BLASTX nr result

ID: Glycyrrhiza23_contig00021828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021828
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531346.1| PREDICTED: tubulin-specific chaperone C-like...   129   2e-28
gb|ACU23700.1| unknown [Glycine max]                                  129   2e-28
ref|XP_003525053.1| PREDICTED: tubulin-specific chaperone C-like...   114   6e-24
ref|XP_002307082.1| tubulin folding cofactor [Populus trichocarp...   104   7e-21
ref|XP_002532835.1| tubulin folding cofactor C, putative [Ricinu...   100   1e-19

>ref|XP_003531346.1| PREDICTED: tubulin-specific chaperone C-like [Glycine max]
          Length = 336

 Score =  129 bits (324), Expect = 2e-28
 Identities = 70/102 (68%), Positives = 80/102 (78%)
 Frame = +3

Query: 21  EAEAAALQKKHLSMVERLSKRHPTRSGNSESTISLESTPSFLSRFSQLKSSIESQLTHSQ 200
           E E A  QKKHL+M+ERLSKR  +RS N +S+ S  ST S LSRF+ LKSSIESQL  SQ
Sbjct: 3   EEEEAEKQKKHLAMLERLSKRTQSRSQNPDSSSSESSTSSILSRFTHLKSSIESQLAQSQ 62

Query: 201 SLSSDPSQLKPHFRKISESISDLEKLVAESSYFLPPYDVRSS 326
           S+SSDPS LK HF +ISESISDLEK VAE+SY LP YDVR+S
Sbjct: 63  SISSDPSNLKLHFNQISESISDLEKFVAENSYSLPSYDVRTS 104


>gb|ACU23700.1| unknown [Glycine max]
          Length = 337

 Score =  129 bits (324), Expect = 2e-28
 Identities = 70/102 (68%), Positives = 80/102 (78%)
 Frame = +3

Query: 21  EAEAAALQKKHLSMVERLSKRHPTRSGNSESTISLESTPSFLSRFSQLKSSIESQLTHSQ 200
           E E A  QKKHL+M+ERLSKR  +RS N +S+ S  ST S LSRF+ LKSSIESQL  SQ
Sbjct: 4   EEEEAEKQKKHLAMLERLSKRTQSRSQNPDSSSSESSTSSILSRFTHLKSSIESQLAQSQ 63

Query: 201 SLSSDPSQLKPHFRKISESISDLEKLVAESSYFLPPYDVRSS 326
           S+SSDPS LK HF +ISESISDLEK VAE+SY LP YDVR+S
Sbjct: 64  SISSDPSNLKLHFNQISESISDLEKFVAENSYSLPSYDVRTS 105


>ref|XP_003525053.1| PREDICTED: tubulin-specific chaperone C-like [Glycine max]
          Length = 329

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/95 (67%), Positives = 73/95 (76%)
 Frame = +3

Query: 42  QKKHLSMVERLSKRHPTRSGNSESTISLESTPSFLSRFSQLKSSIESQLTHSQSLSSDPS 221
           QKKHL+M+ERLSKR   RS N ES+       S LSRFS LK+SIESQL  SQS+SSDPS
Sbjct: 5   QKKHLAMLERLSKRTQIRSQNPESS-------SILSRFSHLKTSIESQLAQSQSISSDPS 57

Query: 222 QLKPHFRKISESISDLEKLVAESSYFLPPYDVRSS 326
            LK H  +IS+SISDLEKLVAE+SY LP YDVR+S
Sbjct: 58  NLKLHINQISQSISDLEKLVAENSYSLPSYDVRTS 92


>ref|XP_002307082.1| tubulin folding cofactor [Populus trichocarpa]
           gi|222856531|gb|EEE94078.1| tubulin folding cofactor
           [Populus trichocarpa]
          Length = 324

 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/98 (56%), Positives = 73/98 (74%)
 Frame = +3

Query: 33  AALQKKHLSMVERLSKRHPTRSGNSESTISLESTPSFLSRFSQLKSSIESQLTHSQSLSS 212
           A LQKKH +M++RLS RH +R   + ++ +++ST SFLS F++ K SIESQL +S + + 
Sbjct: 6   ATLQKKHQAMLDRLSNRHQSRQKTATTSTTIDSTASFLSTFTESKRSIESQLNNSPN-TP 64

Query: 213 DPSQLKPHFRKISESISDLEKLVAESSYFLPPYDVRSS 326
           DP+ LK H   IS SIS LEKLVAESSYFLP Y++RSS
Sbjct: 65  DPTLLKSHLANISSSISSLEKLVAESSYFLPSYELRSS 102


>ref|XP_002532835.1| tubulin folding cofactor C, putative [Ricinus communis]
           gi|223527402|gb|EEF29542.1| tubulin folding cofactor C,
           putative [Ricinus communis]
          Length = 351

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/99 (52%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
 Frame = +3

Query: 33  AALQKKHLSMVERLSKRHPTRSGNSESTISLESTPSFLSRFSQLKSSIESQLTHSQSL-S 209
           +AL KKH +M++RLS RH  R   S +  +  +T SFLS+F+  K SIESQL+HS +L +
Sbjct: 23  SALNKKHQAMLDRLSNRHQNRINKSTTATATAATASFLSKFTDAKQSIESQLSHSSTLAA 82

Query: 210 SDPSQLKPHFRKISESISDLEKLVAESSYFLPPYDVRSS 326
           +DP+ LK H   IS SIS LE+L+AE+SY LP Y++RSS
Sbjct: 83  TDPTLLKSHLVNISASISSLEQLIAENSYLLPSYELRSS 121


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