BLASTX nr result

ID: Glycyrrhiza23_contig00021686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021686
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599982.1| Microtubule-associated protein TORTIFOLIA1 [...   250   1e-64
ref|XP_003553106.1| PREDICTED: microtubule-associated protein TO...   230   1e-58
emb|CBI26604.3| unnamed protein product [Vitis vinifera]              161   8e-38
ref|XP_002522990.1| conserved hypothetical protein [Ricinus comm...   156   3e-36
ref|XP_002281360.2| PREDICTED: microtubule-associated protein TO...   155   6e-36

>ref|XP_003599982.1| Microtubule-associated protein TORTIFOLIA1 [Medicago truncatula]
           gi|355489030|gb|AES70233.1| Microtubule-associated
           protein TORTIFOLIA1 [Medicago truncatula]
          Length = 924

 Score =  250 bits (638), Expect = 1e-64
 Identities = 130/190 (68%), Positives = 138/190 (72%)
 Frame = -3

Query: 572 PTLAVLEACRFDKIKPVRDSMAETLQLWKKIAGKGDGSHDSKPSSRDGGNPEPAVSSETS 393
           PT+ +LEACR DKI+PVRDSM E L LWKKIAGK   SHDSKP S DGGNPEPAV +ETS
Sbjct: 289 PTVTLLEACRVDKIRPVRDSMTEALDLWKKIAGKDGSSHDSKPLSSDGGNPEPAVLTETS 348

Query: 392 NLKNVNPDERKTDPSVKXXXXXXXXXXXTAKAKAAGISEKAVVILKKKAPALTDKELNLE 213
           +LKNVNPDERKTDPSVK            +KAKAA ISEKAVVILKKK P L DK LN E
Sbjct: 349 DLKNVNPDERKTDPSVKDLPTSSSNTDSNSKAKAASISEKAVVILKKKPPVLNDKVLNPE 408

Query: 212 FFQKLERRGSDDLPVEVVVPRRCLXXXXXXXXXXXXXXAKDSKERINSAGNTPNDDFHGS 33
           FFQ LERR  DDLPVEVVVPR+CL              AKDS ER N+ GN PND FHGS
Sbjct: 409 FFQNLERRDLDDLPVEVVVPRKCLNSSSSNNDEESKATAKDSNERTNATGNVPNDGFHGS 468

Query: 32  VNNKYHILER 3
           VNNKYH LER
Sbjct: 469 VNNKYHGLER 478


>ref|XP_003553106.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Glycine
           max]
          Length = 923

 Score =  230 bits (586), Expect = 1e-58
 Identities = 132/191 (69%), Positives = 137/191 (71%)
 Frame = -3

Query: 575 APTLAVLEACRFDKIKPVRDSMAETLQLWKKIAGKGDGSHDSKPSSRDGGNPEPAVSSET 396
           APTLAVLEACRFDKIKPVRDS+ E LQLWKKIAGKGDGS D    S DGGN E A+SSE 
Sbjct: 286 APTLAVLEACRFDKIKPVRDSINEALQLWKKIAGKGDGSPDDSKPSSDGGN-ESAISSEA 344

Query: 395 SNLKNVNPDERKTDPSVKXXXXXXXXXXXTAKAKAAGISEKAVVILKKKAPALTDKELNL 216
           S+ K VN DERKTD  VK             KAKAA ISEKAVVILKKK P L+DKELN 
Sbjct: 345 SDPKKVNLDERKTDSPVKGSSTSSSNMDS-TKAKAASISEKAVVILKKKPPVLSDKELNP 403

Query: 215 EFFQKLERRGSDDLPVEVVVPRRCLXXXXXXXXXXXXXXAKDSKERINSAGNTPNDDFHG 36
           EFFQKLERRGSDDLPVEVVVPRR L              AKDSKERINS GN PNDD HG
Sbjct: 404 EFFQKLERRGSDDLPVEVVVPRRGLNSSNSNNEEESEANAKDSKERINSVGNIPNDD-HG 462

Query: 35  SVNNKYHILER 3
           S +NKY I ER
Sbjct: 463 SSSNKYRIFER 473


>emb|CBI26604.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  161 bits (407), Expect = 8e-38
 Identities = 103/186 (55%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
 Frame = -3

Query: 569 TLAVLEACRFDKIKPVRDSMAETLQLWKKIAGKGDG-SHDSKPSSRDGGNPEPAVSSETS 393
           TLA LEACRFDKIKPVRDSM E LQLWKK+AGKGDG S D K +S DG N EPA  S+ +
Sbjct: 149 TLAALEACRFDKIKPVRDSMTEALQLWKKVAGKGDGVSDDQKATSHDGENSEPAEFSDKN 208

Query: 392 NLKNVNPDERKTDPSVKXXXXXXXXXXXTAKAKAAGISEKAVVILKKKAP-ALTDKELNL 216
             K  NP ERK + S K                    S  AV ILKKK P ALTDKELN 
Sbjct: 209 GPKVSNPGERKAEASGKD-------------------SSNAVGILKKKVPAALTDKELNP 249

Query: 215 EFFQKLERRGSDDLPVEVVVPRRCLXXXXXXXXXXXXXXAKDSKERINSAGNTPNDDFHG 36
           EFFQKLE RGSDDLPVEVVVPRRCL                D + R N       DD HG
Sbjct: 250 EFFQKLETRGSDDLPVEVVVPRRCLNSANSHNEEESEPNDADLRGRSNL---MEPDDVHG 306

Query: 35  S-VNNK 21
           S VN K
Sbjct: 307 SRVNGK 312


>ref|XP_002522990.1| conserved hypothetical protein [Ricinus communis]
           gi|223537802|gb|EEF39420.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 936

 Score =  156 bits (394), Expect = 3e-36
 Identities = 97/191 (50%), Positives = 117/191 (61%), Gaps = 2/191 (1%)
 Frame = -3

Query: 569 TLAVLEACRFDKIKPVRDSMAETLQLWKKIAGKG-DGSHDSKPSSRDGGNPEPAVSSETS 393
           TL VLE+CRFDKIKPVRDSM E LQ WKKIAGK  DG  D + +S           +E+S
Sbjct: 312 TLTVLESCRFDKIKPVRDSMTEALQQWKKIAGKAEDGVLDDQKASS---------CAESS 362

Query: 392 NLKNVNPDERKTDPSVKXXXXXXXXXXXTA-KAKAAGISEKAVVILKKKAPALTDKELNL 216
           + K  NPD++KT+   K           +  K+KA  I +KAVVILKKKAPALTDK+LN 
Sbjct: 363 SDKIPNPDDQKTESLAKDSTRGSSPNMDSVPKSKAGSIPDKAVVILKKKAPALTDKDLNP 422

Query: 215 EFFQKLERRGSDDLPVEVVVPRRCLXXXXXXXXXXXXXXAKDSKERINSAGNTPNDDFHG 36
           EFFQKLE RGS DLPVEVVV RRC+                +S+ R N   N+ +DD HG
Sbjct: 423 EFFQKLETRGSGDLPVEVVVSRRCI-TSSNLNEEEPELHDSESRGRSNRLANSQSDDLHG 481

Query: 35  SVNNKYHILER 3
           S  +KY  +ER
Sbjct: 482 SF-SKYRNIER 491


>ref|XP_002281360.2| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Vitis
           vinifera]
          Length = 904

 Score =  155 bits (391), Expect = 6e-36
 Identities = 92/146 (63%), Positives = 99/146 (67%), Gaps = 3/146 (2%)
 Frame = -3

Query: 569 TLAVLEACRFDKIKPVRDSMAETLQLWKKIAGKGDG-SHDSKPSSRDGGNPEPAVSSETS 393
           TLA LEACRFDKIKPVRDSM E LQLWKK+AGKGDG S D K +S      EPA  S+ +
Sbjct: 294 TLAALEACRFDKIKPVRDSMTEALQLWKKVAGKGDGVSDDQKATSH-----EPAEFSDKN 348

Query: 392 NLKNVNPDERKTDPSVK-XXXXXXXXXXXTAKAKAAGISEKAVVILKKKAP-ALTDKELN 219
             K  NP ERK + S K             +K K   I +KAV ILKKK P ALTDKELN
Sbjct: 349 GPKVSNPGERKAEASGKDSSNGSSPANDSVSKTKGGSIPDKAVGILKKKVPAALTDKELN 408

Query: 218 LEFFQKLERRGSDDLPVEVVVPRRCL 141
            EFFQKLE RGSDDLPVEVVVPRRCL
Sbjct: 409 PEFFQKLETRGSDDLPVEVVVPRRCL 434


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