BLASTX nr result

ID: Glycyrrhiza23_contig00021715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021715
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593162.1| LL-diaminopimelate aminotransferase [Medicag...   193   1e-47
ref|XP_003531555.1| PREDICTED: LL-diaminopimelate aminotransfera...   185   3e-45
ref|XP_002268766.1| PREDICTED: LL-diaminopimelate aminotransfera...   130   1e-28
emb|CBI19107.3| unnamed protein product [Vitis vinifera]              122   3e-26
gb|ABR17603.1| unknown [Picea sitchensis]                             119   3e-25

>ref|XP_003593162.1| LL-diaminopimelate aminotransferase [Medicago truncatula]
           gi|355482210|gb|AES63413.1| LL-diaminopimelate
           aminotransferase [Medicago truncatula]
          Length = 440

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/101 (91%), Positives = 95/101 (94%)
 Frame = +2

Query: 2   VNRFSCTLKNQRVRIGHCTKVPRNGNMEKLQHGYLFPEIERHELMHLEKYPHANVIDLGI 181
           VNRFSCTL NQRVRIGH TKVPRN NMEKLQHGYLFPEIERHEL+HL+KYPHANVIDLGI
Sbjct: 18  VNRFSCTLSNQRVRIGHSTKVPRNVNMEKLQHGYLFPEIERHELLHLKKYPHANVIDLGI 77

Query: 182 GDTTEPLPTIVTSSMVDFVRGLSTIEGYKGYGPEQGEKALR 304
           GDTT+PLP IVTSSMVDFV GLST EGYKGYGPEQGEKALR
Sbjct: 78  GDTTKPLPAIVTSSMVDFVHGLSTAEGYKGYGPEQGEKALR 118


>ref|XP_003531555.1| PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like
           [Glycine max]
          Length = 449

 Score =  185 bits (470), Expect = 3e-45
 Identities = 90/102 (88%), Positives = 93/102 (91%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2   VNRFSCTLK-NQRVRIGHCTKVPRNGNMEKLQHGYLFPEIERHELMHLEKYPHANVIDLG 178
           + R SCTLK +Q VRIGHCTKVPRN NMEKLQHGYLFPEIERHELMHLE YPHANVIDLG
Sbjct: 22  IARLSCTLKTHQNVRIGHCTKVPRNVNMEKLQHGYLFPEIERHELMHLEMYPHANVIDLG 81

Query: 179 IGDTTEPLPTIVTSSMVDFVRGLSTIEGYKGYGPEQGEKALR 304
           IGDTT+PLPTIVTSSMVDFV GLST  GYKGYGPEQGEKALR
Sbjct: 82  IGDTTQPLPTIVTSSMVDFVHGLSTATGYKGYGPEQGEKALR 123


>ref|XP_002268766.1| PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic
           [Vitis vinifera] gi|296081525|emb|CBI20048.3| unnamed
           protein product [Vitis vinifera]
          Length = 440

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/95 (67%), Positives = 75/95 (78%)
 Frame = +2

Query: 20  TLKNQRVRIGHCTKVPRNGNMEKLQHGYLFPEIERHELMHLEKYPHANVIDLGIGDTTEP 199
           +LK Q   IG CT+V RN NMEKL++GYLFPEI   EL H++KYP+A VI LGIGDTTEP
Sbjct: 24  SLKVQEDGIGVCTRVTRNLNMEKLRNGYLFPEIAMRELEHMKKYPNAKVISLGIGDTTEP 83

Query: 200 LPTIVTSSMVDFVRGLSTIEGYKGYGPEQGEKALR 304
           +P IVTSSM +  R LST+EGY+GYG EQG KALR
Sbjct: 84  IPDIVTSSMANHARRLSTVEGYRGYGAEQGNKALR 118


>emb|CBI19107.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/88 (64%), Positives = 68/88 (77%)
 Frame = +2

Query: 41  RIGHCTKVPRNGNMEKLQHGYLFPEIERHELMHLEKYPHANVIDLGIGDTTEPLPTIVTS 220
           R+GH TKVPRN NME+L++GYLF EI R EL H +KYPHA +I LGIGDTTEP+P I+TS
Sbjct: 54  RVGHGTKVPRNINMERLRNGYLFSEICRRELEHTQKYPHAKLIKLGIGDTTEPIPDIITS 113

Query: 221 SMVDFVRGLSTIEGYKGYGPEQGEKALR 304
           +M +    LSTI GY+GYG EQG   LR
Sbjct: 114 AMAEHAHALSTIRGYRGYGAEQGNMELR 141


>gb|ABR17603.1| unknown [Picea sitchensis]
          Length = 471

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/85 (65%), Positives = 65/85 (76%)
 Frame = +2

Query: 50  HCTKVPRNGNMEKLQHGYLFPEIERHELMHLEKYPHANVIDLGIGDTTEPLPTIVTSSMV 229
           + TKV RNGN+ KLQ GYLFPEI R    H++KYP ANVI LGIGDTTEP+P ++TS+M 
Sbjct: 65  YTTKVLRNGNIAKLQAGYLFPEIGRRRSAHMQKYPDANVISLGIGDTTEPIPEVITSAMA 124

Query: 230 DFVRGLSTIEGYKGYGPEQGEKALR 304
              + LSTIEGY GYG EQGEK LR
Sbjct: 125 QRAQALSTIEGYSGYGAEQGEKVLR 149


Top