BLASTX nr result

ID: Glycyrrhiza23_contig00021949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021949
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2...   174   7e-42
ref|XP_003628786.1| ABC transporter B family member [Medicago tr...   172   2e-41
ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2...   170   1e-40
ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2...   167   1e-39
ref|XP_003612850.1| ABC transporter B family member [Medicago tr...   166   2e-39

>ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1247

 Score =  174 bits (441), Expect = 7e-42
 Identities = 99/144 (68%), Positives = 108/144 (75%), Gaps = 15/144 (10%)
 Frame = -1

Query: 387  LISSPNS-VYASLVQIQE----------DPCLGRSSSIQHSREIS-HPTSIGGSFRSDKE 244
            LIS+PN+ VYASLVQIQE          DP LG SS  +H  E S   TS  GSFRSDKE
Sbjct: 585  LISNPNNNVYASLVQIQEKAFSQSHISGDPYLGGSS--RHLGESSSRATSFRGSFRSDKE 642

Query: 243  SIGRSFTDE---SVGKSSRNASARRLYSMIGPDWFYGVFGTFGAFITGSLMPLFALGISH 73
            S  ++F DE   SVG SSR+ SARRLYSMIGPDWFYGVFGT GAFI G+ MPLFALGISH
Sbjct: 643  STSKAFGDEAEGSVGSSSRHVSARRLYSMIGPDWFYGVFGTLGAFIAGAQMPLFALGISH 702

Query: 72   ALVSYYMDWDTTRHEVKKISFLFC 1
            ALVSYYMDW TTRHEVKK++ LFC
Sbjct: 703  ALVSYYMDWHTTRHEVKKVALLFC 726


>ref|XP_003628786.1| ABC transporter B family member [Medicago truncatula]
           gi|355522808|gb|AET03262.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 884

 Score =  172 bits (437), Expect = 2e-41
 Identities = 92/133 (69%), Positives = 106/133 (79%), Gaps = 4/133 (3%)
 Frame = -1

Query: 387 LISSPNSVYASLVQIQE--DPCLGRSSSIQHSREISHPTSIGGSFRSDKESIGRSFTDE- 217
           LIS+PNS+Y+SLVQ Q   DP LG+SSS+++S EISH  +IGGSF SD+ SIG +  DE 
Sbjct: 119 LISNPNSLYSSLVQGQPSPDPSLGQSSSLKNSAEISHAATIGGSFHSDRSSIGHALADEP 178

Query: 216 -SVGKSSRNASARRLYSMIGPDWFYGVFGTFGAFITGSLMPLFALGISHALVSYYMDWDT 40
            SV K  R+ S  RLYSMIGP W YGVFGT  AF TG+LMPLFALGISHALVSYYMDWD+
Sbjct: 179 RSVVKP-RHVSLIRLYSMIGPYWSYGVFGTLAAFTTGALMPLFALGISHALVSYYMDWDS 237

Query: 39  TRHEVKKISFLFC 1
           T HEVKKI+FLFC
Sbjct: 238 TCHEVKKIAFLFC 250


>ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1246

 Score =  170 bits (430), Expect = 1e-40
 Identities = 92/142 (64%), Positives = 107/142 (75%), Gaps = 13/142 (9%)
 Frame = -1

Query: 387  LISSPNSVYASLVQIQE----------DPCLGRSSSIQHSREISHPT-SIGGSFRSDKES 241
            L+++P SVYASLVQ+QE           P +GR  SI +SRE+S  T S+GGSFRSDKES
Sbjct: 589  LMANPTSVYASLVQLQEAASLHRLPSIGPSMGRQPSITYSRELSRTTTSLGGSFRSDKES 648

Query: 240  IGRSFTDES--VGKSSRNASARRLYSMIGPDWFYGVFGTFGAFITGSLMPLFALGISHAL 67
            IGR   +E+   GK  R+ SA RLYSM+GPDWFYGV GT  AFI G+ MPLFALGISHAL
Sbjct: 649  IGRVCAEETENAGKK-RHVSAARLYSMVGPDWFYGVAGTLCAFIAGAQMPLFALGISHAL 707

Query: 66   VSYYMDWDTTRHEVKKISFLFC 1
            VSYYMDW+TT HEVKKI+FLFC
Sbjct: 708  VSYYMDWETTCHEVKKIAFLFC 729


>ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1245

 Score =  167 bits (422), Expect = 1e-39
 Identities = 91/142 (64%), Positives = 106/142 (74%), Gaps = 13/142 (9%)
 Frame = -1

Query: 387  LISSPNSVYASLVQIQE----------DPCLGRSSSIQHSREISHPT-SIGGSFRSDKES 241
            L+++P SVYASLVQ+QE           P +G   SI +SRE+S  T S+GGSFRSDKES
Sbjct: 589  LMANPTSVYASLVQLQEAASLHRLPSIGPSMGCQPSITYSRELSRTTTSLGGSFRSDKES 648

Query: 240  IGRSFTDES--VGKSSRNASARRLYSMIGPDWFYGVFGTFGAFITGSLMPLFALGISHAL 67
            IGR   +E+   GK  R+ SA RLYSM+GPDWFYGV GT  AFI G+ MPLFALGISHAL
Sbjct: 649  IGRVCAEETENAGKK-RHVSAARLYSMVGPDWFYGVAGTLCAFIAGAQMPLFALGISHAL 707

Query: 66   VSYYMDWDTTRHEVKKISFLFC 1
            VSYYMDW+TT HEVKKI+FLFC
Sbjct: 708  VSYYMDWETTCHEVKKIAFLFC 729


>ref|XP_003612850.1| ABC transporter B family member [Medicago truncatula]
           gi|355514185|gb|AES95808.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1234

 Score =  166 bits (419), Expect = 2e-39
 Identities = 89/140 (63%), Positives = 105/140 (75%), Gaps = 11/140 (7%)
 Frame = -1

Query: 387 LISSPNSVYASLVQIQE----------DPCLGRSSSIQHSREISHP-TSIGGSFRSDKES 241
           L+S+P SVYASLVQ+Q            P LGR SSI +SRE+S   TSIGGSFRSDK+S
Sbjct: 579 LMSNPTSVYASLVQLQGASSLQRLPSVGPSLGRQSSISYSRELSRTGTSIGGSFRSDKDS 638

Query: 240 IGRSFTDESVGKSSRNASARRLYSMIGPDWFYGVFGTFGAFITGSLMPLFALGISHALVS 61
           IGR   D+     S++ SA+RLYSMIGPDW YG FGT  AF+ G+ MPLFALGISHALVS
Sbjct: 639 IGRVGGDDV--SKSKHVSAKRLYSMIGPDWPYGFFGTLCAFVAGAQMPLFALGISHALVS 696

Query: 60  YYMDWDTTRHEVKKISFLFC 1
           YYMDW+TT+ EV+KI+FLFC
Sbjct: 697 YYMDWETTQREVRKIAFLFC 716


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