BLASTX nr result

ID: Glycyrrhiza23_contig00021722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021722
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237079.1| uncharacterized protein LOC100500375 [Glycin...   214   1e-53
ref|XP_003627468.1| Ring-H2 zinc finger protein-like protein [Me...   198   5e-49
gb|AFK45086.1| unknown [Lotus japonicus]                              189   3e-46
ref|NP_001144642.1| uncharacterized protein LOC100277663 [Zea ma...    77   3e-12
gb|AFW86778.1| putative RING zinc finger domain superfamily prot...    76   4e-12

>ref|NP_001237079.1| uncharacterized protein LOC100500375 [Glycine max]
           gi|255630157|gb|ACU15432.1| unknown [Glycine max]
          Length = 144

 Score =  214 bits (544), Expect = 1e-53
 Identities = 101/145 (69%), Positives = 119/145 (82%)
 Frame = -2

Query: 566 MTTILNFFTIISIVAHSFQENMIQRLHKLYKHYGYAYAVKEADQGESDCCAVCLSQMCKG 387
           M +I  FFT I+ VA SFQ  MIQ LHKLYKHYGYA  VK+ ++ ESD C+VCLSQ+CKG
Sbjct: 1   MASIRAFFTAIAFVAQSFQNYMIQSLHKLYKHYGYAAEVKDNEEKESDYCSVCLSQICKG 60

Query: 386 EKVRSLPLCKHRYHADCIGAWLKNHTTCPLCRIKISDHISQNQQKQVKPFGESMVGLIQS 207
           EK +SLP+C HRYH DCIGAWLKNHTTCPLCR  I+DHI+Q + KQVK  GES+  LIQS
Sbjct: 61  EKAKSLPVCNHRYHVDCIGAWLKNHTTCPLCRNNITDHITQ-KHKQVKSLGESLFNLIQS 119

Query: 206 FSDVSVSLLYMILPSSITESFPLVH 132
           FSD+ V++LYM+LPS+ITESFPLVH
Sbjct: 120 FSDLLVAILYMMLPSTITESFPLVH 144


>ref|XP_003627468.1| Ring-H2 zinc finger protein-like protein [Medicago truncatula]
           gi|355521490|gb|AET01944.1| Ring-H2 zinc finger
           protein-like protein [Medicago truncatula]
          Length = 151

 Score =  198 bits (504), Expect = 5e-49
 Identities = 98/141 (69%), Positives = 116/141 (82%), Gaps = 2/141 (1%)
 Frame = -2

Query: 563 TTILNFFTIISIVAHSFQENMIQRLHKLYKHYGYAY-AVKEADQGESDCCAVCLSQMCKG 387
           TTIL F TI++++A+SFQEN+I+ L KLYK+Y Y   ++KE DQ ESDCC+VCLSQMC+G
Sbjct: 4   TTILKFLTIVALIAYSFQENIIKTLDKLYKNYFYVGGSMKEIDQSESDCCSVCLSQMCRG 63

Query: 386 EKVRSLPLCKHRYHADCIGAWLKNHTTCPLCRIKISDH-ISQNQQKQVKPFGESMVGLIQ 210
           EKVR LPLC HRYHADCIGAWLKN+TTCPLCR KIS+H  + N QK V PF ES+V LIQ
Sbjct: 64  EKVRVLPLCDHRYHADCIGAWLKNNTTCPLCRSKISNHSYNLNLQKLVNPFEESLVDLIQ 123

Query: 209 SFSDVSVSLLYMILPSSITES 147
           SFSD  V++LY IL SSITES
Sbjct: 124 SFSDALVTILYKILQSSITES 144


>gb|AFK45086.1| unknown [Lotus japonicus]
          Length = 128

 Score =  189 bits (480), Expect = 3e-46
 Identities = 92/125 (73%), Positives = 105/125 (84%), Gaps = 1/125 (0%)
 Frame = -2

Query: 503 MIQRLHKLYKHYGY-AYAVKEADQGESDCCAVCLSQMCKGEKVRSLPLCKHRYHADCIGA 327
           MIQ L+KLYK YGY A AVKEA+Q E + CAVCLSQ+CKGEKVRSLPLC HRYHADCIGA
Sbjct: 1   MIQSLYKLYKQYGYSAAAVKEAEQVEIEPCAVCLSQLCKGEKVRSLPLCNHRYHADCIGA 60

Query: 326 WLKNHTTCPLCRIKISDHISQNQQKQVKPFGESMVGLIQSFSDVSVSLLYMILPSSITES 147
           WL+ HTTCPLCR KI+D + Q+Q KQVKPF ESM+G++Q F+D  V+LL  ILPS ITES
Sbjct: 61  WLEYHTTCPLCRNKITDLVPQDQHKQVKPFRESMIGVVQIFTDPFVALLSTILPSCITES 120

Query: 146 FPLVH 132
           FPLVH
Sbjct: 121 FPLVH 125


>ref|NP_001144642.1| uncharacterized protein LOC100277663 [Zea mays]
           gi|195645012|gb|ACG41974.1| hypothetical protein [Zea
           mays]
          Length = 214

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 33/72 (45%), Positives = 44/72 (61%)
 Frame = -2

Query: 437 QGESDCCAVCLSQMCKGEKVRSLPLCKHRYHADCIGAWLKNHTTCPLCRIKISDHISQNQ 258
           +G S  CAVCL  +  GE VR LP C+H +H DC+ AWL+ H TCPLCR ++S     + 
Sbjct: 137 RGSSLLCAVCLDDVRGGEMVRQLPACRHLFHVDCVDAWLRAHRTCPLCRCQLSPRNDVST 196

Query: 257 QKQVKPFGESMV 222
           ++     GES V
Sbjct: 197 KRAATVVGESSV 208


>gb|AFW86778.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 216

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 32/72 (44%), Positives = 44/72 (61%)
 Frame = -2

Query: 437 QGESDCCAVCLSQMCKGEKVRSLPLCKHRYHADCIGAWLKNHTTCPLCRIKISDHISQNQ 258
           +G S  CAVCL  +  GE VR LP C+H +H DC+ AWL+ H TCPLCR ++S     + 
Sbjct: 139 RGSSLLCAVCLDDVRGGEMVRQLPACRHLFHVDCVDAWLRAHRTCPLCRCQLSPRNDVST 198

Query: 257 QKQVKPFGESMV 222
           ++     GES +
Sbjct: 199 KRAAAVVGESSI 210


Top