BLASTX nr result

ID: Glycyrrhiza23_contig00021892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021892
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37401.1| unknown [Lotus japonicus]                              243   1e-62
ref|NP_001237665.1| uncharacterized protein LOC100527292 [Glycin...   239   4e-61
ref|XP_002285350.1| PREDICTED: peroxisomal membrane protein PMP2...   234   1e-59
emb|CAN76530.1| hypothetical protein VITISV_012682 [Vitis vinifera]   234   1e-59
ref|XP_004167169.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal ...   229   2e-58

>gb|AFK37401.1| unknown [Lotus japonicus]
          Length = 185

 Score =  243 bits (621), Expect = 1e-62
 Identities = 110/122 (90%), Positives = 119/122 (97%)
 Frame = -2

Query: 613 YSGPFGHFLHKLMDKIFKGKKDNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWNT 434
           YSGPFGHFLHKLMDKIFKGK  NETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPW+ 
Sbjct: 63  YSGPFGHFLHKLMDKIFKGKTGNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWSM 122

Query: 433 VMSKVQKDYPSVQLTAWKFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSVAI 254
           V++KV+KDYPSVQLTAWKFWP+VGWVNYQYMP+QFRVIFHSFVA+CWGIFLNL+AR+VAI
Sbjct: 123 VINKVKKDYPSVQLTAWKFWPVVGWVNYQYMPMQFRVIFHSFVAACWGIFLNLRARTVAI 182

Query: 253 KK 248
           KK
Sbjct: 183 KK 184


>ref|NP_001237665.1| uncharacterized protein LOC100527292 [Glycine max]
           gi|255632021|gb|ACU16363.1| unknown [Glycine max]
          Length = 185

 Score =  239 bits (609), Expect = 4e-61
 Identities = 109/121 (90%), Positives = 117/121 (96%)
 Frame = -2

Query: 613 YSGPFGHFLHKLMDKIFKGKKDNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWNT 434
           YSGPFGHFLHKLMDKIFKG+K N+TVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPW+T
Sbjct: 63  YSGPFGHFLHKLMDKIFKGEKGNDTVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWST 122

Query: 433 VMSKVQKDYPSVQLTAWKFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSVAI 254
           V++KV+KDYPSVQLTAWKFWPIVGWVNYQYMPLQ RV+FHS VA+CW IFLNLKARSVAI
Sbjct: 123 VINKVKKDYPSVQLTAWKFWPIVGWVNYQYMPLQLRVVFHSSVAACWAIFLNLKARSVAI 182

Query: 253 K 251
           K
Sbjct: 183 K 183


>ref|XP_002285350.1| PREDICTED: peroxisomal membrane protein PMP22 [Vitis vinifera]
           gi|296083689|emb|CBI23678.3| unnamed protein product
           [Vitis vinifera]
          Length = 185

 Score =  234 bits (596), Expect = 1e-59
 Identities = 106/122 (86%), Positives = 113/122 (92%)
 Frame = -2

Query: 613 YSGPFGHFLHKLMDKIFKGKKDNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWNT 434
           YSGPFGHFLHKLMD IF+GKKDN TVAKKV+LEQ+TSSPWNN  FMMYYGLV+EGR W  
Sbjct: 63  YSGPFGHFLHKLMDIIFRGKKDNTTVAKKVVLEQLTSSPWNNMFFMMYYGLVVEGRGWGL 122

Query: 433 VMSKVQKDYPSVQLTAWKFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSVAI 254
           V +KV+KDYPSVQLTAWKFWPIVGWVNYQYMPLQFRV+FHSFVASCW IFLNLKARSVAI
Sbjct: 123 VRNKVRKDYPSVQLTAWKFWPIVGWVNYQYMPLQFRVVFHSFVASCWAIFLNLKARSVAI 182

Query: 253 KK 248
           KK
Sbjct: 183 KK 184


>emb|CAN76530.1| hypothetical protein VITISV_012682 [Vitis vinifera]
          Length = 185

 Score =  234 bits (596), Expect = 1e-59
 Identities = 106/122 (86%), Positives = 113/122 (92%)
 Frame = -2

Query: 613 YSGPFGHFLHKLMDKIFKGKKDNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWNT 434
           YSGPFGHFLHKLMD IF+GKKDN TVAKKV+LEQ+TSSPWNN  FMMYYGLV+EGR W  
Sbjct: 63  YSGPFGHFLHKLMDIIFRGKKDNTTVAKKVVLEQLTSSPWNNMFFMMYYGLVVEGRGWGL 122

Query: 433 VMSKVQKDYPSVQLTAWKFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSVAI 254
           V +KV+KDYPSVQLTAWKFWPIVGWVNYQYMPLQFRV+FHSFVASCW IFLNLKARSVAI
Sbjct: 123 VKNKVRKDYPSVQLTAWKFWPIVGWVNYQYMPLQFRVVFHSFVASCWAIFLNLKARSVAI 182

Query: 253 KK 248
           KK
Sbjct: 183 KK 184


>ref|XP_004167169.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal membrane protein
           PMP22-like [Cucumis sativus]
          Length = 183

 Score =  229 bits (585), Expect = 2e-58
 Identities = 100/118 (84%), Positives = 113/118 (95%)
 Frame = -2

Query: 613 YSGPFGHFLHKLMDKIFKGKKDNETVAKKVILEQITSSPWNNFLFMMYYGLVIEGRPWNT 434
           Y+GPFGHFLHKLMD+IFKGKK N TVAKKV+LEQ+TSSPWN F+FMMYYGLV+EGRPW+ 
Sbjct: 63  YAGPFGHFLHKLMDRIFKGKKGNTTVAKKVLLEQVTSSPWNXFIFMMYYGLVVEGRPWSL 122

Query: 433 VMSKVQKDYPSVQLTAWKFWPIVGWVNYQYMPLQFRVIFHSFVASCWGIFLNLKARSV 260
           V +KV+KDYP++QLTAW+FWPIVGWVNYQYMP+QFRVIFHSFVASCWGIFLNLKARSV
Sbjct: 123 VKAKVRKDYPTIQLTAWRFWPIVGWVNYQYMPIQFRVIFHSFVASCWGIFLNLKARSV 180


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