BLASTX nr result

ID: Glycyrrhiza23_contig00021808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021808
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518776.1| PREDICTED: uncharacterized protein LOC100806...   285   2e-75
ref|XP_003614117.1| Ribosome maturation factor rimP [Medicago tr...   277   7e-73
gb|AFK43509.1| unknown [Medicago truncatula]                          274   5e-72
emb|CBI27304.3| unnamed protein product [Vitis vinifera]              244   7e-63
ref|XP_002273771.1| PREDICTED: uncharacterized protein LOC100259...   244   7e-63

>ref|XP_003518776.1| PREDICTED: uncharacterized protein LOC100806065 [Glycine max]
          Length = 279

 Score =  285 bits (730), Expect = 2e-75
 Identities = 138/158 (87%), Positives = 149/158 (94%)
 Frame = +2

Query: 2   RAHSIAEEVLRQFSEDIKLYAFKTSPRGYVYVRLDKLTNEYGCPSMEELECYNQEFKKRL 181
           RA SIAEEVL QFSEDIKL+AFKT+PRGYVYVRLDKLT+EYGCPSMEELECYNQ++K RL
Sbjct: 105 RALSIAEEVLMQFSEDIKLFAFKTTPRGYVYVRLDKLTHEYGCPSMEELECYNQKYKTRL 164

Query: 182 DEVGALGEIPDDLALEVSSPGAERILKVPDDLSRFKDMPMRVFYTENTESNCSEGDGVFL 361
           DEVGALGEIPDDLALEVSSPGAER+LKVPDD+SRFKD+PMRV YTEN ESNC E DGVFL
Sbjct: 165 DEVGALGEIPDDLALEVSSPGAERLLKVPDDISRFKDLPMRVCYTENIESNCPEKDGVFL 224

Query: 362 LDSIEIDSEICVWKLANVKENRDPQRKGRPLSRKQKDW 475
           LDSIE DSE+CVWKLA+VKENRDP +KGRPLSRKQKDW
Sbjct: 225 LDSIENDSEMCVWKLADVKENRDPLKKGRPLSRKQKDW 262


>ref|XP_003614117.1| Ribosome maturation factor rimP [Medicago truncatula]
           gi|355515452|gb|AES97075.1| Ribosome maturation factor
           rimP [Medicago truncatula]
          Length = 282

 Score =  277 bits (708), Expect = 7e-73
 Identities = 134/158 (84%), Positives = 145/158 (91%)
 Frame = +2

Query: 2   RAHSIAEEVLRQFSEDIKLYAFKTSPRGYVYVRLDKLTNEYGCPSMEELECYNQEFKKRL 181
           RAHSIAEEVL QFSED+KL+AFKTSPRGYVYVRLDKLT +YGCPSMEEL+ YNQEFKKRL
Sbjct: 108 RAHSIAEEVLVQFSEDLKLFAFKTSPRGYVYVRLDKLTTKYGCPSMEELDSYNQEFKKRL 167

Query: 182 DEVGALGEIPDDLALEVSSPGAERILKVPDDLSRFKDMPMRVFYTENTESNCSEGDGVFL 361
           DEVGALGEIPDDL LEVSSPG +RILKVPDDL+RFK+MPMRV Y EN ESNC E DGVFL
Sbjct: 168 DEVGALGEIPDDLGLEVSSPGLDRILKVPDDLNRFKEMPMRVCYAENIESNCREVDGVFL 227

Query: 362 LDSIEIDSEICVWKLANVKENRDPQRKGRPLSRKQKDW 475
           LDSIEIDSE+CVWKLA+VKENRD   KG+PL+RKQKDW
Sbjct: 228 LDSIEIDSEVCVWKLADVKENRDATIKGKPLNRKQKDW 265


>gb|AFK43509.1| unknown [Medicago truncatula]
          Length = 282

 Score =  274 bits (701), Expect = 5e-72
 Identities = 133/158 (84%), Positives = 144/158 (91%)
 Frame = +2

Query: 2   RAHSIAEEVLRQFSEDIKLYAFKTSPRGYVYVRLDKLTNEYGCPSMEELECYNQEFKKRL 181
           RAHSIAEEVL QFSED+KL+AFKTSPRGYVYVRLDKLT +YGCPSMEEL+ YNQEFKKRL
Sbjct: 108 RAHSIAEEVLVQFSEDLKLFAFKTSPRGYVYVRLDKLTTKYGCPSMEELDSYNQEFKKRL 167

Query: 182 DEVGALGEIPDDLALEVSSPGAERILKVPDDLSRFKDMPMRVFYTENTESNCSEGDGVFL 361
           DEVGALGEIPDDL LEVSSPG +RILKVPDDL+RFK+MPMRV Y EN ESNC E  GVFL
Sbjct: 168 DEVGALGEIPDDLGLEVSSPGLDRILKVPDDLNRFKEMPMRVCYAENIESNCREVGGVFL 227

Query: 362 LDSIEIDSEICVWKLANVKENRDPQRKGRPLSRKQKDW 475
           LDSIEIDSE+CVWKLA+VKENRD   KG+PL+RKQKDW
Sbjct: 228 LDSIEIDSEVCVWKLADVKENRDATIKGKPLNRKQKDW 265


>emb|CBI27304.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  244 bits (622), Expect = 7e-63
 Identities = 115/158 (72%), Positives = 137/158 (86%)
 Frame = +2

Query: 2   RAHSIAEEVLRQFSEDIKLYAFKTSPRGYVYVRLDKLTNEYGCPSMEELECYNQEFKKRL 181
           R  SIA EVL QF  D++L++FKT+PRGY+YVRLDKL+N+YGCPSMEE+E YN E+KK+L
Sbjct: 135 RVLSIAREVLLQFGGDMELFSFKTTPRGYIYVRLDKLSNKYGCPSMEEIERYNLEYKKKL 194

Query: 182 DEVGALGEIPDDLALEVSSPGAERILKVPDDLSRFKDMPMRVFYTENTESNCSEGDGVFL 361
           DE+GALGEIP +LA+EVSSPGAER+LKVPDDL RFKDMPMRV Y E+ E+ C E DGVF+
Sbjct: 195 DEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFKDMPMRVSYVEDVETQCLEKDGVFM 254

Query: 362 LDSIEIDSEICVWKLANVKENRDPQRKGRPLSRKQKDW 475
           L+SI+ +S  CVWKLANV+ENRDP  KGRPLSRKQKDW
Sbjct: 255 LESIKTESANCVWKLANVRENRDPLGKGRPLSRKQKDW 292


>ref|XP_002273771.1| PREDICTED: uncharacterized protein LOC100259261 [Vitis vinifera]
          Length = 223

 Score =  244 bits (622), Expect = 7e-63
 Identities = 115/158 (72%), Positives = 137/158 (86%)
 Frame = +2

Query: 2   RAHSIAEEVLRQFSEDIKLYAFKTSPRGYVYVRLDKLTNEYGCPSMEELECYNQEFKKRL 181
           R  SIA EVL QF  D++L++FKT+PRGY+YVRLDKL+N+YGCPSMEE+E YN E+KK+L
Sbjct: 48  RVLSIAREVLLQFGGDMELFSFKTTPRGYIYVRLDKLSNKYGCPSMEEIERYNLEYKKKL 107

Query: 182 DEVGALGEIPDDLALEVSSPGAERILKVPDDLSRFKDMPMRVFYTENTESNCSEGDGVFL 361
           DE+GALGEIP +LA+EVSSPGAER+LKVPDDL RFKDMPMRV Y E+ E+ C E DGVF+
Sbjct: 108 DEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFKDMPMRVSYVEDVETQCLEKDGVFM 167

Query: 362 LDSIEIDSEICVWKLANVKENRDPQRKGRPLSRKQKDW 475
           L+SI+ +S  CVWKLANV+ENRDP  KGRPLSRKQKDW
Sbjct: 168 LESIKTESANCVWKLANVRENRDPLGKGRPLSRKQKDW 205


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