BLASTX nr result

ID: Glycyrrhiza23_contig00021714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021714
         (1403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540543.1| PREDICTED: 60S ribosomal protein L3-like [Gl...   704   0.0  
ref|XP_003534345.1| PREDICTED: 60S ribosomal protein L3-like [Gl...   698   0.0  
emb|CBI18223.3| unnamed protein product [Vitis vinifera]              695   0.0  
ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vi...   695   0.0  
ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|1...   693   0.0  

>ref|XP_003540543.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  704 bits (1817), Expect = 0.0
 Identities = 346/389 (88%), Positives = 355/389 (91%)
 Frame = +2

Query: 62   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTHIVREV 241
            MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PCRLTAFVGYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTAFVGYKAGMTHIVREV 60

Query: 242  EKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRTLNTVWAQHLSEEVKRRFYK 421
            EKPGSKLHKKETCEAVTIIETPPL         KTPRGLRTLNT+WAQHLSEEVKRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHLSEEVKRRFYK 120

Query: 422  NWCXXXXXXXXXXXXXXXXXXXXXDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 601
            NWC                     DIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180

Query: 602  LMEIQVNGGTIAQKVDYAYSFFEKQIPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 781
            LMEIQVNGGT+ QKVDYAYSFFEKQIPV+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 782  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKSGQETHAAIT 961
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKV K+ QE+H+AIT
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKADQESHSAIT 300

Query: 962  EFDRTDKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 1141
            EFDRT+KDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL
Sbjct: 301  EFDRTEKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 1142 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 1228
            KFIDTSSKFGHGRFQTTQEK KFYGRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKHKFYGRLKA 389


>ref|XP_003534345.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  698 bits (1801), Expect = 0.0
 Identities = 343/389 (88%), Positives = 353/389 (90%)
 Frame = +2

Query: 62   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTHIVREV 241
            MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PC LTAFVGYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCGLTAFVGYKAGMTHIVREV 60

Query: 242  EKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRTLNTVWAQHLSEEVKRRFYK 421
            EKPGSKLHKKETCEAVTIIETPPL         KTPRGLRTLNTVWAQHLSEEVKRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 422  NWCXXXXXXXXXXXXXXXXXXXXXDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 601
            NWC                     DIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180

Query: 602  LMEIQVNGGTIAQKVDYAYSFFEKQIPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 781
            LMEIQVNGGT+ QKVDYAYSFFEKQIPV+AVF KDEMIDI+GVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFHKDEMIDIVGVTKGKGYEGVVTRWGVTR 240

Query: 782  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKSGQETHAAIT 961
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKV K+  E+H+AIT
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKADHESHSAIT 300

Query: 962  EFDRTDKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 1141
            EFDRT+KDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLR+SLLKQTSRVALEEIKL
Sbjct: 301  EFDRTEKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRRSLLKQTSRVALEEIKL 360

Query: 1142 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 1228
            KFIDTSSKFGHGRFQTTQEKQKFYGRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389


>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  695 bits (1793), Expect = 0.0
 Identities = 333/394 (84%), Positives = 357/394 (90%)
 Frame = +2

Query: 47   LK*EKMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTH 226
            L+  +MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPCRLTAF+GYKAGMTH
Sbjct: 56   LRRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH 115

Query: 227  IVREVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRTLNTVWAQHLSEEVK 406
            IVREVEKPGSKLHKKETCEAVTI+ETPP+         KTPRGLR+LNTVWAQHLSEEVK
Sbjct: 116  IVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVK 175

Query: 407  RRFYKNWCXXXXXXXXXXXXXXXXXXXXXDIESQLEKLKKYATVIRVLAHTQIRKLKGLK 586
            RRFYKNWC                      I++QLEK+KKYA+VIRVLAHTQIRK+KGLK
Sbjct: 176  RRFYKNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLK 235

Query: 587  QKKAHLMEIQVNGGTIAQKVDYAYSFFEKQIPVEAVFQKDEMIDIIGVTKGKGYEGVVTR 766
            QKKAHLMEIQVNGGTIAQKVDYAY FFEKQ+PV+A+FQKDEMIDIIGVTKGKGYEGVVTR
Sbjct: 236  QKKAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTR 295

Query: 767  WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKSGQET 946
            WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYK+GK  QE+
Sbjct: 296  WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQES 355

Query: 947  HAAITEFDRTDKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVAL 1126
            H A+TEFDRT+KDITPMGGFPHYGVVKDDY+M+KGCCVGPKKRV+TLRQSLLKQTSRVAL
Sbjct: 356  HTALTEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVAL 415

Query: 1127 EEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 1228
            EEIKLKFIDTSSKFGHGRFQTTQEKQKFYGR+KA
Sbjct: 416  EEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRMKA 449


>ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
          Length = 397

 Score =  695 bits (1793), Expect = 0.0
 Identities = 333/394 (84%), Positives = 357/394 (90%)
 Frame = +2

Query: 47   LK*EKMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTH 226
            L+  +MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPCRLTAF+GYKAGMTH
Sbjct: 4    LRRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH 63

Query: 227  IVREVEKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRTLNTVWAQHLSEEVK 406
            IVREVEKPGSKLHKKETCEAVTI+ETPP+         KTPRGLR+LNTVWAQHLSEEVK
Sbjct: 64   IVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVK 123

Query: 407  RRFYKNWCXXXXXXXXXXXXXXXXXXXXXDIESQLEKLKKYATVIRVLAHTQIRKLKGLK 586
            RRFYKNWC                      I++QLEK+KKYA+VIRVLAHTQIRK+KGLK
Sbjct: 124  RRFYKNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLK 183

Query: 587  QKKAHLMEIQVNGGTIAQKVDYAYSFFEKQIPVEAVFQKDEMIDIIGVTKGKGYEGVVTR 766
            QKKAHLMEIQVNGGTIAQKVDYAY FFEKQ+PV+A+FQKDEMIDIIGVTKGKGYEGVVTR
Sbjct: 184  QKKAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTR 243

Query: 767  WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKSGQET 946
            WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYK+GK  QE+
Sbjct: 244  WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQES 303

Query: 947  HAAITEFDRTDKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVAL 1126
            H A+TEFDRT+KDITPMGGFPHYGVVKDDY+M+KGCCVGPKKRV+TLRQSLLKQTSRVAL
Sbjct: 304  HTALTEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVAL 363

Query: 1127 EEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 1228
            EEIKLKFIDTSSKFGHGRFQTTQEKQKFYGR+KA
Sbjct: 364  EEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRMKA 397


>ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|118481111|gb|ABK92509.1|
            unknown [Populus trichocarpa] gi|222856157|gb|EEE93704.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  693 bits (1789), Expect = 0.0
 Identities = 331/389 (85%), Positives = 354/389 (91%)
 Frame = +2

Query: 62   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTHIVREV 241
            MSHRKFEHPRHGSLGFLPRKRA+RHRGKVK+FPKDDP+KPC+LT+F+GYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPTKPCKLTSFLGYKAGMTHIVREV 60

Query: 242  EKPGSKLHKKETCEAVTIIETPPLXXXXXXXXXKTPRGLRTLNTVWAQHLSEEVKRRFYK 421
            EKPGSKLHKKETCEAVTI+ETPP+         KTP GLRTLNTVWAQHLSEEVKRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYLKTPSGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 422  NWCXXXXXXXXXXXXXXXXXXXXXDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 601
            NWC                      I+SQLEKLKKYATVIRVLAHTQIRK+KGLKQKKAH
Sbjct: 121  NWCKSKKKAFAKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 602  LMEIQVNGGTIAQKVDYAYSFFEKQIPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 781
            LMEIQVNGGTIAQKVD+AY FFEKQ+P++AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240

Query: 782  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKSGQETHAAIT 961
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGK GQETH AIT
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKVGQETHTAIT 300

Query: 962  EFDRTDKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 1141
            E+DRT+KDITP+GGFPHYGVVKDDY+M+KGCCVGPKKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 301  EYDRTEKDITPLGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 1142 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 1228
            KF+DTSSKFGHGRFQTTQEKQKFYGRLKA
Sbjct: 361  KFVDTSSKFGHGRFQTTQEKQKFYGRLKA 389


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