210

Query: 72  IGRTQGLVTESQLLEFLEGLRGEW 1
             RT+GL TE +LL FL GL G+W
Sbjct: 211 RRRTEGLTTEEELLGFLTGLSGQW 234


>emb|CBI19167.3| unnamed protein product [Vitis vinifera]
          Length = 1129

 Score =  108 bits (270), Expect = 1e-21
 Identities = 78/199 (39%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
 Frame = -1

Query: 579 RTNDDSVIPKIDRSVFNESAGSRKQTFSRLRLAPRNKQ------QNXXXXXXXXXVNIPE 418
           R  DD VIPKIDRS+FNESAGSRKQT+SRLRLAPR         +              E
Sbjct: 46  RRCDDVVIPKIDRSIFNESAGSRKQTYSRLRLAPRKPDIAATIPRRPRFSPHLNQKAALE 105

Query: 417 PVDVENNKIIALLQQLFGVESLRHVDDNRLVPVQVEFKEPFPEYAAQAFQNIPIDVVDVG 238
           PVD EN  II LL+ LF  E+  H DD  L+PVQVE++E                     
Sbjct: 106 PVDEENTLIIGLLKGLFATET--HADD--LIPVQVEYRE--------------------- 140

Query: 237 TXXXXXXXXXRNENLGARLEDGVGEVERKAVVVETVTSGKGLVVDDVGDPFGEELIGRTQ 58
                           +    G+G +    VVV+         + +  DPFG EL  RT+
Sbjct: 141 ----------------SGEGGGMGIINNNGVVVDVA------ALANAEDPFGPELRRRTE 178

Query: 57  GLVTESQLLEFLEGLRGEW 1
           GL TE +LL FL GL G+W
Sbjct: 179 GLTTEEELLGFLTGLSGQW 197


>ref|XP_002302301.1| methyl binding domain protein [Populus trichocarpa]
           gi|222844027|gb|EEE81574.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 1276

 Score =  103 bits (258), Expect = 2e-20
 Identities = 86/248 (34%), Positives = 113/248 (45%), Gaps = 50/248 (20%)
 Frame = -1

Query: 594 TPQHRRTNDDSV-IPKIDRSVFNESAGSRKQTFSRLRLAPRNKQ---QNXXXXXXXXXVN 427
           +P   RT+   V  PKIDRSVFNESAGSRKQTFSRLRLAPRN      +           
Sbjct: 44  SPHRLRTDTADVSTPKIDRSVFNESAGSRKQTFSRLRLAPRNNNASPSSNSTPVVPFQNT 103

Query: 426 IPEPVDVENNKIIALLQQLFGVESLRHVDDN----RLVPVQVEFKE--PFPEYAAQAFQN 265
             +P+D EN++II+LL+ LFG +S    + N    +LV + V + +    P       QN
Sbjct: 104 ERQPLDEENSQIISLLKSLFGSDSNSIENKNEHYHKLVSIPVIYNDYMRLPSTNNAESQN 163

Query: 264 IPIDVVD---------------------VGTXXXXXXXXXRNENLGARLEDGVGEVERKA 148
           + ID+ D                       +         +NEN+     D    VE K 
Sbjct: 164 VSIDIWDSSQGGLKRLEVNHSISIRTAESSSKKRKRGRPRKNENVNFDNNDNSELVENKT 223

Query: 147 VVV-------------ETVTSGKGLVVDDVG------DPFGEELIGRTQGLVTESQLLEF 25
           + V             E V   K  VV D G      DP+GEEL  RT+G+  +++ L F
Sbjct: 224 IAVVCDNVEVESKKKEEMVMVNKNGVVVDFGALGNMEDPYGEELRRRTEGMQLKAEFLGF 283

Query: 24  LEGLRGEW 1
           LEG  GEW
Sbjct: 284 LEGFEGEW 291


>ref|XP_002306571.1| methyl binding domain protein [Populus trichocarpa]
           gi|222856020|gb|EEE93567.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 1248

 Score =  100 bits (249), Expect = 3e-19
 Identities = 86/243 (35%), Positives = 115/243 (47%), Gaps = 48/243 (19%)
 Frame = -1

Query: 585 HRRTND--DSVIPKIDRSVFNESAGSRKQTFSRLRLAPRNKQ-QNXXXXXXXXXVNIPE- 418
           HR   D  D   PKIDRSVFNESAGSRKQTFSRLRLAPRN    +           I E 
Sbjct: 48  HRLQTDTADVSTPKIDRSVFNESAGSRKQTFSRLRLAPRNNNASSSSNSTPVVPYQITER 107

Query: 417 -PVDVENNKIIALLQQLFGVES----LRHVDDNRLVPVQVEFKE--PFPEYAAQAFQNIP 259
            P+D EN++II LL+ LFG +S      + +++ LV V V + E    P       QN+ 
Sbjct: 108 HPLDEENSQIIYLLKSLFGSDSHFIENNNENNHNLVSVPVIYNEYMRLPCTNNAELQNVG 167

Query: 258 ID----------------VVDVGTXXXXXXXXXRNENL--GARLEDGVGEVERKAVVV-- 139
                             + +  +         +NEN+  G    +  G++E K +VV  
Sbjct: 168 FSQGGVKSLEVNHLISTRIAESSSKKRKRGRPRKNENVDFGYNELEERGKIENKTIVVVC 227

Query: 138 ------------ETVTSGKGLVVDDVG-----DPFGEELIGRTQGLVTESQLLEFLEGLR 10
                         + S  G+VVD V      DP+GEEL  RT+G+  +++ L FLEG  
Sbjct: 228 DDVEVQNKKKEEMEMVSKNGVVVDFVALGNMEDPYGEELRRRTEGMQLKAEFLGFLEGFE 287

Query: 9   GEW 1
           GEW
Sbjct: 288 GEW 290


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