BLASTX nr result

ID: Glycyrrhiza23_contig00021635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021635
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542639.1| PREDICTED: CCR4-NOT transcription complex su...   205   1e-50
ref|XP_003549742.1| PREDICTED: CCR4-NOT transcription complex su...   202   8e-50
ref|XP_003609405.1| CCR4-NOT transcription complex subunit 10-B ...   184   2e-44
emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]   140   3e-31
emb|CBI28248.3| unnamed protein product [Vitis vinifera]              140   5e-31

>ref|XP_003542639.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Glycine
            max]
          Length = 859

 Score =  205 bits (521), Expect = 1e-50
 Identities = 108/141 (76%), Positives = 114/141 (80%)
 Frame = +2

Query: 2    EDCEKWQAERTAEFEEVTGGSTAAKNSSLQDTQSIVFLKPEEARATIYANFAAMSAMQGE 181
            EDCEKWQ ERTA+FEEV GGSTAAKNSSL+ TQSIVFLKPEEARATIYANFA MSAMQGE
Sbjct: 739  EDCEKWQPERTADFEEVNGGSTAAKNSSLEGTQSIVFLKPEEARATIYANFAVMSAMQGE 798

Query: 182  FEKANVLVTQALSILPNSPEXXXXXXXXXXXXXXXXXXXXXTLTAVYVDLLLGKPQEALA 361
            FEK+N+LV QALS+LPNSPE                     TLTAVYVDLLLGKPQEAL 
Sbjct: 799  FEKSNILVAQALSLLPNSPE--------------------ATLTAVYVDLLLGKPQEALT 838

Query: 362  KLKRCSRIRFLPSGVTLNKSS 424
            KLKRCSRIRFLPSG+TLNKSS
Sbjct: 839  KLKRCSRIRFLPSGITLNKSS 859


>ref|XP_003549742.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Glycine
            max]
          Length = 857

 Score =  202 bits (514), Expect = 8e-50
 Identities = 106/141 (75%), Positives = 113/141 (80%)
 Frame = +2

Query: 2    EDCEKWQAERTAEFEEVTGGSTAAKNSSLQDTQSIVFLKPEEARATIYANFAAMSAMQGE 181
            EDCEKWQ ERTA+F+EV GGST AKNSSL+ TQSIVFLKPEEARATIYANFA MSAMQGE
Sbjct: 737  EDCEKWQPERTADFDEVNGGSTTAKNSSLEGTQSIVFLKPEEARATIYANFAVMSAMQGE 796

Query: 182  FEKANVLVTQALSILPNSPEXXXXXXXXXXXXXXXXXXXXXTLTAVYVDLLLGKPQEALA 361
            FEK+N+LV QALSILPNSPE                     TLTAVYVDL+LGKPQEAL 
Sbjct: 797  FEKSNILVAQALSILPNSPE--------------------ATLTAVYVDLMLGKPQEALT 836

Query: 362  KLKRCSRIRFLPSGVTLNKSS 424
            KLKRCSRIRFLPSG+TLNKSS
Sbjct: 837  KLKRCSRIRFLPSGITLNKSS 857


>ref|XP_003609405.1| CCR4-NOT transcription complex subunit 10-B [Medicago truncatula]
            gi|355510460|gb|AES91602.1| CCR4-NOT transcription
            complex subunit 10-B [Medicago truncatula]
          Length = 881

 Score =  184 bits (468), Expect = 2e-44
 Identities = 101/147 (68%), Positives = 110/147 (74%)
 Frame = +2

Query: 2    EDCEKWQAERTAEFEEVTGGSTAAKNSSLQDTQSIVFLKPEEARATIYANFAAMSAMQGE 181
            +DCEK Q ERT EFE+  GGSTAAKNSSLQD QSIVFLKPEEARA+IYANFA MSAMQGE
Sbjct: 737  DDCEKLQVERTVEFEDGNGGSTAAKNSSLQDPQSIVFLKPEEARASIYANFAVMSAMQGE 796

Query: 182  FEKANVLVTQALSILPNSPEXXXXXXXXXXXXXXXXXXXXXTLTAVYVDLLLGKPQEALA 361
             EKAN+LVTQALSILPNSPE                     TLTAVYVDLLLGKPQEALA
Sbjct: 797  LEKANILVTQALSILPNSPE--------------------ATLTAVYVDLLLGKPQEALA 836

Query: 362  KLKRCSRIRFLPSGVTLNKSS*VLYAW 442
            KLK CSRIRFLPSG   + +  +L+ +
Sbjct: 837  KLKSCSRIRFLPSGFASSTNVVILHRY 863


>emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]
          Length = 701

 Score =  140 bits (354), Expect = 3e-31
 Identities = 79/141 (56%), Positives = 90/141 (63%)
 Frame = +2

Query: 2   EDCEKWQAERTAEFEEVTGGSTAAKNSSLQDTQSIVFLKPEEARATIYANFAAMSAMQGE 181
           ED E+W+AE+T + EEV GGS   KN SL+D Q I FLKPEEAR T+YAN A MSAMQGE
Sbjct: 581 EDREQWRAEKTMDCEEVNGGSLTGKNPSLEDLQGITFLKPEEARGTLYANLATMSAMQGE 640

Query: 182 FEKANVLVTQALSILPNSPEXXXXXXXXXXXXXXXXXXXXXTLTAVYVDLLLGKPQEALA 361
            E+A   V QALSI+PNS E                      LTAVYVDL+ GK QEALA
Sbjct: 641 LEQARQFVKQALSIIPNSSE--------------------VILTAVYVDLVXGKTQEALA 680

Query: 362 KLKRCSRIRFLPSGVTLNKSS 424
           KLK+CS +RFL S   L  SS
Sbjct: 681 KLKQCSHVRFLASSSQLTCSS 701


>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score =  140 bits (352), Expect = 5e-31
 Identities = 79/141 (56%), Positives = 90/141 (63%)
 Frame = +2

Query: 2    EDCEKWQAERTAEFEEVTGGSTAAKNSSLQDTQSIVFLKPEEARATIYANFAAMSAMQGE 181
            ED E+W+AE+T + EEV GGS   KN SL+D Q I FLKPEEAR T+YAN A MSAMQGE
Sbjct: 692  EDREQWRAEKTMDCEEVNGGSLTGKNPSLEDLQGITFLKPEEARGTLYANLATMSAMQGE 751

Query: 182  FEKANVLVTQALSILPNSPEXXXXXXXXXXXXXXXXXXXXXTLTAVYVDLLLGKPQEALA 361
             E+A   V QALSI+PNS E                      LTAVYVDL+ GK QEALA
Sbjct: 752  LEQARQFVKQALSIIPNSSE--------------------VILTAVYVDLVHGKTQEALA 791

Query: 362  KLKRCSRIRFLPSGVTLNKSS 424
            KLK+CS +RFL S   L  SS
Sbjct: 792  KLKQCSHVRFLASSSQLTCSS 812


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