BLASTX nr result

ID: Glycyrrhiza23_contig00021912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021912
         (1578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520829.1| PREDICTED: double-stranded RNA-binding prote...   471   e-130
ref|XP_003553745.1| PREDICTED: double-stranded RNA-binding prote...   459   e-127
ref|XP_003626369.1| Double-stranded RNA binding protein [Medicag...   438   e-120
ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding prote...   356   1e-95
emb|CBI34243.3| unnamed protein product [Vitis vinifera]              356   1e-95

>ref|XP_003520829.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 539

 Score =  471 bits (1213), Expect = e-130
 Identities = 261/453 (57%), Positives = 303/453 (66%), Gaps = 4/453 (0%)
 Frame = +3

Query: 231  MYKNQLQELAQRSCFNFPAYSCIREGPDHAPRFKATVNFSGETFESPTFCSTLRQXXXXX 410
            MYKN+LQELAQRSCFN PAYSCIREGPDHAPRFKATVNF+GETFESPTFCSTLRQ     
Sbjct: 1    MYKNRLQELAQRSCFNLPAYSCIREGPDHAPRFKATVNFNGETFESPTFCSTLRQAEHAA 60

Query: 411  XXXXXXXXXKQGPSRALAARVLDETGVYKSLLQETAHKAGLNLPIYTTIRSGRGHVPTFS 590
                     K+GPSRALAARVLDETGVYK+LLQETAH+AGLNLP+YTTIRSG GH P FS
Sbjct: 61   AEVALNTLAKRGPSRALAARVLDETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHGPNFS 120

Query: 591  CTVEIAGLNFVGDPARTKKQAQKNAAISAWSALRKXXXXXXXXXXXXXXXXXXKGNEDRE 770
            CTVEIAG++F GDP+RTKKQAQKNAA++AWSALRK                  KGNE++E
Sbjct: 121  CTVEIAGMHFTGDPSRTKKQAQKNAAMAAWSALRKLSEHHLSSSTSSSFSLESKGNEEQE 180

Query: 771  QVTIARVL-XXXXXXXXXXXXXDHRHRFQKXXXXXXXXXLPTPGMYLPECQHCGHSSLFP 947
            QV IARVL              D +  +QK          PT  +Y   CQH G SS  P
Sbjct: 181  QVIIARVLASLHPSGSKNFSKSDIQLGWQKSTTTSLVSTQPTTDLYPMHCQHFGISSFSP 240

Query: 948  DATMYXXXXXXXXXXXXNHIFTLTVPQTIPPVPHMYPLVQPAFQLDHCLYFPARDIASVP 1127
            +  +Y            N +  LT+   IP    +YPL+Q  FQ DHCLYFPAR++ASVP
Sbjct: 241  EVALYQIWQQQQIMQQQNRLLALTIQPIIPSTSQIYPLMQSVFQPDHCLYFPARELASVP 300

Query: 1128 VGPEFSIAMSRPPFYFANQFVPDLR-GTSTVTIREIQEEK-EDPQVCNSSNETRDXXXXX 1301
            VGP+ SI  S P FY +NQ  P+L  G ST+TI+EIQEEK EDP VC+ SNETR      
Sbjct: 301  VGPKLSIPSSSPSFYSSNQIGPELNTGRSTLTIKEIQEEKIEDPPVCSFSNETR----VL 356

Query: 1302 XXXXEDEIQKHGSSKSRSKNVQLGGEQSGTSEWASYQRIGSVYRPINIEPQNPPSIDTSC 1481
                EDE Q+HG S SRS N +LGGE    SE  S+   GSV+RP+N E QNP SID+S 
Sbjct: 357  TPATEDESQRHGGSGSRSINAELGGEHCEKSECDSHWGTGSVHRPVNPELQNPSSIDSS- 415

Query: 1482 PIPRAHSKSSSNRSFRRPAA-TSSMMRTSAHTS 1577
             + RAHS++SSNRSFR PAA +SS++RT   TS
Sbjct: 416  -VLRAHSQASSNRSFRPPAASSSSIVRTMCPTS 447


>ref|XP_003553745.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 538

 Score =  459 bits (1182), Expect = e-127
 Identities = 257/453 (56%), Positives = 299/453 (66%), Gaps = 4/453 (0%)
 Frame = +3

Query: 231  MYKNQLQELAQRSCFNFPAYSCIREGPDHAPRFKATVNFSGETFESPTFCSTLRQXXXXX 410
            MYKN+LQELAQRSCFN PAYSCIREGPDHAPRFKATVNF+GETFESPTFCSTLRQ     
Sbjct: 1    MYKNRLQELAQRSCFNLPAYSCIREGPDHAPRFKATVNFNGETFESPTFCSTLRQAEHAA 60

Query: 411  XXXXXXXXXKQGPSRALAARVLDETGVYKSLLQETAHKAGLNLPIYTTIRSGRGHVPTFS 590
                     K+GPS ALAARVLDETGVYK+LLQETAH+AGLNLP+YTTIRSG GH P FS
Sbjct: 61   AEVALNTIAKRGPSGALAARVLDETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHGPNFS 120

Query: 591  CTVEIAGLNFVGDPARTKKQAQKNAAISAWSALRKXXXXXXXXXXXXXXXXXXKGNEDRE 770
            C+VEIAG++F GDP+RTKKQAQKNAA++AWSALRK                  K NE++E
Sbjct: 121  CSVEIAGMHFTGDPSRTKKQAQKNAAMAAWSALRKLSEHHLSSSTSSSFSRESKANEEQE 180

Query: 771  QVTIARVL-XXXXXXXXXXXXXDHRHRFQKXXXXXXXXXLPTPGMYLPECQHCGHSSLFP 947
            QV IA VL              D +  +QK           T  +Y P   HCG SS  P
Sbjct: 181  QVIIAGVLASLHPSGSKNFSTSDSQLGWQKSTTTSLVSTQSTADLY-PMQWHCGISSFSP 239

Query: 948  DATMYXXXXXXXXXXXXNHIFTLTVPQTIPPVPHMYPLVQPAFQLDHCLYFPARDIASVP 1127
            +  +Y            N +  LT+   IP  P +YPL+Q  FQ DHCLYFPAR++ASVP
Sbjct: 240  EVALYQTWQQQQIMQQQNRLLELTIQPIIPSTPEIYPLMQSVFQPDHCLYFPARELASVP 299

Query: 1128 VGPEFSIAMSRPPFYFANQFVPDLR-GTSTVTIREIQEEK-EDPQVCNSSNETRDXXXXX 1301
            +GP+ SIA S P FY +NQ VP+L  G ST+TIREIQEEK EDP VC  SNETR      
Sbjct: 300  LGPKLSIATSNPSFYSSNQIVPELNTGRSTLTIREIQEEKTEDPPVCTFSNETR----VL 355

Query: 1302 XXXXEDEIQKHGSSKSRSKNVQLGGEQSGTSEWASYQRIGSVYRPINIEPQNPPSIDTSC 1481
                EDEIQKHG S  RS+N +L GE    +E  S+    SV RP+N E QNP SID+S 
Sbjct: 356  TPAPEDEIQKHGGSGGRSRNAELVGEHCEKTECDSHWSTRSVIRPVNTELQNPSSIDSS- 414

Query: 1482 PIPRAHSKSSSNRSFRRP-AATSSMMRTSAHTS 1577
             + RAHS++SSNRSFR P AA+SS++RT   TS
Sbjct: 415  -VLRAHSQASSNRSFRPPAAASSSIVRTMCPTS 446


>ref|XP_003626369.1| Double-stranded RNA binding protein [Medicago truncatula]
            gi|355501384|gb|AES82587.1| Double-stranded RNA binding
            protein [Medicago truncatula]
          Length = 505

 Score =  438 bits (1127), Expect = e-120
 Identities = 246/452 (54%), Positives = 285/452 (63%), Gaps = 3/452 (0%)
 Frame = +3

Query: 231  MYKNQLQELAQRSCFNFPAYSCIREGPDHAPRFKATVNFSGETFESPTFCSTLRQXXXXX 410
            MYKN+LQELAQRSCFN PAYSCIREGPDHAPRFK TVNF+GETFESPTFCSTLRQ     
Sbjct: 1    MYKNRLQELAQRSCFNLPAYSCIREGPDHAPRFKVTVNFNGETFESPTFCSTLRQAEHAA 60

Query: 411  XXXXXXXXXKQGPSRALAARVLDETGVYKSLLQETAHKAGLNLPIYTTIRSGRGHVPTFS 590
                      +GPSR LAARVLDETGVYK+LLQETAH+AGLNLP+Y TIR+G GHVP F 
Sbjct: 61   AEVALNTLATRGPSRTLAARVLDETGVYKNLLQETAHRAGLNLPVYRTIRAGPGHVPNFY 120

Query: 591  CTVEIAGLNFVGDPARTKKQAQKNAAISAWSALRKXXXXXXXXXXXXXXXXXXKGNEDRE 770
            CTVEIAG++F GDPARTKKQAQKNAAI+AWSALRK                  K NE++E
Sbjct: 121  CTVEIAGMHFTGDPARTKKQAQKNAAIAAWSALRKLSANQLSSSTSSSFSSESKSNEEQE 180

Query: 771  QVTIARVL-XXXXXXXXXXXXXDHRHRFQKXXXXXXXXXLPTPGMYLPECQHCGHSSLFP 947
             V IARVL              DH+HR+QK          PTPGMY  + QHCG S+  P
Sbjct: 181  HVIIARVLASLQSSGSKNFPECDHQHRWQKSTTTSLVSTQPTPGMYPMQYQHCGISNFSP 240

Query: 948  DATMYXXXXXXXXXXXXNHIFTLTVPQTIPPVPHMYPLVQPAFQLDHCLYFPARDIASVP 1127
            +  +Y              +  LT+   IPP P +YPL+Q   Q D  LYFP+++++S P
Sbjct: 241  ELALY---QTWQQEQIMQQMMALTIQPIIPPAPQIYPLMQSVIQPDRYLYFPSKELSSFP 297

Query: 1128 VGPEFSIAMSRPPFYFANQFVPDLR-GTSTVTIREIQEEK-EDPQVCNSSNETRDXXXXX 1301
            VGP FSIA  RPPFY++NQ VP L  G STVTIREIQEEK ED QVCN SNETR      
Sbjct: 298  VGPNFSIATPRPPFYYSNQIVPQLNTGRSTVTIREIQEEKAEDSQVCNFSNETR----VQ 353

Query: 1302 XXXXEDEIQKHGSSKSRSKNVQLGGEQSGTSEWASYQRIGSVYRPINIEPQNPPSIDTSC 1481
                E+  Q H  S+S S    L GEQS  SEW S++ +           QNP  I    
Sbjct: 354  SPAPENVRQNHVGSRSSSSRNGLVGEQSLKSEWDSHRSM-----------QNPSRITI-- 400

Query: 1482 PIPRAHSKSSSNRSFRRPAATSSMMRTSAHTS 1577
                AHS++SSNR FR PAA+ S +RT+  TS
Sbjct: 401  ----AHSQASSNRCFRSPAASYSTVRTTGPTS 428


>ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding protein 2 [Vitis vinifera]
          Length = 532

 Score =  356 bits (913), Expect = 1e-95
 Identities = 207/456 (45%), Positives = 258/456 (56%), Gaps = 12/456 (2%)
 Frame = +3

Query: 231  MYKNQLQELAQRSCFNFPAYSCIREGPDHAPRFKATVNFSGETFESPTFCSTLRQXXXXX 410
            MYKNQLQELAQRSCFN P+YSCIREGPDHAPRFKATVNF+GETFESP+FCSTLRQ     
Sbjct: 1    MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGETFESPSFCSTLRQAEHAA 60

Query: 411  XXXXXXXXXKQGPSRALAARVLDETGVYKSLLQETAHKAGLNLPIYTTIRSGRGHVPTFS 590
                      +GPS+ALAARVLDETGVYK+LLQETAH+AGLNLP+YTTIRSG GHVP FS
Sbjct: 61   AEVALNTLANRGPSKALAARVLDETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHVPVFS 120

Query: 591  CTVEIAGLNFVGDPARTKKQAQKNAAISAWSALRKXXXXXXXXXXXXXXXXXXKGNEDRE 770
            CTVEIAG++F G+ A+TKKQAQKNAA++AWSALRK                  + NE++E
Sbjct: 121  CTVEIAGMSFTGEAAKTKKQAQKNAAMTAWSALRK---------------LESECNEEQE 165

Query: 771  QVTIARVLXXXXXXXXXXXXXDHRHRFQKXXXXXXXXXLPTPGMYLPECQHCGHSSLFPD 950
            QV IARVL             D +H  Q+           TP     + Q     S FP+
Sbjct: 166  QVIIARVLASLRPSKSNNKQNDRQHGQQRSGSICRDSTPQTPISCSMQYQSTVDPSFFPE 225

Query: 951  ATMYXXXXXXXXXXXXNHIFTLTVPQTIPPVPHMYPLVQPAFQLDHCLYFPARDIASVPV 1130
              MY            N +  L VP    P PH +P +Q  F+ DHCLYFP      + +
Sbjct: 226  MAMYQMWQQEQLAQLQNRLLALPVPLAPQPSPHFFPFMQSMFRPDHCLYFPTEVQQPITM 285

Query: 1131 GPEFSIAMSRPPFYFANQFVPD-LRGTSTVTIREIQEEKEDPQVCNSSNETRD---XXXX 1298
            GP FSIA S   FY +N  VP+ +RG S VTI+EI+E+ E+    + S  +         
Sbjct: 286  GPRFSIAASGSSFYLSNHLVPEPMRGRSMVTIQEIEEKTEERSEFSPSEVSVSPALGDNN 345

Query: 1299 XXXXXEDEIQKHGSSKSR------SKNVQLGGEQSGTSEWASYQRIGSVYRPINIEPQNP 1460
                 ++ IQ+     +       + +VQL   Q G   W S + + S   PI  + Q P
Sbjct: 346  TEAINQEPIQEDNKQNTEELGGKIATSVQLERNQPGQFGWTSRRSVDSRLGPIEFQLQRP 405

Query: 1461 PSIDTSCPIPRAHSKS--SSNRSFRRPAATSSMMRT 1562
               D+S   PR +     SS RS R P+  ++ + T
Sbjct: 406  HGFDSSQSNPRPYHPPGLSSYRSSRPPSTVAAPVMT 441


>emb|CBI34243.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score =  356 bits (913), Expect = 1e-95
 Identities = 207/456 (45%), Positives = 258/456 (56%), Gaps = 12/456 (2%)
 Frame = +3

Query: 231  MYKNQLQELAQRSCFNFPAYSCIREGPDHAPRFKATVNFSGETFESPTFCSTLRQXXXXX 410
            MYKNQLQELAQRSCFN P+YSCIREGPDHAPRFKATVNF+GETFESP+FCSTLRQ     
Sbjct: 1    MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGETFESPSFCSTLRQAEHAA 60

Query: 411  XXXXXXXXXKQGPSRALAARVLDETGVYKSLLQETAHKAGLNLPIYTTIRSGRGHVPTFS 590
                      +GPS+ALAARVLDETGVYK+LLQETAH+AGLNLP+YTTIRSG GHVP FS
Sbjct: 61   AEVALNTLANRGPSKALAARVLDETGVYKNLLQETAHRAGLNLPVYTTIRSGPGHVPVFS 120

Query: 591  CTVEIAGLNFVGDPARTKKQAQKNAAISAWSALRKXXXXXXXXXXXXXXXXXXKGNEDRE 770
            CTVEIAG++F G+ A+TKKQAQKNAA++AWSALRK                  + NE++E
Sbjct: 121  CTVEIAGMSFTGEAAKTKKQAQKNAAMTAWSALRK----LSQRGSPSSPSVESECNEEQE 176

Query: 771  QVTIARVLXXXXXXXXXXXXXDHRHRFQKXXXXXXXXXLPTPGMYLPECQHCGHSSLFPD 950
            QV IARVL             D +H  Q+           TP     + Q     S FP+
Sbjct: 177  QVIIARVLASLRPSKSNNKQNDRQHGQQRSGSICRDSTPQTPISCSMQYQSTVDPSFFPE 236

Query: 951  ATMYXXXXXXXXXXXXNHIFTLTVPQTIPPVPHMYPLVQPAFQLDHCLYFPARDIASVPV 1130
              MY            N +  L VP    P PH +P +Q  F+ DHCLYFP      + +
Sbjct: 237  MAMYQMWQQEQLAQLQNRLLALPVPLAPQPSPHFFPFMQSMFRPDHCLYFPTEVQQPITM 296

Query: 1131 GPEFSIAMSRPPFYFANQFVPD-LRGTSTVTIREIQEEKEDPQVCNSSNETRD---XXXX 1298
            GP FSIA S   FY +N  VP+ +RG S VTI+EI+E+ E+    + S  +         
Sbjct: 297  GPRFSIAASGSSFYLSNHLVPEPMRGRSMVTIQEIEEKTEERSEFSPSEVSVSPALGDNN 356

Query: 1299 XXXXXEDEIQKHGSSKSR------SKNVQLGGEQSGTSEWASYQRIGSVYRPINIEPQNP 1460
                 ++ IQ+     +       + +VQL   Q G   W S + + S   PI  + Q P
Sbjct: 357  TEAINQEPIQEDNKQNTEELGGKIATSVQLERNQPGQFGWTSRRSVDSRLGPIEFQLQRP 416

Query: 1461 PSIDTSCPIPRAHSKS--SSNRSFRRPAATSSMMRT 1562
               D+S   PR +     SS RS R P+  ++ + T
Sbjct: 417  HGFDSSQSNPRPYHPPGLSSYRSSRPPSTVAAPVMT 452


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