BLASTX nr result

ID: Glycyrrhiza23_contig00021658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021658
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|35547...   167   2e-39
ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552...   164   1e-38
ref|XP_003637820.1| F-box/kelch-repeat protein, partial [Medicag...   161   9e-38
ref|XP_003637832.1| F-box protein [Medicago truncatula] gi|35550...   158   1e-36
ref|XP_003637797.1| F-box protein [Medicago truncatula] gi|35550...   157   1e-36

>ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|355477502|gb|AES58705.1|
           F-box protein [Medicago truncatula]
          Length = 403

 Score =  167 bits (423), Expect = 2e-39
 Identities = 91/156 (58%), Positives = 113/156 (72%), Gaps = 4/156 (2%)
 Frame = -2

Query: 458 KMEKSMMSQTIEKVSNQHIPTDLAFSILSKLPPKSLKRFGCVHKSWAHLFENTHFMSLYR 279
           +ME SM+     KV N+HIP DL F +LSKLP KSLKRFGCV KS+A LFEN +FM++Y 
Sbjct: 6   RMENSMVVAN-GKV-NKHIPNDLIFFVLSKLPLKSLKRFGCVSKSYALLFENPNFMNMYC 63

Query: 278 NNFLSNNHSYYNDTCRVL---LQQTPDRDNSVLHLLSGERLENRVKLDYPPPFQEDKRGI 108
           NNF+SN+ SY +DTC +L   +      ++SV++LLSGER EN VK+D PPPF +D   I
Sbjct: 64  NNFISNSPSYCDDTCLLLQEIISPNSTEEHSVMYLLSGERFENVVKIDLPPPFCKDDYDI 123

Query: 107 LMLGSV-VNGTLCLYQEDVRIVLWNPTTEKFKVIPP 3
            +LGSV VNGT CL Q D   +LWNPTTE+FK IPP
Sbjct: 124 HILGSVSVNGTFCLMQLDKYFLLWNPTTEEFKAIPP 159


>ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1|
           F-box protein [Medicago truncatula]
          Length = 384

 Score =  164 bits (416), Expect = 1e-38
 Identities = 83/147 (56%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
 Frame = -2

Query: 440 MSQTIEKVSNQHIPTDLAFSILSKLPPKSLKRFGCVHKSWAHLFENTHFMSLYRNNFLSN 261
           M+ + +KVSN HIP D+AF ILSKL  K+LKRF CV KSW HLFEN +F+S++ NNF+  
Sbjct: 1   MASSDDKVSN-HIPDDVAFFILSKLSLKALKRFTCVRKSWVHLFENPNFISMFCNNFILK 59

Query: 260 NHSYYNDTCRVLLQQTPDR-DNSVLHLLSGERLENRVKLDYPPPFQEDKRGILMLGSVVN 84
           +HS+Y+DTC +L Q  P    +  L+LLSGE  EN+V L++PPPFQ D   + +LGS +N
Sbjct: 60  DHSFYDDTCLLLKQTVPGHYYHCALYLLSGENFENKVILNWPPPFQADDIDMDILGSGIN 119

Query: 83  GTLCLYQEDVRIVLWNPTTEKFKVIPP 3
           GTLCL++    IVLWNPT  +FKVIPP
Sbjct: 120 GTLCLHRYHRTIVLWNPTIGEFKVIPP 146


>ref|XP_003637820.1| F-box/kelch-repeat protein, partial [Medicago truncatula]
           gi|355503755|gb|AES84958.1| F-box/kelch-repeat protein,
           partial [Medicago truncatula]
          Length = 209

 Score =  161 bits (408), Expect = 9e-38
 Identities = 90/154 (58%), Positives = 114/154 (74%), Gaps = 3/154 (1%)
 Frame = -2

Query: 455 MEKSMMSQTIEKVSNQHIPTDLAFSILSKLPPKSLKRFGCVHKSWAHLFENTHFMSLYRN 276
           M +S  S   EKVSN HI  DLAFSILSKLP KSLKRF CV KSW+ LFEN++F+++YRN
Sbjct: 1   MMQSTDSVIAEKVSN-HIHDDLAFSILSKLPLKSLKRFSCVRKSWSCLFENSNFLNMYRN 59

Query: 275 NFLSNNHSYYNDTCRVLLQQT-PDRDN-SVLHLLSGERLENRVKLDYPPPFQEDKRGILM 102
            F+S+  +Y  D   +LLQQT P   N  VL+LL GER EN+VKL++PPPFQED   I +
Sbjct: 60  YFISS--TYEEDGPCLLLQQTLPYLPNLHVLYLLFGERFENKVKLNWPPPFQEDNIAIHI 117

Query: 101 LGSVVNGTLCLYQ-EDVRIVLWNPTTEKFKVIPP 3
           LG V+NG +CLYQ  +  ++LWNP TE++KV+PP
Sbjct: 118 LGPVINGIVCLYQGREPVVILWNPATEEYKVLPP 151


>ref|XP_003637832.1| F-box protein [Medicago truncatula] gi|355503767|gb|AES84970.1|
           F-box protein [Medicago truncatula]
          Length = 392

 Score =  158 bits (399), Expect = 1e-36
 Identities = 86/152 (56%), Positives = 109/152 (71%), Gaps = 1/152 (0%)
 Frame = -2

Query: 455 MEKSMMSQTIEKVSNQHIPTDLAFSILSKLPPKSLKRFGCVHKSWAHLFENTHFMSLYRN 276
           M +S  S T EKVSN +I  DLAFSILSKLP KSLKRF CV KSW+ LFEN +FM++YRN
Sbjct: 1   MMRSTNSVTAEKVSN-YIHDDLAFSILSKLPLKSLKRFSCVRKSWSRLFENPNFMNMYRN 59

Query: 275 NFLSNNHSYYNDTCRVLLQQTPDRDNSVLHLLSGERLENRVKLDYPPPFQEDKRGILMLG 96
            F+S+  +Y  D    +L +     + VL+LL GER EN+VKLD+PPPFQED  GI +LG
Sbjct: 60  YFISS--TYEEDGSYPVLMRR--MVHHVLYLLFGERFENKVKLDWPPPFQEDNIGIHILG 115

Query: 95  SVVNGTLCLYQ-EDVRIVLWNPTTEKFKVIPP 3
            V+N   CLYQ  +  ++LWNP TE++KV+PP
Sbjct: 116 PVINDNFCLYQGREPVVILWNPGTEEYKVLPP 147


>ref|XP_003637797.1| F-box protein [Medicago truncatula] gi|355503732|gb|AES84935.1|
           F-box protein [Medicago truncatula]
          Length = 426

 Score =  157 bits (398), Expect = 1e-36
 Identities = 85/153 (55%), Positives = 108/153 (70%), Gaps = 3/153 (1%)
 Frame = -2

Query: 455 MEKSMMSQTIEKVSNQHIPTDLAFSILSKLPPKSLKRFGCVHKSWAHLFENTHFMSLYRN 276
           MEKS+ +   EKVSN HI  D+AFSILSKLP KSLKRF CVHKSW+ LFEN +FM++YRN
Sbjct: 1   MEKSIST---EKVSN-HIHNDIAFSILSKLPLKSLKRFSCVHKSWSRLFENPNFMNMYRN 56

Query: 275 NFLSNNHSYYNDTCRVLLQQT---PDRDNSVLHLLSGERLENRVKLDYPPPFQEDKRGIL 105
           N +S+     +D   +LLQQT   P   + +L+LLSGER EN+VKL  P PF++      
Sbjct: 57  NVISSE----DDGSCLLLQQTLPYPHYHSHMLYLLSGERFENKVKLGSPTPFRKSDNPGF 112

Query: 104 MLGSVVNGTLCLYQEDVRIVLWNPTTEKFKVIP 6
           +LG V+NG +CLYQ    +VLWNPT  +FKV+P
Sbjct: 113 ILGPVINGIVCLYQSGTNVVLWNPTNGEFKVLP 145


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