BLASTX nr result

ID: Glycyrrhiza23_contig00021913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021913
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636017.1| DNA repair and recombination protein RAD54-l...    84   2e-14
ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot...    74   9e-12

>ref|XP_003636017.1| DNA repair and recombination protein RAD54-like protein [Medicago
            truncatula] gi|355501952|gb|AES83155.1| DNA repair and
            recombination protein RAD54-like protein [Medicago
            truncatula]
          Length = 1004

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 54/100 (54%), Positives = 71/100 (71%), Gaps = 8/100 (8%)
 Frame = -3

Query: 280  QVTFVFTNQVNGKLVPVESTISPXXXXXXXXXXKPRRNVEQKSTPFALHDKL-SLRSAS- 107
            +VTFVFTNQV+GKLVPV+S ISP          KP RNVE+KSTPFALH+KL  LRSAS 
Sbjct: 869  EVTFVFTNQVDGKLVPVDS-ISP--KLQKKELHKPSRNVERKSTPFALHNKLVPLRSASN 925

Query: 106  ------TTSCSFPKESLNSVKITKNISINVALRTEQSLVN 5
                  ++S ++ K++ N  + T+NI+++VAL T+ SLVN
Sbjct: 926  IANVSCSSSIAWTKKAKNCERTTQNIAMSVALNTKHSLVN 965


>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
            max]
          Length = 894

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = -3

Query: 280  QVTFVFTNQVNGKLVPVESTISP--XXXXXXXXXXKPRRNVEQKSTPFALHDKLSLRSAS 107
            +VTFVFTNQVNG+LVPVES +SP            K ++N +QK TPF+LH++L L+SA 
Sbjct: 797  EVTFVFTNQVNGRLVPVESIMSPKLQQKDPKKELLKSKQNGKQKPTPFSLHNRLPLQSA- 855

Query: 106  TTSCSFPKESLNSVKITKNISINVALRTEQSLVN 5
                        SV ITKNIS+NVA + + SLV+
Sbjct: 856  ------------SVGITKNISMNVAFKPQYSLVS 877


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