BLASTX nr result

ID: Glycyrrhiza23_contig00021640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021640
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|2...   228   5e-58
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   227   7e-58
emb|CAN67999.1| hypothetical protein VITISV_025803 [Vitis vinifera]   227   7e-58
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   224   6e-57
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]         221   4e-56

>ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|222864729|gb|EEF01860.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  228 bits (580), Expect = 5e-58
 Identities = 108/129 (83%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
 Frame = -2

Query: 384 YYKPVKHGG-TITSDGDRSVIIGESGVSYLLPGAPFEFQYSYSETPKAKPLAIREPAFLP 208
           YYKPVK GG  I SDGDRSV++G+SGVSYLLPGAPFEFQ+SYSETPK KPLAIREPAFLP
Sbjct: 15  YYKPVKDGGGVIASDGDRSVLVGDSGVSYLLPGAPFEFQFSYSETPKVKPLAIREPAFLP 74

Query: 207 FAPPSMPRPWTGKAPLXXXXXKIPVFDSFNPPPPGTKGVKHVEMPGPFPMGKFPEEGKSR 28
           FAPP+MPRPWTGK PL     KIPVFDSFNPPP G KGVK+VEMPGP+P GKFPEEGKSR
Sbjct: 75  FAPPTMPRPWTGKPPLKTSKKKIPVFDSFNPPPAGKKGVKYVEMPGPYPFGKFPEEGKSR 134

Query: 27  EEILGEPLK 1
           EEILGEPLK
Sbjct: 135 EEILGEPLK 143


>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
           gi|297739063|emb|CBI28552.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  227 bits (579), Expect = 7e-58
 Identities = 108/127 (85%), Positives = 115/127 (90%)
 Frame = -2

Query: 384 YYKPVKHGGTITSDGDRSVIIGESGVSYLLPGAPFEFQYSYSETPKAKPLAIREPAFLPF 205
           YYKPV  G  I SDGDRSV+IGESGVSYLLPGAPFEFQ+SYSETPKAKPLAIREPAFLPF
Sbjct: 71  YYKPVSDG-VIASDGDRSVVIGESGVSYLLPGAPFEFQFSYSETPKAKPLAIREPAFLPF 129

Query: 204 APPSMPRPWTGKAPLXXXXXKIPVFDSFNPPPPGTKGVKHVEMPGPFPMGKFPEEGKSRE 25
           APP+MPRPWTGKAPL     KIP+FDSFNPPPPGTKGVK VEMPGPFP+GKFP EG++RE
Sbjct: 130 APPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPFPLGKFPVEGRTRE 189

Query: 24  EILGEPL 4
           EILGEPL
Sbjct: 190 EILGEPL 196


>emb|CAN67999.1| hypothetical protein VITISV_025803 [Vitis vinifera]
          Length = 331

 Score =  227 bits (579), Expect = 7e-58
 Identities = 108/127 (85%), Positives = 115/127 (90%)
 Frame = -2

Query: 384 YYKPVKHGGTITSDGDRSVIIGESGVSYLLPGAPFEFQYSYSETPKAKPLAIREPAFLPF 205
           YYKPV  G  I SDGDRSV+IGESGVSYLLPGAPFEFQ+SYSETPKAKPLAIREPAFLPF
Sbjct: 71  YYKPVSDG-VIASDGDRSVVIGESGVSYLLPGAPFEFQFSYSETPKAKPLAIREPAFLPF 129

Query: 204 APPSMPRPWTGKAPLXXXXXKIPVFDSFNPPPPGTKGVKHVEMPGPFPMGKFPEEGKSRE 25
           APP+MPRPWTGKAPL     KIP+FDSFNPPPPGTKGVK VEMPGPFP+GKFP EG++RE
Sbjct: 130 APPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPFPLGKFPVEGRTRE 189

Query: 24  EILGEPL 4
           EILGEPL
Sbjct: 190 EILGEPL 196


>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Vitis vinifera]
          Length = 560

 Score =  224 bits (571), Expect = 6e-57
 Identities = 107/127 (84%), Positives = 114/127 (89%)
 Frame = -2

Query: 384 YYKPVKHGGTITSDGDRSVIIGESGVSYLLPGAPFEFQYSYSETPKAKPLAIREPAFLPF 205
           YYKPV  G  I SDGDRSV+IGESGVSYLL GAPFEFQ+SYSETPKAKPLAIREPAFLPF
Sbjct: 71  YYKPVSDG-VIASDGDRSVVIGESGVSYLLAGAPFEFQFSYSETPKAKPLAIREPAFLPF 129

Query: 204 APPSMPRPWTGKAPLXXXXXKIPVFDSFNPPPPGTKGVKHVEMPGPFPMGKFPEEGKSRE 25
           APP+MPRPWTGKAPL     KIP+FDSFNPPPPGTKGVK VEMPGPFP+GKFP EG++RE
Sbjct: 130 APPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPFPLGKFPVEGRTRE 189

Query: 24  EILGEPL 4
           EILGEPL
Sbjct: 190 EILGEPL 196


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score =  221 bits (564), Expect = 4e-56
 Identities = 102/128 (79%), Positives = 117/128 (91%)
 Frame = -2

Query: 384 YYKPVKHGGTITSDGDRSVIIGESGVSYLLPGAPFEFQYSYSETPKAKPLAIREPAFLPF 205
           YYKPVK G  I+S+G+R+V+IG+SGVSYLLPGAPFEFQYSYSETP  KP+AIREPAFLPF
Sbjct: 117 YYKPVKDG-VISSNGERAVVIGDSGVSYLLPGAPFEFQYSYSETPNVKPIAIREPAFLPF 175

Query: 204 APPSMPRPWTGKAPLXXXXXKIPVFDSFNPPPPGTKGVKHVEMPGPFPMGKFPEEGKSRE 25
           APP+MPRPWTGKAPL     KIP+FDSFNPPPPGTKGVK V++PGPFP+G++P+EGKSRE
Sbjct: 176 APPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVQLPGPFPLGQYPKEGKSRE 235

Query: 24  EILGEPLK 1
           EILGEPLK
Sbjct: 236 EILGEPLK 243


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