BLASTX nr result

ID: Glycyrrhiza23_contig00021962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021962
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago trunc...   181   6e-44
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   176   2e-42
gb|ACU17851.1| unknown [Glycine max]                                  176   2e-42
ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   175   6e-42
ref|XP_002527667.1| ring finger protein, putative [Ricinus commu...   169   2e-40

>ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago truncatula]
           gi|355514209|gb|AES95832.1| RING-H2 finger protein ATL3A
           [Medicago truncatula]
          Length = 481

 Score =  181 bits (460), Expect = 6e-44
 Identities = 91/135 (67%), Positives = 97/135 (71%)
 Frame = +2

Query: 182 MASLGNPKAWVPYMNNKDCSQGFCSFYCPQWCYVLYPPPPPISSTFEFPDDDDSSTPNFS 361
           MASLGNPKAWVPYMN+KDCSQGFCS YCPQWCY +YPPP P  S FEFPD+D  S+PNFS
Sbjct: 1   MASLGNPKAWVPYMNSKDCSQGFCSVYCPQWCYAIYPPPSP--SPFEFPDED--SSPNFS 56

Query: 362 PLVIAIIGIFASAFLLVSYYAIISKYCGRGXXXXXXXXXXXXXXXXXXXXXXPSLLHEPW 541
           PLVIAIIGI ASAFLLV+YY IISKYCGR                          +HEPW
Sbjct: 57  PLVIAIIGILASAFLLVTYYTIISKYCGRRESSASESREANDEFEDDHHHHHNPSIHEPW 116

Query: 542 HDVSTNGLDEALIKS 586
           H VSTNGLDE LIKS
Sbjct: 117 H-VSTNGLDETLIKS 130


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score =  176 bits (447), Expect = 2e-42
 Identities = 91/135 (67%), Positives = 96/135 (71%)
 Frame = +2

Query: 182 MASLGNPKAWVPYMNNKDCSQGFCSFYCPQWCYVLYPPPPPISSTFEFPDDDDSSTPNFS 361
           MASLGNPK+WVPYMNNKDCSQGFCS YCPQWCYV+YPPPPP    FEFPDDD  S+PNFS
Sbjct: 1   MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPP----FEFPDDD--SSPNFS 54

Query: 362 PLVIAIIGIFASAFLLVSYYAIISKYCGRGXXXXXXXXXXXXXXXXXXXXXXPSLLHEPW 541
           PLVIA+IG+  SAFLLVSYY IISKYCG                        PS LHEPW
Sbjct: 55  PLVIAVIGVLVSAFLLVSYYTIISKYCG---SRESSQSENHEENVELEEDHNPS-LHEPW 110

Query: 542 HDVSTNGLDEALIKS 586
           H   T GLDEALIKS
Sbjct: 111 H-APTIGLDEALIKS 124


>gb|ACU17851.1| unknown [Glycine max]
          Length = 364

 Score =  176 bits (447), Expect = 2e-42
 Identities = 91/135 (67%), Positives = 96/135 (71%)
 Frame = +2

Query: 182 MASLGNPKAWVPYMNNKDCSQGFCSFYCPQWCYVLYPPPPPISSTFEFPDDDDSSTPNFS 361
           MASLGNPK+WVPYMNNKDCSQGFCS YCPQWCYV+YPPPPP    FEFPDDD  S+PNFS
Sbjct: 1   MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPP----FEFPDDD--SSPNFS 54

Query: 362 PLVIAIIGIFASAFLLVSYYAIISKYCGRGXXXXXXXXXXXXXXXXXXXXXXPSLLHEPW 541
           PLVIA+IG+  SAFLLVSYY IISKYCG                        PS LHEPW
Sbjct: 55  PLVIAVIGVLVSAFLLVSYYTIISKYCG---SRESSQSENHEENVELEEDHNPS-LHEPW 110

Query: 542 HDVSTNGLDEALIKS 586
           H   T GLDEALIKS
Sbjct: 111 H-APTIGLDEALIKS 124


>ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 370

 Score =  175 bits (443), Expect = 6e-42
 Identities = 91/135 (67%), Positives = 95/135 (70%)
 Frame = +2

Query: 182 MASLGNPKAWVPYMNNKDCSQGFCSFYCPQWCYVLYPPPPPISSTFEFPDDDDSSTPNFS 361
           MASLGNPK WVPYMNNKDCSQGFCS YCPQWCYV+YPPPPP    FEFP DD  S+PNFS
Sbjct: 1   MASLGNPKTWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPP--PPFEFPSDD--SSPNFS 56

Query: 362 PLVIAIIGIFASAFLLVSYYAIISKYCGRGXXXXXXXXXXXXXXXXXXXXXXPSLLHEPW 541
           PLVIA+IG+ ASAFLLVSYY IISKYCG                        PS  HEPW
Sbjct: 57  PLVIAVIGVLASAFLLVSYYTIISKYCGN--RESSQSEEHEENVELEEDDHNPS-HHEPW 113

Query: 542 HDVSTNGLDEALIKS 586
           H  ST GLDEALIKS
Sbjct: 114 H-ASTIGLDEALIKS 127


>ref|XP_002527667.1| ring finger protein, putative [Ricinus communis]
           gi|223532972|gb|EEF34738.1| ring finger protein,
           putative [Ricinus communis]
          Length = 383

 Score =  169 bits (429), Expect = 2e-40
 Identities = 84/135 (62%), Positives = 92/135 (68%)
 Frame = +2

Query: 182 MASLGNPKAWVPYMNNKDCSQGFCSFYCPQWCYVLYPPPPPISSTFEFPDDDDSSTPNFS 361
           MASLG PK W+PY+N KDCS+GFCS YCPQWCY+++PPPPP     EFP  DD+S P FS
Sbjct: 1   MASLGTPKTWIPYVNGKDCSKGFCSLYCPQWCYIIFPPPPPPPPYDEFP--DDNSGPTFS 58

Query: 362 PLVIAIIGIFASAFLLVSYYAIISKYCGRGXXXXXXXXXXXXXXXXXXXXXXPSLLHEPW 541
           PLVIAIIGI  SAFLLVSYY IISKYCG                        PS LHEPW
Sbjct: 59  PLVIAIIGILVSAFLLVSYYTIISKYCGNNNNDSARRRENQDQIEELEDNHNPS-LHEPW 117

Query: 542 HDVSTNGLDEALIKS 586
           H V+T GLDEALIKS
Sbjct: 118 H-VTTTGLDEALIKS 131


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