BLASTX nr result
ID: Glycyrrhiza23_contig00021806
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00021806
(677 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003612353.1| Pentatricopeptide repeat-containing protein ... 385 e-105
ref|XP_001785140.1| predicted protein [Physcomitrella patens sub... 144 2e-32
ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Sela... 143 4e-32
ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. l... 141 1e-31
ref|NP_193587.4| pentatricopeptide repeat-containing protein [Ar... 141 1e-31
>ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 795
Score = 385 bits (989), Expect = e-105
Identities = 193/225 (85%), Positives = 205/225 (91%)
Frame = +1
Query: 1 VVGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMC 180
VV SA+VDLYAKC DVSSCRKIFDSME+ KDNFVWSS+ISGYTMNNRG+EAV FFKDMC
Sbjct: 285 VVESAMVDLYAKCRDVSSCRKIFDSMEK--KDNFVWSSMISGYTMNNRGEEAVNFFKDMC 342
Query: 181 RQRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELG 360
RQR+K DQHVLSSTLKACVEIEDLNTGVQVHG M+K+GHQNDCFVASVLL LYA FGELG
Sbjct: 343 RQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELG 402
Query: 361 DAEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKS 540
D EKLF RIDDKDIVAWNSMILA AR GQG GR MQL QELRRTTFL+IQGATL+AVLKS
Sbjct: 403 DVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKS 462
Query: 541 CEDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
CE +SDLPAGRQIHS IVKSS+C HTLVGNALVHMYSEC+QI DA
Sbjct: 463 CEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDA 507
Score = 99.0 bits (245), Expect = 8e-19
Identities = 64/224 (28%), Positives = 116/224 (51%), Gaps = 2/224 (0%)
Frame = +1
Query: 7 GSALVDLYAKCGD-VSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCR 183
GS+LV +Y K GD + ++F + E +D W+ +ISG+ N + F +M
Sbjct: 187 GSSLVYMYLKGGDDLRDALRVFYGLLE--RDVVAWNVMISGFAQNGDFRMVQRLFSEMWE 244
Query: 184 QR-LKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELG 360
++ LKPD+ +S LK C LN +Q+HG + K G + D V S ++ LYA ++
Sbjct: 245 EQGLKPDRITFASLLKCC---SVLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVS 301
Query: 361 DAEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKS 540
K+F ++ KD W+SMI + +G + +++ R +++ L + LK+
Sbjct: 302 SCRKIFDSMEKKDNFVWSSMISGYTMNNRGE-EAVNFFKDMCRQR-VKLDQHVLSSTLKA 359
Query: 541 CEDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGD 672
C + DL G Q+H ++K+ + V + L+++Y+ ++GD
Sbjct: 360 CVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGD 403
Score = 92.8 bits (229), Expect = 5e-17
Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 2/223 (0%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCR 183
+ + L+ Y+K + K+FD M ++ W+++IS + +A + F M
Sbjct: 85 LANTLLSFYSKSSNFHYAHKLFDKMPN--RNVVTWTTLISSHLKYGSVSKAFEMFNHMRV 142
Query: 184 QRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLY-AGFGELG 360
+P+++ + L+AC E + G+Q+HG +V+ G + + F S L+ +Y G +L
Sbjct: 143 SDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLR 202
Query: 361 DAEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQ-LLQELRRTTFLRIQGATLIAVLK 537
DA ++F + ++D+VAWN MI A+ G R +Q L E+ L+ T ++LK
Sbjct: 203 DALRVFYGLLERDVVAWNVMISGFAQ--NGDFRMVQRLFSEMWEEQGLKPDRITFASLLK 260
Query: 538 SCEDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQI 666
C S L QIH + K +V +A+V +Y++CR +
Sbjct: 261 CC---SVLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDV 300
Score = 84.3 bits (207), Expect = 2e-14
Identities = 57/226 (25%), Positives = 112/226 (49%), Gaps = 2/226 (0%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRG-DEAVKFFKDMC 180
V S L++LYA G++ K+F +++ KD W+S+I +G ++ F+++
Sbjct: 387 VASVLLNLYASFGELGDVEKLFSRIDD--KDIVAWNSMILAQARPGQGCGRCMQLFQELR 444
Query: 181 RQR-LKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGEL 357
R L+ L + LK+C + DL G Q+H +VKS V + L+ +Y+ ++
Sbjct: 445 RTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQI 504
Query: 358 GDAEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLK 537
DA K F I KD +W+S I+ + + + ++L +E+ + +L +
Sbjct: 505 DDAFKAFVDIVRKDDSSWSS-IIGTCKQNRMESKALELCKEM-LDEGINFTSYSLPLCIS 562
Query: 538 SCEDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
+C + G+Q+H +KS +G++++ MY++C I ++
Sbjct: 563 ACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEES 608
Score = 79.0 bits (193), Expect = 8e-13
Identities = 46/181 (25%), Positives = 97/181 (53%)
Frame = +1
Query: 1 VVGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMC 180
+VG+ALV +Y++C + K F ++ KD+ WSS+I N +A++ K+M
Sbjct: 489 LVGNALVHMYSECKQIDDAFKAF--VDIVRKDDSSWSSIIGTCKQNRMESKALELCKEML 546
Query: 181 RQRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELG 360
+ + + L + AC ++ ++ G Q+H +KSG+ D ++ S ++ +YA G +
Sbjct: 547 DEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIE 606
Query: 361 DAEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKS 540
++EK+F + V +N++I +A G+ + +++L +L + + T +A++ +
Sbjct: 607 ESEKVFDEQLKPNEVTFNAIISGYAHHGKAQ-QAIEVLSKLEKNG-VAPNHVTFLALMSA 664
Query: 541 C 543
C
Sbjct: 665 C 665
Score = 59.7 bits (143), Expect = 5e-07
Identities = 32/128 (25%), Positives = 67/128 (52%)
Frame = +1
Query: 265 QVHGQMVKSGHQNDCFVASVLLTLYAGFGELGDAEKLFRRIDDKDIVAWNSMILAHARLG 444
Q+H Q++ + + + +A+ LL+ Y+ A KLF ++ ++++V W ++I +H + G
Sbjct: 69 QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 128
Query: 445 QGSGRPMQLLQELRRTTFLRIQGATLIAVLKSCEDESDLPAGRQIHSRIVKSSVCHHTLV 624
S + ++ + R + R T +L++C + G QIH +V+ +
Sbjct: 129 SVS-KAFEMFNHM-RVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFA 186
Query: 625 GNALVHMY 648
G++LV+MY
Sbjct: 187 GSSLVYMY 194
>ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 922
Score = 144 bits (363), Expect = 2e-32
Identities = 74/225 (32%), Positives = 132/225 (58%)
Frame = +1
Query: 1 VVGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMC 180
+VG+AL+ +YA+CG +++ R++FD++ + + W+++I+GY +EA + F+DM
Sbjct: 289 LVGNALISMYARCGSLANARQVFDNLRSPNRVS--WNAMIAGYGEGFM-EEAFRLFRDMQ 345
Query: 181 RQRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELG 360
++ +PD+ +S L C + DLN G ++H Q+V++ + D VA+ L+++YA G L
Sbjct: 346 QKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLE 405
Query: 361 DAEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKS 540
+A K+F ++ +K+ V+WN+ I R G Q+ +++RR + T I +L S
Sbjct: 406 EARKVFNQMPEKNAVSWNAFIACCCRHG-SEKEAFQVFKQMRRDDVIP-DHVTFITLLNS 463
Query: 541 CEDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
C D GR IH +I + + + LV NAL+ MY C ++ DA
Sbjct: 464 CTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADA 508
Score = 140 bits (354), Expect = 2e-31
Identities = 74/224 (33%), Positives = 129/224 (57%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCR 183
+ + L+ +Y+KCG + +F SME+ KD W+++ISGY ++ RG EAV F M R
Sbjct: 88 LNNMLISMYSKCGSIEDANNVFQSMED--KDVVSWNAMISGYALHGRGQEAVDLFYQMQR 145
Query: 184 QRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELGD 363
+ LKP+Q+ S L AC L G Q+H + K+G+++D V++ L+ +Y G L
Sbjct: 146 EGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLEL 205
Query: 364 AEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKSC 543
A K+F + ++++V+W +MI + + G S L Q+L R+ + + ++L +C
Sbjct: 206 ARKVFNEMRERNVVSWTAMISGYVQHGD-SKEAFVLFQKLIRSG-TQPNKVSFASILGAC 263
Query: 544 EDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
+ +DL G ++H+ I ++ + LVGNAL+ MY+ C + +A
Sbjct: 264 TNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANA 307
Score = 124 bits (310), Expect = 2e-26
Identities = 69/227 (30%), Positives = 130/227 (57%), Gaps = 3/227 (1%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCR 183
V +AL+++Y KCG + RK+F+ M E ++ W+++ISGY + EA F+ + R
Sbjct: 189 VSTALINMYCKCGSLELARKVFNEMRE--RNVVSWTAMISGYVQHGDSKEAFVLFQKLIR 246
Query: 184 QRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELGD 363
+P++ +S L AC DL G+++H + ++G + + V + L+++YA G L +
Sbjct: 247 SGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLAN 306
Query: 364 AEKLFRRIDDKDIVAWNSMILAHARLGQG-SGRPMQLLQELRRTTFL--RIQGATLIAVL 534
A ++F + + V+WN+MI A G+G +L +++++ F R A+L+A+
Sbjct: 307 ARQVFDNLRSPNRVSWNAMI---AGYGEGFMEEAFRLFRDMQQKGFQPDRFTYASLLAI- 362
Query: 535 KSCEDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
C D +DL G+++HS+IV+++ V AL+ MY++C + +A
Sbjct: 363 --CADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEA 407
Score = 119 bits (297), Expect = 7e-25
Identities = 71/224 (31%), Positives = 121/224 (54%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCR 183
V +AL+ +YAKCG + RK+F+ M E K+ W++ I+ + EA + FK M R
Sbjct: 390 VATALISMYAKCGSLEEARKVFNQMPE--KNAVSWNAFIACCCRHGSEKEAFQVFKQMRR 447
Query: 184 QRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELGD 363
+ PD + L +C ED G +HG++ + G ++ VA+ L+++Y G+L D
Sbjct: 448 DDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLAD 507
Query: 364 AEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKSC 543
A ++F RI +D+ +WN+MI A+ + G +G L + ++ + T I VL++
Sbjct: 508 AREVFYRIRRRDLGSWNAMIAAYVQHG-ANGSAFDLFIKY-KSEGGKGDKYTFINVLRAI 565
Query: 544 EDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
+ DL AGR+IH + K+ + + L+ MYS+C + DA
Sbjct: 566 ANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDA 609
Score = 102 bits (253), Expect = 9e-20
Identities = 51/202 (25%), Positives = 110/202 (54%)
Frame = +1
Query: 1 VVGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMC 180
+V +AL+ +Y +CG ++ R++F + + + W+++I+ Y + A F
Sbjct: 490 LVANALISMYGRCGKLADAREVFYRIRRRDLGS--WNAMIAAYVQHGANGSAFDLFIKYK 547
Query: 181 RQRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELG 360
+ K D++ + L+A +EDL+ G ++HG + K+G + D + + L+ +Y+ G L
Sbjct: 548 SEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLR 607
Query: 361 DAEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKS 540
DA +F+ + +KD+V WN+M+ A+ G ++L Q++ R + AT +VL +
Sbjct: 608 DAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQD-ALKLFQQM-RLEGVNPDSATYTSVLNA 665
Query: 541 CEDESDLPAGRQIHSRIVKSSV 606
C + G++ H+++ ++++
Sbjct: 666 CARLGAIEHGKKFHTQLKEAAM 687
Score = 87.8 bits (216), Expect = 2e-15
Identities = 46/145 (31%), Positives = 84/145 (57%)
Frame = +1
Query: 223 LKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELGDAEKLFRRIDDKDI 402
L+ CV+ + L G +VH M + + D ++ ++L+++Y+ G + DA +F+ ++DKD+
Sbjct: 58 LQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDV 117
Query: 403 VAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKSCEDESDLPAGRQIH 582
V+WN+MI +A G+G + L +++R L+ + I++L +C+ L G QIH
Sbjct: 118 VSWNAMISGYALHGRGQ-EAVDLFYQMQREG-LKPNQNSFISILSACQTPIVLEFGEQIH 175
Query: 583 SRIVKSSVCHHTLVGNALVHMYSEC 657
S I K+ V AL++MY +C
Sbjct: 176 SHITKAGYESDVNVSTALINMYCKC 200
Score = 70.1 bits (170), Expect = 4e-10
Identities = 34/141 (24%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = +1
Query: 10 SALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCRQR 189
+ L+ +Y+KCG + +F +++E KD W+++++ Y ++ G +A+K F+ M +
Sbjct: 594 TTLIKMYSKCGSLRDAYSVFKNVQE--KDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEG 651
Query: 190 LKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELGDAE 369
+ PD +S L AC + + G + H Q+ ++ + D + ++ L +AE
Sbjct: 652 VNPDSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETDTRHYACMVAALGRASLLKEAE 711
Query: 370 KLFRRI-DDKDIVAWNSMILA 429
+ I + D + W S+++A
Sbjct: 712 EFIEEISSESDALMWESLLVA 732
>ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein
SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 143 bits (360), Expect = 4e-32
Identities = 77/230 (33%), Positives = 135/230 (58%), Gaps = 5/230 (2%)
Frame = +1
Query: 1 VVGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMC 180
VVG+A++ +Y KCG + R F+ ++ K++ W+++++ Y ++ R EA++ F++MC
Sbjct: 67 VVGTAVISMYGKCGRLDDARAAFEELQW--KNSVTWNAMMTNYKLDGRDREALELFREMC 124
Query: 181 RQR--LKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQ--NDCFVASVLLTLYAGF 348
+ +PD+ S ++AC +EDL G ++H + + G + D V + LL +Y+
Sbjct: 125 ERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKC 184
Query: 349 GELGDAEKLFRRI-DDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLI 525
G+L +A K+F I D D V WN+MI A+A+ G+G + + L + + TT L + T +
Sbjct: 185 GDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGK-QALDLYRSMHDTTDLAPKQGTFV 243
Query: 526 AVLKSCEDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
V+ C + S L GR IH+R+ ++ + LV NALVHMY +C + +A
Sbjct: 244 TVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEA 293
Score = 72.8 bits (177), Expect = 6e-11
Identities = 49/191 (25%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Frame = +1
Query: 118 ISGYTMNNRGDEAVKFFKDMCRQRLKPDQHVLSSTLKACVEI--EDLNTGVQVHGQMVKS 291
++ ++ N EA+ FF+ M + +PD+ S L A ++ ++ G ++H S
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 292 GHQNDCFVASVLLTLYAGFGELGDAEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQL 471
G + V + ++++Y G L DA F + K+ V WN+M + + +L ++L
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAM-MTNYKLDGRDREALEL 119
Query: 472 LQEL-RRTTFLRIQGATLIAVLKSCEDESDLPAGRQIHSRIVKSSVCHH--TLVGNALVH 642
+E+ R+ R + +++C + DL GR+IH + + H +VG AL++
Sbjct: 120 FREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLN 179
Query: 643 MYSECRQIGDA 675
MYS+C + +A
Sbjct: 180 MYSKCGDLEEA 190
>ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 616
Score = 141 bits (356), Expect = 1e-31
Identities = 73/224 (32%), Positives = 129/224 (57%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCR 183
VG++L+D+YAKCG++S CRK+FD M ++ W+S+I+ + G+EA+ F+ M R
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSN--RNTVTWTSIIAAHAREGFGEEAISLFRVMKR 378
Query: 184 QRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELGD 363
+ L + + S L+AC + L G ++H Q++K+ + + ++ S L+ LY GE D
Sbjct: 379 RHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRD 438
Query: 364 AEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKSC 543
A + +++ +D+V+W +MI + LG S + L+E+ + + T + LK+C
Sbjct: 439 AFNVLQQLPSRDVVSWTAMISGCSSLGHES-EALDFLKEMIQEG-VEPNPFTYSSALKAC 496
Query: 544 EDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
+ L GR IHS K+ + VG+AL+HMY++C + +A
Sbjct: 497 ANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEA 540
Score = 140 bits (354), Expect = 2e-31
Identities = 76/225 (33%), Positives = 129/225 (57%)
Frame = +1
Query: 1 VVGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMC 180
+V S+LV YA+CG+++S + FD MEE KD W++VIS + G++A+ F M
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEE--KDVISWTAVISACSRKGHGNKAIFMFIGML 276
Query: 181 RQRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELG 360
P++ + S LKAC E + + G QVH +VK + D FV + L+ +YA GE+
Sbjct: 277 NHGFLPNEFTVCSILKACSEEKAIRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 361 DAEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKS 540
D K+F + +++ V W S+I AHAR +G G L + + L T++++L++
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAR--EGFGEEAISLFRVMKRRHLIANNLTVVSILRA 394
Query: 541 CEDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
C L G+++H++I+K+S+ + +G+ LV +Y +C + DA
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA 439
Score = 119 bits (299), Expect = 4e-25
Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 1/223 (0%)
Frame = +1
Query: 7 GSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCRQ 186
G+ L+ + GD+ RK+FDSM + ++ W+++I GY DEA F+D +
Sbjct: 120 GNNLISSCVRLGDLVYARKVFDSMPD--RNTVTWTAMIDGYLKFGLEDEAFSLFEDYVKH 177
Query: 187 RLK-PDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELGD 363
++ ++ + L C + G QVHG MVK G N V S L+ YA GEL
Sbjct: 178 GIRFTNERMFVCLLNLCSRRSEFELGRQVHGNMVKVGVGN-LIVESSLVYFYAQCGELTS 236
Query: 364 AEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKSC 543
A + F +++KD+++W ++I A +R G G+ + L FL + T+ ++LK+C
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGNKAIFMFIGMLNH-GFLPNE-FTVCSILKAC 294
Query: 544 EDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGD 672
+E + GRQ+HS +VK + VG +L+ MY++C +I D
Sbjct: 295 SEEKAIRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Score = 92.0 bits (227), Expect = 9e-17
Identities = 50/148 (33%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEE-EEKDNFVWSSVISGYTMNNRGDEAVKFFKDMC 180
+GS LV LY KCG+ R F+ +++ +D W+++ISG + EA+ F K+M
Sbjct: 422 IGSTLVWLYCKCGE---SRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 181 RQRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELG 360
++ ++P+ SS LKAC E L G +H K+ ++ FV S L+ +YA G +
Sbjct: 479 QEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVS 538
Query: 361 DAEKLFRRIDDKDIVAWNSMILAHARLG 444
+A ++F + +K++V+W +MI+ +AR G
Sbjct: 539 EAFRVFDSMPEKNLVSWKAMIMGYARNG 566
Score = 60.5 bits (145), Expect = 3e-07
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCR 183
VGSAL+ +YAKCG VS ++FDSM E K+ W ++I GY N EA+K M
Sbjct: 523 VGSALIHMYAKCGFVSEAFRVFDSMPE--KNLVSWKAMIMGYARNGFCREALKLMYRMEA 580
Query: 184 QRLKPDQHVLSSTLKACVEIE 246
+ + D ++ ++ L C +IE
Sbjct: 581 EGFEVDDYIFATILSTCGDIE 601
>ref|NP_193587.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236144|sp|Q0WNP3.1|PP319_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18520 gi|110738662|dbj|BAF01256.1| hypothetical
protein [Arabidopsis thaliana]
gi|332658657|gb|AEE84057.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 617
Score = 141 bits (356), Expect = 1e-31
Identities = 73/224 (32%), Positives = 129/224 (57%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCR 183
VG++L+D+YAKCG++S CRK+FD M ++ W+S+I+ + G+EA+ F+ M R
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSN--RNTVTWTSIIAAHAREGFGEEAISLFRIMKR 378
Query: 184 QRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELGD 363
+ L + + S L+AC + L G ++H Q++K+ + + ++ S L+ LY GE D
Sbjct: 379 RHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRD 438
Query: 364 AEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKSC 543
A + +++ +D+V+W +MI + LG S + L+E+ + + T + LK+C
Sbjct: 439 AFNVLQQLPSRDVVSWTAMISGCSSLGHES-EALDFLKEMIQEG-VEPNPFTYSSALKAC 496
Query: 544 EDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
+ L GR IHS K+ + VG+AL+HMY++C + +A
Sbjct: 497 ANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEA 540
Score = 140 bits (353), Expect = 2e-31
Identities = 77/225 (34%), Positives = 128/225 (56%)
Frame = +1
Query: 1 VVGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMC 180
+V S+LV YA+CG+++S + FD MEE KD W++VIS + G +A+ F M
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEE--KDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 181 RQRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELG 360
P++ + S LKAC E + L G QVH +VK + D FV + L+ +YA GE+
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 361 DAEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKS 540
D K+F + +++ V W S+I AHAR +G G L + + L T++++L++
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAR--EGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 541 CEDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGDA 675
C L G+++H++I+K+S+ + +G+ LV +Y +C + DA
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA 439
Score = 120 bits (302), Expect = 2e-25
Identities = 74/223 (33%), Positives = 120/223 (53%), Gaps = 1/223 (0%)
Frame = +1
Query: 7 GSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCRQ 186
G+ L+ + GD+ RK+FDSM E K+ W+++I GY DEA F+D +
Sbjct: 120 GNNLISSCVRLGDLVYARKVFDSMPE--KNTVTWTAMIDGYLKYGLEDEAFALFEDYVKH 177
Query: 187 RLK-PDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELGD 363
++ ++ + L C + G QVHG MVK G N V S L+ YA GEL
Sbjct: 178 GIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN-LIVESSLVYFYAQCGELTS 236
Query: 364 AEKLFRRIDDKDIVAWNSMILAHARLGQGSGRPMQLLQELRRTTFLRIQGATLIAVLKSC 543
A + F +++KD+++W ++I A +R G G + + + + FL + T+ ++LK+C
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGI-KAIGMFIGMLNHWFLPNE-FTVCSILKAC 294
Query: 544 EDESDLPAGRQIHSRIVKSSVCHHTLVGNALVHMYSECRQIGD 672
+E L GRQ+HS +VK + VG +L+ MY++C +I D
Sbjct: 295 SEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Score = 92.0 bits (227), Expect = 9e-17
Identities = 50/148 (33%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEE-EEKDNFVWSSVISGYTMNNRGDEAVKFFKDMC 180
+GS LV LY KCG+ R F+ +++ +D W+++ISG + EA+ F K+M
Sbjct: 422 IGSTLVWLYCKCGE---SRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 181 RQRLKPDQHVLSSTLKACVEIEDLNTGVQVHGQMVKSGHQNDCFVASVLLTLYAGFGELG 360
++ ++P+ SS LKAC E L G +H K+ ++ FV S L+ +YA G +
Sbjct: 479 QEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVS 538
Query: 361 DAEKLFRRIDDKDIVAWNSMILAHARLG 444
+A ++F + +K++V+W +MI+ +AR G
Sbjct: 539 EAFRVFDSMPEKNLVSWKAMIMGYARNG 566
Score = 60.5 bits (145), Expect = 3e-07
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +1
Query: 4 VGSALVDLYAKCGDVSSCRKIFDSMEEEEKDNFVWSSVISGYTMNNRGDEAVKFFKDMCR 183
VGSAL+ +YAKCG VS ++FDSM E K+ W ++I GY N EA+K M
Sbjct: 523 VGSALIHMYAKCGFVSEAFRVFDSMPE--KNLVSWKAMIMGYARNGFCREALKLMYRMEA 580
Query: 184 QRLKPDQHVLSSTLKACVEIE 246
+ + D ++ ++ L C +IE
Sbjct: 581 EGFEVDDYIFATILSTCGDIE 601