BLASTX nr result

ID: Glycyrrhiza23_contig00021593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021593
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33309.1| Ribonuclease H [Medicago truncatula]                   101   1e-19
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatul...   101   1e-19
gb|AFK48593.1| unknown [Lotus japonicus]                               99   5e-19
gb|ABN09101.1| Ribonuclease H [Medicago truncatula]                    94   2e-17
ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]...    90   2e-16

>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  101 bits (251), Expect = 1e-19
 Identities = 53/148 (35%), Positives = 79/148 (53%)
 Frame = -1

Query: 446  LNVDGSCQGSPAKAVFGGLLRRGSGEWILSFYEYLGYSNSLQVELAAIFHGLVATWSSGH 267
            LNVDG C  +P  A +GGL R   G W+  FY  LG++  ++ EL AI  GL+  W  G+
Sbjct: 1185 LNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGLITAWDFGY 1244

Query: 266  CRILLYFDSTMVLSLLT*KVRP*HRHGALVCRIKELLQREWEVRQCRTWRDDNFCANALA 87
              IL+  D    +  +         +G+LV  I+ L+QR W +    + ++DN CA+ L+
Sbjct: 1245 RNILVETDYLEAIKHIEEANIEHDAYGSLVADIRSLMQRNWSLNLDHSLKEDNACADILS 1304

Query: 86   KRGAIQMEILCLLDQPPRELLHLLRGDA 3
            + GA Q E+ C    PP++L   L  DA
Sbjct: 1305 RIGAEQHEVYCFHAYPPQQLQLALMADA 1332


>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
            gi|355500090|gb|AES81293.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1579

 Score =  101 bits (251), Expect = 1e-19
 Identities = 53/148 (35%), Positives = 79/148 (53%)
 Frame = -1

Query: 446  LNVDGSCQGSPAKAVFGGLLRRGSGEWILSFYEYLGYSNSLQVELAAIFHGLVATWSSGH 267
            LNVDG C  +P  A +GGL R   G W+  FY  LG++  ++ EL AI  GL+  W  G+
Sbjct: 1368 LNVDGCCMDNPRSAGYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGLITAWDFGY 1427

Query: 266  CRILLYFDSTMVLSLLT*KVRP*HRHGALVCRIKELLQREWEVRQCRTWRDDNFCANALA 87
              IL+  D    +  +         +G+LV  I+ L+QR W +    + ++DN CA+ L+
Sbjct: 1428 RNILVETDYLEAIKHIEEANIEHDAYGSLVADIRSLMQRNWSLNLDHSLKEDNACADILS 1487

Query: 86   KRGAIQMEILCLLDQPPRELLHLLRGDA 3
            + GA Q E+ C    PP++L   L  DA
Sbjct: 1488 RIGAEQHEVYCFHAYPPQQLQLALMADA 1515


>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 58/150 (38%), Positives = 78/150 (52%)
 Frame = -1

Query: 452 LVLNVDGSCQGSPAKAVFGGLLRRGSGEWILSFYEYLGYSNSLQVELAAIFHGLVATWSS 273
           +VLNVDGS  G+P +  FGG  R   G W+  F+ YL     L +EL  +FHGL   W  
Sbjct: 115 VVLNVDGSVHGTPQRGGFGGCFRTIHGNWLRGFFGYLDECCILHLELLGMFHGLSLAWEQ 174

Query: 272 GHCRILLYFDSTMVLSLLT*KVRP*HRHGALVCRIKELLQREWEVRQCRTWRDDNFCANA 93
           G+  +    DS   ++L+       HR+ ALV  IK+L  R+W V    T R+ N CA+ 
Sbjct: 175 GYRIVECQSDSQDAVTLVKSTPSSCHRYAALVWDIKDLQSRDWIVELRHTLREGNACADL 234

Query: 92  LAKRGAIQMEILCLLDQPPRELLHLLRGDA 3
           L K GA Q + L + + P   L  LL  DA
Sbjct: 235 LVKHGADQNDDLVITENPIAGLGVLLLADA 264


>gb|ABN09101.1| Ribonuclease H [Medicago truncatula]
          Length = 170

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 59/150 (39%), Positives = 77/150 (51%)
 Frame = -1

Query: 452 LVLNVDGSCQGSPAKAVFGGLLRRGSGEWILSFYEYLGYSNSLQVELAAIFHGLVATWSS 273
           L +NVDGS  G+P +A FGGL+R   G WI  F E  G  ++L VEL AI +GL   W  
Sbjct: 12  LKINVDGSSFGNPGRAGFGGLIRNDVGGWIHGFSESCGRVSNLLVELYAILNGLQLAWDL 71

Query: 272 GHCRILLYFDSTMVLSLLT*KVRP*HRHGALVCRIKELLQREWEVRQCRTWRDDNFCANA 93
           G   I L  D    L L+       H H  ++ RI+ L+ R+W +    T R+ N CA+ 
Sbjct: 72  GFRIITLEPDYKSALDLILDNDTTYHPHAIVLGRIRTLMSRDWSLLFNHTLREGNECADW 131

Query: 92  LAKRGAIQMEILCLLDQPPRELLHLLRGDA 3
           LAK  A     L L   PP +  H+L  DA
Sbjct: 132 LAKYDAQSDVSLKLWVSPPPQFAHVLLADA 161


>ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
            gi|355495128|gb|AES76331.1| Resistance protein PRG
            [Medicago truncatula]
          Length = 1256

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
 Frame = -1

Query: 452  LVLNVDGSCQGSPAKAVFGGLLRRGSGEWILSFYEYLGYSNS-LQVELAAIFHGLVATWS 276
            ++LNVDGSC G+P +A FGG++R  +G ++ +F  ++  S   L  EL AIFHGL    S
Sbjct: 1099 IILNVDGSCLGTPIRAGFGGIIRNNAGLFLKAFSGFIQDSTCILHAELTAIFHGLTLAAS 1158

Query: 275  SGHCRILLYFDSTMVLSLLT*KVRP*HRHGALVCRIKELLQREWEVRQCRTWRDDNFCAN 96
             G   +  + DS + +SL+T  +   H +  L+  IKE+L          T R+ N CA+
Sbjct: 1159 MGIEELACFSDSQIAISLITAAIPRFHAYAVLIQDIKEILASN-NFTILHTLREGNHCAD 1217

Query: 95   ALAKRGAIQMEILCLLDQPPRELLHLLRGDA 3
             +AK GA   E       PP +L+  ++ DA
Sbjct: 1218 FMAKLGASSTEEFTEHHNPPHDLIVKIKDDA 1248


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