BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021837
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containi...   204   6e-51
ref|XP_003627685.1| Pentatricopeptide repeat-containing protein ...   198   3e-49
ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
ref|XP_004150024.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
ref|XP_002524479.1| pentatricopeptide repeat-containing protein,...   160   8e-38

>ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score =  204 bits (519), Expect = 6e-51
 Identities = 92/112 (82%), Positives = 100/112 (89%)
 Frame = -3

Query: 338 LMKMYCKSGNFRRAMDIFENLSHPDIVSWNTILSGFERSVDALNFACSMHLNGIVFDPVT 159
           LMKMYCKSGNF +A+ +FENLSHPDIVSWNT+LSGFE SVDALNFA SMH  GI FDPVT
Sbjct: 118 LMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEESVDALNFARSMHYCGIAFDPVT 177

Query: 158 YTTALAFCWDAHGFLFGWQLHPLVLKCGFGCEVFVGNALITMYSRWGALDEA 3
           YT+ALAFCW  HGFLFGWQLH LV+KCG GCEVF+GNAL+TMYSRWG LDEA
Sbjct: 178 YTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEA 229



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
 Frame = -3

Query: 338 LMKMYCKSGNFRRAMDIFENLSHPDIVSWNTILSGFERS-----VDALNFACSMHLNGIV 174
           L+ MY + G    A  +F+ +   D+VSWN ++SG+ +      ++A+    +M  +G++
Sbjct: 216 LVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGML 275

Query: 173 FDPVTYTTALAFCWDAHGFLFGWQLHPLVLKCGFGCEVFVGNALITMYSR 24
            D V+ T A++ C        G Q+H L  K G+G  V V N L++ YS+
Sbjct: 276 IDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSK 325


>ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|358344437|ref|XP_003636296.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|358345563|ref|XP_003636846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502231|gb|AES83434.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502781|gb|AES83984.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355521707|gb|AET02161.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  198 bits (504), Expect = 3e-49
 Identities = 92/117 (78%), Positives = 101/117 (86%), Gaps = 5/117 (4%)
 Frame = -3

Query: 338 LMKMYCKSGNFRRAMDIFENLSHPDIVSWNTILSGFERSVDALNFACSMHLNGIVFDPVT 159
           LMKMYCK+G F  A+ +FE LS PDIVSWNTILSGFE+SVDALNFAC MHLNG+VFDPVT
Sbjct: 125 LMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGFEKSVDALNFACFMHLNGVVFDPVT 184

Query: 158 YTTALAFCWDA-----HGFLFGWQLHPLVLKCGFGCEVFVGNALITMYSRWGALDEA 3
           YTTAL+FCWD      HGFLFG QLH LV+KCGFGCEVF+GNAL+TMYSRWG LDEA
Sbjct: 185 YTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEA 241



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
 Frame = -3

Query: 338 LMKMYCKSGNFRRAMDIFENLSHPDIVSWNTILSGFERS-----VDALNFACSMHLNGIV 174
           L+ MY + G    A  +F  ++  D+VSWN +LSG+ +      ++A+    +M   G++
Sbjct: 228 LVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGML 287

Query: 173 FDPVTYTTALAFCWDAHGFLFGWQLHPLVLKCGFGCEVFVGNALITMYSRWGALDEA 3
            D V+ T A++ C       FG Q+H L  K G+G  V V N LI+ YS+   L +A
Sbjct: 288 LDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDA 344


>ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/112 (68%), Positives = 88/112 (78%)
 Frame = -3

Query: 338 LMKMYCKSGNFRRAMDIFENLSHPDIVSWNTILSGFERSVDALNFACSMHLNGIVFDPVT 159
           LM MYCKSG   RA  +F+NL  PDIVSWNTILSGFE+S +AL+FA  M+LNG+ FD VT
Sbjct: 114 LMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKSENALSFALRMNLNGVKFDSVT 173

Query: 158 YTTALAFCWDAHGFLFGWQLHPLVLKCGFGCEVFVGNALITMYSRWGALDEA 3
           YTTAL+FC D   FLFGWQLH L LKCGF  +VFVGNAL+TMYSRW  L +A
Sbjct: 174 YTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDA 225



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
 Frame = -3

Query: 338 LMKMYCKSGNFRRAMDIFENLSHPDIVSWNTILSGFERSVD----ALNFACSMHLNGIVF 171
           L+ MY +  +   A  +F+ +   D VSW+ +++G+ +  D    A+     M   G+ F
Sbjct: 212 LVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKF 271

Query: 170 DPVTYTTALAFCWDAHGFLFGWQLHPLVLKCGFGCEVFVGNALITMYSRWGALDEA 3
           D V  T AL+ C        G Q+H L +K G      VGN LI+ YS+   +++A
Sbjct: 272 DNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDA 327


>ref|XP_004150024.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 647

 Score =  161 bits (407), Expect = 6e-38
 Identities = 76/112 (67%), Positives = 87/112 (77%)
 Frame = -3

Query: 338 LMKMYCKSGNFRRAMDIFENLSHPDIVSWNTILSGFERSVDALNFACSMHLNGIVFDPVT 159
           LM MYCKSG   RA  +F+NL  PDIVSWNTILSGFE+S +AL+FA  M+LNG+ FD VT
Sbjct: 114 LMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKSENALSFALRMNLNGVKFDSVT 173

Query: 158 YTTALAFCWDAHGFLFGWQLHPLVLKCGFGCEVFVGNALITMYSRWGALDEA 3
           YTTAL+FC D   FLFGWQLH L LKCGF  +VFVGNAL+TMY RW  L +A
Sbjct: 174 YTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYWRWEHLVDA 225



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
 Frame = -3

Query: 338 LMKMYCKSGNFRRAMDIFENLSHPDIVSWNTILSGFERSVD----ALNFACSMHLNGIVF 171
           L+ MY +  +   A  +F+ +   D VSW+ +++G+ +  D    A+     M   G+ F
Sbjct: 212 LVTMYWRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKF 271

Query: 170 DPVTYTTALAFCWDAHGFLFGWQLHPLVLKCGFGCEVFVGNALITMYSRWGALDEA 3
           D V  T AL+ C        G Q+H + +K G      VGN LI+ YS+   +++A
Sbjct: 272 DNVPITGALSVCGHERNLELGKQIHCVAVKTGHETHTSVGNVLISTYSKCEIIEDA 327


>ref|XP_002524479.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536267|gb|EEF37919.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 576

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/112 (69%), Positives = 86/112 (76%)
 Frame = -3

Query: 338 LMKMYCKSGNFRRAMDIFENLSHPDIVSWNTILSGFERSVDALNFACSMHLNGIVFDPVT 159
           LM MYCKSG F  A+ IFE L+ PDIVSWNT+LSGF+RS +ALNFA  M+ NG+VFD VT
Sbjct: 119 LMNMYCKSGQFTHALCIFETLNDPDIVSWNTVLSGFQRSEEALNFALKMNSNGVVFDAVT 178

Query: 158 YTTALAFCWDAHGFLFGWQLHPLVLKCGFGCEVFVGNALITMYSRWGALDEA 3
           YTT LAFC     FLFG QLH  +LK G  CEVFVGNALITMYSRWG L EA
Sbjct: 179 YTTVLAFCSRIEEFLFGLQLHSCILKVGLDCEVFVGNALITMYSRWGCLLEA 230



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
 Frame = -3

Query: 338 LMKMYCKSGNFRRAMDIFENLSHPDIVSWNTILSGFERS----VDALNFACSMHLNGIVF 171
           L+ MY + G    A  +FE +   D+VSWN I+SG+ ++    ++A++    M   GI  
Sbjct: 217 LITMYSRWGCLLEAGRVFEEMQTTDLVSWNAIISGYTQAGIYGLEAISIFIEMVRRGIKL 276

Query: 170 DPVTYTTALAFCWDAHGFLFGWQLHPLVLKCGFGCEVFVGNALITMYSRWGALDEA 3
           D V++T+A++ C        G Q+H L +K G+G  V VGN LI+ YS+   +++A
Sbjct: 277 DHVSFTSAISACGHERNLEVGRQVHGLSIKRGYGKHVSVGNVLISTYSKCEIIEDA 332