BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021608
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I sub...   954   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   953   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   837   0.0  
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   829   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              829   0.0  

>ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score =  954 bits (2467), Expect = 0.0
 Identities = 468/517 (90%), Positives = 487/517 (94%)
 Frame = -2

Query: 1553 EINKESKKFDLGDIVQVKKVMDKNSSKQISISVENMLKTGRLITQTGLDLQQRAGYTVQA 1374
            EI+K+SKKFD  DIVQVKKVMDKNS KQ+S +VENMLKTGRL+TQTGLDLQQRAGYTVQA
Sbjct: 394  EIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQA 453

Query: 1373 ERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCT 1194
            ERLNFLRF+SHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCT
Sbjct: 454  ERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCT 513

Query: 1193 CRITSFFDSQGNIKDYFKIKMSILNILIEVGMTQSLPKLFLPGPPEVLTVLLDGCIVGCI 1014
             RITSFFDSQGN+KDYFKIKMSILN+L+EVGMT SLPK+FLPGPPE LTVLLDGC+VGCI
Sbjct: 514  SRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCI 573

Query: 1013 PSTEVEKVVAHIRELKVSSAAVIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNIS 834
             S+E EKVVAHIRELKVSSAAVIPDD+EVGYVPLSMGGAYPGLYL TSPSRFVRPVRNIS
Sbjct: 574  ASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNIS 633

Query: 833  IPSNGSESIELIGPFEQVFMEIQCPDGGDGGRKSPFPATHEEIHPTGMLSVVANLTPWSD 654
            IPSNGSE+IE IGPFEQVFMEI+CPDGGDGGRKS FPATHEEIHPT MLSVVANLTPWSD
Sbjct: 634  IPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSD 693

Query: 653  HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSSYTKYNIDEFPTG 474
            HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTS+YTKYNIDEFPTG
Sbjct: 694  HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTG 753

Query: 473  TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGIRSDRSSRIFRKX 294
            TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQG R DRSSR+FRK 
Sbjct: 754  TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRLDRSSRMFRKS 813

Query: 293  XXXXXXXXXXXXDGLPHVGQMIRPDEPYCSIYNEVTNSVHTFKRKGSEPVYVDYVAVDVK 114
                        DGLPHVGQMIRPDEPYCSIYNEVT+S+HT KRKGSE VYVDYVAVDVK
Sbjct: 814  NLEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAVDVK 873

Query: 113  NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQL 3
            NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQL
Sbjct: 874  NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQL 910


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
            max]
          Length = 1175

 Score =  953 bits (2464), Expect = 0.0
 Identities = 469/517 (90%), Positives = 487/517 (94%)
 Frame = -2

Query: 1553 EINKESKKFDLGDIVQVKKVMDKNSSKQISISVENMLKTGRLITQTGLDLQQRAGYTVQA 1374
            EI+K+SKKFD  DIVQVKKVMDKNS KQ+S +VENMLKTGRL+TQTGLDLQQRAGYTVQA
Sbjct: 394  EIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQA 453

Query: 1373 ERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCT 1194
            ERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCT
Sbjct: 454  ERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCT 513

Query: 1193 CRITSFFDSQGNIKDYFKIKMSILNILIEVGMTQSLPKLFLPGPPEVLTVLLDGCIVGCI 1014
             RITSFFDSQGNIKDYFKIKMSILN+L+EVGMT SLPK+FLPGPPE LTVLLDGC+VGCI
Sbjct: 514  SRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCI 573

Query: 1013 PSTEVEKVVAHIRELKVSSAAVIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNIS 834
             S+EVEKVVAHIRELKVSS AVIPDD+EVGYVPLSMGGAYPGLYL TSPSRFVRPVRNIS
Sbjct: 574  ASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNIS 633

Query: 833  IPSNGSESIELIGPFEQVFMEIQCPDGGDGGRKSPFPATHEEIHPTGMLSVVANLTPWSD 654
            I S+GSE+IELIGPFEQVFMEI+CPDGGDGGRKS FPATHEEIHPT MLSVVANLTPWSD
Sbjct: 634  IASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSD 693

Query: 653  HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSSYTKYNIDEFPTG 474
            HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTS+YTKYNIDEFPTG
Sbjct: 694  HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTG 753

Query: 473  TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGIRSDRSSRIFRKX 294
            TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQG RSDRSSR+FRK 
Sbjct: 754  TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFRKS 813

Query: 293  XXXXXXXXXXXXDGLPHVGQMIRPDEPYCSIYNEVTNSVHTFKRKGSEPVYVDYVAVDVK 114
                        DGLPHVGQMIRPDEPYCSIYNEVT+S+HT KRKGSE VYVDYVA DVK
Sbjct: 814  NIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAADVK 873

Query: 113  NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQL 3
            NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQL
Sbjct: 874  NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQL 910


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score =  837 bits (2161), Expect = 0.0
 Identities = 404/513 (78%), Positives = 455/513 (88%)
 Frame = -2

Query: 1541 ESKKFDLGDIVQVKKVMDKNSSKQISISVENMLKTGRLITQTGLDLQQRAGYTVQAERLN 1362
            ++  F+   ++ VKKV+DKN S  IS++VENMLKTGRL+TQTGLDLQQRAGYTVQAERLN
Sbjct: 383  KNNNFNFLSVLDVKKVIDKNPSTTISLAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLN 442

Query: 1361 FLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRIT 1182
            FLRFLS FRAVHRGASFAGLRTT+VRKLLPESWGFLCPVHTPDGEPCGLLNHMT +CRIT
Sbjct: 443  FLRFLSFFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRIT 502

Query: 1181 SFFDSQGNIKDYFKIKMSILNILIEVGMTQSLPKLFLPGPPEVLTVLLDGCIVGCIPSTE 1002
            S+FDSQG +KD+F I+ SIL +L  +GMT SLPKL   GPP+VL+VLLDG +VG IPS++
Sbjct: 503  SYFDSQGAVKDFFDIRKSILGVLTSLGMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQ 562

Query: 1001 VEKVVAHIRELKVSSAAVIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSN 822
            VEKVV H+R LKV++++VIPDDLEVGYVPLSMGGA+PGLYLFTSPSRF+RPV+NISIP+ 
Sbjct: 563  VEKVVVHLRRLKVAASSVIPDDLEVGYVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAG 622

Query: 821  GSESIELIGPFEQVFMEIQCPDGGDGGRKSPFPATHEEIHPTGMLSVVANLTPWSDHNQS 642
              E+IELIGPFEQVFMEI+CPDGG+GGR   FPATHEEIHPT MLSVVANLTPWSDHNQS
Sbjct: 623  EGENIELIGPFEQVFMEIRCPDGGNGGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQS 682

Query: 641  PRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSSYTKYNIDEFPTGTNAI 462
            PRNMYQCQMAKQTMAFS Q+++ RADQKLYHLQTPQTPIVRTSSYTKY +DE+PTGTNAI
Sbjct: 683  PRNMYQCQMAKQTMAFSLQSLRFRADQKLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAI 742

Query: 461  VAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGIRSDRSSRIFRKXXXXX 282
            VAVLAYTGYDMEDAMILNKSSVERGM HGQIYQTETIDL+E+G RSDR+ R+FR+     
Sbjct: 743  VAVLAYTGYDMEDAMILNKSSVERGMCHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDK 802

Query: 281  XXXXXXXXDGLPHVGQMIRPDEPYCSIYNEVTNSVHTFKRKGSEPVYVDYVAVDVKNKKH 102
                    DGLP+VGQMI P+EPYCSIYNE+TN+  T  RKGS+PV VDYVA+D KNKKH
Sbjct: 803  SLHSVIDSDGLPYVGQMIHPNEPYCSIYNEITNTTRTNNRKGSDPVIVDYVAIDTKNKKH 862

Query: 101  LQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQL 3
            LQKVNIRFRHPRNP+IGDKFSSRHGQKGVCSQL
Sbjct: 863  LQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQL 895


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  829 bits (2142), Expect = 0.0
 Identities = 404/517 (78%), Positives = 452/517 (87%)
 Frame = -2

Query: 1553 EINKESKKFDLGDIVQVKKVMDKNSSKQISISVENMLKTGRLITQTGLDLQQRAGYTVQA 1374
            EINK  K F+   +  VKKVMDKN S+QIS++VENMLKTGRL+TQ+GLDLQQRAG TVQA
Sbjct: 364  EINKR-KNFEFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQA 422

Query: 1373 ERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCT 1194
            ERLNFLRFLSHFRAVHRGASFAGLRTT+VRKLLPE+WGFLCPVHTPDGEPCGLLNHM  T
Sbjct: 423  ERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMAST 482

Query: 1193 CRITSFFDSQGNIKDYFKIKMSILNILIEVGMTQSLPKLFLPGPPEVLTVLLDGCIVGCI 1014
            CRITS+FDS+GN +D+FKI+MSIL++LI +GMT +LPKL   GPPEVL+V+LDG +VG I
Sbjct: 483  CRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSI 542

Query: 1013 PSTEVEKVVAHIRELKVSSAAVIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNIS 834
            PS+EVE  V H+R LKVS+ +VIPDDLEVGY+PLSMGGAYPGLYLFTSPSRFVRPVRNIS
Sbjct: 543  PSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNIS 602

Query: 833  IPSNGSESIELIGPFEQVFMEIQCPDGGDGGRKSPFPATHEEIHPTGMLSVVANLTPWSD 654
            IPS     IELIGPFEQV+MEI+CPDG DGGR++ FPATHEEIHPTGMLSVVA+LTPWSD
Sbjct: 603  IPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSD 662

Query: 653  HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSSYTKYNIDEFPTG 474
            HNQSPRNMYQCQM KQTMAFSSQ I  RADQKLYHLQTPQTPIVRTS+Y KY++DEFPTG
Sbjct: 663  HNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTG 722

Query: 473  TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGIRSDRSSRIFRKX 294
            TNAIVAVLAY+GYDMEDAMILNKSSV+RG+ HGQIYQTETIDL+++  +SDR  R+FR+ 
Sbjct: 723  TNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRS 782

Query: 293  XXXXXXXXXXXXDGLPHVGQMIRPDEPYCSIYNEVTNSVHTFKRKGSEPVYVDYVAVDVK 114
                        DGLP+VGQMI P+EPYCSIYNEVT+S    K KGSEPV VDYVA+D K
Sbjct: 783  NVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAK 842

Query: 113  NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQL 3
            NKKH QKVNIRFR PRNP+IGDKFSSRHGQKGVCSQL
Sbjct: 843  NKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQL 879


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  829 bits (2142), Expect = 0.0
 Identities = 404/517 (78%), Positives = 452/517 (87%)
 Frame = -2

Query: 1553 EINKESKKFDLGDIVQVKKVMDKNSSKQISISVENMLKTGRLITQTGLDLQQRAGYTVQA 1374
            EINK  K F+   +  VKKVMDKN S+QIS++VENMLKTGRL+TQ+GLDLQQRAG TVQA
Sbjct: 357  EINKR-KNFEFSSLAHVKKVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQA 415

Query: 1373 ERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCT 1194
            ERLNFLRFLSHFRAVHRGASFAGLRTT+VRKLLPE+WGFLCPVHTPDGEPCGLLNHM  T
Sbjct: 416  ERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMAST 475

Query: 1193 CRITSFFDSQGNIKDYFKIKMSILNILIEVGMTQSLPKLFLPGPPEVLTVLLDGCIVGCI 1014
            CRITS+FDS+GN +D+FKI+MSIL++LI +GMT +LPKL   GPPEVL+V+LDG +VG I
Sbjct: 476  CRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSI 535

Query: 1013 PSTEVEKVVAHIRELKVSSAAVIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNIS 834
            PS+EVE  V H+R LKVS+ +VIPDDLEVGY+PLSMGGAYPGLYLFTSPSRFVRPVRNIS
Sbjct: 536  PSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNIS 595

Query: 833  IPSNGSESIELIGPFEQVFMEIQCPDGGDGGRKSPFPATHEEIHPTGMLSVVANLTPWSD 654
            IPS     IELIGPFEQV+MEI+CPDG DGGR++ FPATHEEIHPTGMLSVVA+LTPWSD
Sbjct: 596  IPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSD 655

Query: 653  HNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSSYTKYNIDEFPTG 474
            HNQSPRNMYQCQM KQTMAFSSQ I  RADQKLYHLQTPQTPIVRTS+Y KY++DEFPTG
Sbjct: 656  HNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTG 715

Query: 473  TNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGIRSDRSSRIFRKX 294
            TNAIVAVLAY+GYDMEDAMILNKSSV+RG+ HGQIYQTETIDL+++  +SDR  R+FR+ 
Sbjct: 716  TNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRS 775

Query: 293  XXXXXXXXXXXXDGLPHVGQMIRPDEPYCSIYNEVTNSVHTFKRKGSEPVYVDYVAVDVK 114
                        DGLP+VGQMI P+EPYCSIYNEVT+S    K KGSEPV VDYVA+D K
Sbjct: 776  NVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAK 835

Query: 113  NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQL 3
            NKKH QKVNIRFR PRNP+IGDKFSSRHGQKGVCSQL
Sbjct: 836  NKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQL 872