BLASTX nr result

ID: Glycyrrhiza23_contig00021761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021761
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1...   180   2e-43
ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]     175   5e-42
ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   162   5e-38
emb|CBI16972.3| unnamed protein product [Vitis vinifera]              145   5e-33
ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sat...   144   1e-32

>ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  180 bits (456), Expect = 2e-43
 Identities = 88/105 (83%), Positives = 95/105 (90%), Gaps = 1/105 (0%)
 Frame = -2

Query: 567 GLIMANSLNMTLRILYSAMFIKNYFQGST-FSFRGCLPSGWIILLLSGVITRISENVFLD 391
           GLIMANSLNMTLRILYSA+FIKNYFQGS+ FSF GCLPSGWI LLLSGVIT ISENV LD
Sbjct: 414 GLIMANSLNMTLRILYSAIFIKNYFQGSSSFSFYGCLPSGWIALLLSGVITLISENVLLD 473

Query: 390 RDNFWPTFMIHFSVGLACFCVSSYVIYCREKPFIKGIIRFHDHSD 256
           RDNF P+F++H SVGL CFCVSSYVIYCREKPFI+ IIRF+DH D
Sbjct: 474 RDNFXPSFILHLSVGLVCFCVSSYVIYCREKPFIRRIIRFNDHVD 518


>ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  175 bits (443), Expect = 5e-42
 Identities = 87/105 (82%), Positives = 93/105 (88%), Gaps = 1/105 (0%)
 Frame = -2

Query: 567 GLIMANSLNMTLRILYSAMFIKNYFQGST-FSFRGCLPSGWIILLLSGVITRISENVFLD 391
           GLI+ANSLNMTLRILYSA FIKNYFQGS+ FSF GCLPSGWI LLLSGVIT +SENV LD
Sbjct: 414 GLILANSLNMTLRILYSATFIKNYFQGSSSFSFCGCLPSGWITLLLSGVITLVSENVLLD 473

Query: 390 RDNFWPTFMIHFSVGLACFCVSSYVIYCREKPFIKGIIRFHDHSD 256
           RDNF  +FM H SVGLACFCVSSYVIYCREKPFI+ IIRF+DH D
Sbjct: 474 RDNFSLSFMFHLSVGLACFCVSSYVIYCREKPFIRRIIRFNDHVD 518


>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  162 bits (409), Expect = 5e-38
 Identities = 75/105 (71%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = -2

Query: 567 GLIMANSLNMTLRILYSAMFIKNYFQGST-FSFRGCLPSGWIILLLSGVITRISENVFLD 391
           GLI+ANSLNM LRI+YSA+FIK YFQ S+ FSF  CLPSGW +LL SGVIT ISE +FLD
Sbjct: 372 GLILANSLNMILRIIYSAVFIKYYFQDSSAFSFTSCLPSGWTVLLFSGVITLISEKLFLD 431

Query: 390 RDNFWPTFMIHFSVGLACFCVSSYVIYCREKPFIKGIIRFHDHSD 256
            +NFWPTF+IHFS+GL CFC+SS++IY RE+PFI  IIRF DH D
Sbjct: 432 HENFWPTFLIHFSIGLTCFCISSFIIYRRERPFINRIIRFRDHMD 476


>emb|CBI16972.3| unnamed protein product [Vitis vinifera]
          Length = 454

 Score =  145 bits (366), Expect = 5e-33
 Identities = 73/105 (69%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
 Frame = -2

Query: 567 GLIMANSLNMTLRILYSAMFIKNYFQGST-FSFRGCLPSGWIILLLSGVITRISENVFLD 391
           GL++ANSL +TLRI YS  FI  YFQGS  FSF  CLPSGW  LLLSGVITRISE  FLD
Sbjct: 350 GLVVANSLTITLRIAYSINFINRYFQGSPLFSFLSCLPSGWTYLLLSGVITRISERKFLD 409

Query: 390 RDNFWPTFMIHFSVGLACFCVSSYVIYCREKPFIKGIIRFHDHSD 256
            +NF  TF IHFS+GL CFC+SS VIY RE+P I  II FHDHSD
Sbjct: 410 PENFRQTFFIHFSIGLTCFCMSSVVIYRRERPLINKIIGFHDHSD 454


>ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sativus]
           gi|449520289|ref|XP_004167166.1| PREDICTED: protein RFT1
           homolog [Cucumis sativus]
          Length = 528

 Score =  144 bits (363), Expect = 1e-32
 Identities = 67/104 (64%), Positives = 79/104 (75%)
 Frame = -2

Query: 567 GLIMANSLNMTLRILYSAMFIKNYFQGSTFSFRGCLPSGWIILLLSGVITRISENVFLDR 388
           GLI ANS+NM LRI YSA+FIK YF+  +FSF  CLPSGWI LLLSGV+T ISE +FLD+
Sbjct: 425 GLIFANSINMILRITYSAIFIKGYFKNPSFSFNSCLPSGWIFLLLSGVLTLISERLFLDQ 484

Query: 387 DNFWPTFMIHFSVGLACFCVSSYVIYCREKPFIKGIIRFHDHSD 256
             FW TF +HFS+GLACF VS  +IY RE+ F   I+RF  HSD
Sbjct: 485 QKFWSTFSLHFSIGLACFLVSLCIIYRRERSFFNKIVRFRQHSD 528


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