BLASTX nr result
ID: Glycyrrhiza23_contig00021791
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00021791 (288 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003599197.1| F-box family protein [Medicago truncatula] g... 111 5e-23 ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g... 97 1e-18 ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g... 96 3e-18 ref|XP_003537158.1| PREDICTED: F-box protein SKIP23-like [Glycin... 92 6e-17 ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 91 1e-16 >ref|XP_003599197.1| F-box family protein [Medicago truncatula] gi|355488245|gb|AES69448.1| F-box family protein [Medicago truncatula] Length = 423 Score = 111 bits (278), Expect = 5e-23 Identities = 54/99 (54%), Positives = 73/99 (73%), Gaps = 3/99 (3%) Frame = -1 Query: 288 PHVLDFNHLRVSDLGPEFVLGHSPPLSPNTSLYMEKVV---AATWQGKQQGPDFALLTIH 118 P V++FN RV DLG EFV+G+ + +SLYMEKV+ A W GK++ L TIH Sbjct: 141 PQVINFNEHRVIDLGREFVIGN---FNEYSSLYMEKVIVLDADMWGGKERCS--VLFTIH 195 Query: 117 VSGKLALFRSGDDRWTVIPDMPAPYDDVCIFRGRPCAVD 1 +SGK+A FR GD+RWT++P+MP+P+DDVC+F+GRP AVD Sbjct: 196 ISGKIAFFRCGDERWTIVPEMPSPFDDVCVFKGRPVAVD 234 >ref|XP_002313690.1| f-box family protein [Populus trichocarpa] gi|222850098|gb|EEE87645.1| f-box family protein [Populus trichocarpa] Length = 410 Score = 97.1 bits (240), Expect = 1e-18 Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 7/103 (6%) Frame = -1 Query: 288 PHVLDFNHLRVSDLGPEFVLGHSPPLSPNTS-------LYMEKVVAATWQGKQQGPDFAL 130 P VLD +LR+ +LG E+VL H PN+S LYMEKVV W + +F L Sbjct: 121 PRVLDLMNLRIRELGHEYVL-HHVSYKPNSSSFTDAGNLYMEKVVMI-WLNCET--EFVL 176 Query: 129 LTIHVSGKLALFRSGDDRWTVIPDMPAPYDDVCIFRGRPCAVD 1 LTIHVSGKLA+F+SGD RWT+I +MP+P+DDV +++GR AVD Sbjct: 177 LTIHVSGKLAMFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVD 219 >ref|XP_002305539.1| f-box family protein [Populus trichocarpa] gi|222848503|gb|EEE86050.1| f-box family protein [Populus trichocarpa] Length = 469 Score = 95.9 bits (237), Expect = 3e-18 Identities = 54/103 (52%), Positives = 69/103 (66%), Gaps = 7/103 (6%) Frame = -1 Query: 288 PHVLDFNHLRVSDLGPEFVLGHSPPLSPNTS-------LYMEKVVAATWQGKQQGPDFAL 130 P VLD +LR+ +LG E+VL H PN+S LYMEKVV W +F L Sbjct: 121 PRVLDLMNLRIRELGHEYVLHHLN-YKPNSSSFTDAGNLYMEKVVMI-WLNSLT--EFVL 176 Query: 129 LTIHVSGKLALFRSGDDRWTVIPDMPAPYDDVCIFRGRPCAVD 1 LTIHVSGKLA+F+SGD RWT+I +MP+P+DDV +++GR AVD Sbjct: 177 LTIHVSGKLAIFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVD 219 >ref|XP_003537158.1| PREDICTED: F-box protein SKIP23-like [Glycine max] Length = 368 Score = 91.7 bits (226), Expect = 6e-17 Identities = 51/93 (54%), Positives = 61/93 (65%) Frame = -1 Query: 279 LDFNHLRVSDLGPEFVLGHSPPLSPNTSLYMEKVVAATWQGKQQGPDFALLTIHVSGKLA 100 LD L DLG EF+L ++ SLY+EK+V ++ FALLTIHVSGKLA Sbjct: 111 LDLFTLPALDLGREFLLTNTR--HTRDSLYIEKLVFLPLTHRKDR--FALLTIHVSGKLA 166 Query: 99 LFRSGDDRWTVIPDMPAPYDDVCIFRGRPCAVD 1 LFRSG+D WTVIPDMP PYDDVC+F+G D Sbjct: 167 LFRSGEDGWTVIPDMPTPYDDVCVFKGNLYGAD 199 >ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis vinifera] Length = 387 Score = 90.9 bits (224), Expect = 1e-16 Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 4/100 (4%) Frame = -1 Query: 288 PHVLDFNHLRVSDLGPEFVLGHSPPLSPNT----SLYMEKVVAATWQGKQQGPDFALLTI 121 P DF+ LRV +LG E+VL + P SLYMEKV + G DF LLTI Sbjct: 120 PKTFDFSGLRVFELGQEYVLEYMDYRPPGNAYLGSLYMEKVAFCSGNGD----DFWLLTI 175 Query: 120 HVSGKLALFRSGDDRWTVIPDMPAPYDDVCIFRGRPCAVD 1 H+SGKLA+FRSGD +W +I DM +PYDDV F G+ AVD Sbjct: 176 HLSGKLAMFRSGDKKWMIIDDMQSPYDDVIFFDGKFYAVD 215