BLASTX nr result

ID: Glycyrrhiza23_contig00021585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021585
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541444.1| PREDICTED: protein ROS1-like [Glycine max]        218   8e-55
ref|XP_003537037.1| PREDICTED: uncharacterized protein LOC100806...   208   8e-52
ref|XP_003520681.1| PREDICTED: protein ROS1-like [Glycine max]        143   3e-32
gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]      77   3e-12
ref|XP_002528585.1| Protein ROS1, putative [Ricinus communis] gi...    62   1e-07

>ref|XP_003541444.1| PREDICTED: protein ROS1-like [Glycine max]
          Length = 1881

 Score =  218 bits (555), Expect = 8e-55
 Identities = 115/200 (57%), Positives = 139/200 (69%), Gaps = 1/200 (0%)
 Frame = -1

Query: 597  TCTQEDAQAHHYASNSSCWMYGSGYNAAIVPAVSDST-KFILNNSQTFDEFVLSLRMMTE 421
            TC QEDA  H YAS+SSCW YGSGYN A VPA S ST K  ++N+QTF+EFVLSL+ + E
Sbjct: 596  TCPQEDALGHPYASSSSCWTYGSGYNTARVPATSGSTEKLKIDNTQTFNEFVLSLKRLAE 655

Query: 420  RFQPRTQTCDCNSLMRIRNCNAEPNYTAKPLGILEWQSFGDTERPQTCTDIIVSEMCASH 241
            R Q  T TCD  SL RIRNC+ EPNYTAK +G+   ++FGD          +V+E C   
Sbjct: 656  RSQ--TSTCDHGSLTRIRNCDTEPNYTAKQVGVSGRETFGDA------IGALVAETCTPP 707

Query: 240  AKKKRNRNKIVLSSPAHSSISEMQQHHNFALGNHHLPLGKSSGIANGVIWKTMHDIEALA 61
             KKKRNR K V SS AHS+ +EM Q+HNF L N+ LP+GK S I   V+W TM++I+AL 
Sbjct: 708  TKKKRNRKKSVPSSSAHSTTNEMLQNHNFTLENYPLPMGKPSDIVPEVLWNTMNNIDALT 767

Query: 60   EQFRQLNINTEARHLALHEQ 1
             QFRQLN+NTE R LA HEQ
Sbjct: 768  LQFRQLNLNTEVRDLAFHEQ 787


>ref|XP_003537037.1| PREDICTED: uncharacterized protein LOC100806794 [Glycine max]
          Length = 1903

 Score =  208 bits (529), Expect = 8e-52
 Identities = 110/204 (53%), Positives = 136/204 (66%)
 Frame = -1

Query: 612  KGAPLTCTQEDAQAHHYASNSSCWMYGSGYNAAIVPAVSDSTKFILNNSQTFDEFVLSLR 433
            K   LTC QEDA  H YAS+SSCW YGSGYN A VPA S      ++N+QTF+EF+LSL+
Sbjct: 676  KEVQLTCPQEDALGHPYASSSSCWTYGSGYNTARVPATS------IDNTQTFNEFLLSLK 729

Query: 432  MMTERFQPRTQTCDCNSLMRIRNCNAEPNYTAKPLGILEWQSFGDTERPQTCTDIIVSEM 253
             + E  Q  T TCD  SL RIRNC+ EPNYTAK +G+   ++FGD          +V+E 
Sbjct: 730  RLAETSQ--TSTCDRGSLTRIRNCDTEPNYTAKQVGVPGKETFGDA------IGALVAET 781

Query: 252  CASHAKKKRNRNKIVLSSPAHSSISEMQQHHNFALGNHHLPLGKSSGIANGVIWKTMHDI 73
            C    KK++NR K VLSS AHS+ +EM  HHNF L N  LP+GK S I   V+W TM++I
Sbjct: 782  CTPPTKKRQNRKKSVLSSSAHSTTNEMLHHHNFTLENCPLPMGKPSDIVPEVLWNTMNNI 841

Query: 72   EALAEQFRQLNINTEARHLALHEQ 1
            +AL  QFRQLN+N EAR LA HE+
Sbjct: 842  DALTLQFRQLNLNAEARDLAFHEE 865


>ref|XP_003520681.1| PREDICTED: protein ROS1-like [Glycine max]
          Length = 1764

 Score =  143 bits (360), Expect = 3e-32
 Identities = 89/224 (39%), Positives = 126/224 (56%), Gaps = 5/224 (2%)
 Frame = -1

Query: 657  GKTSDTQITSCVTTKKGAPL-TCTQEDAQAHHYASNSSCWMYGSGYNAAIVPAVSDSTKF 481
            G+ S     S +T  K   L TC QEDA++H YAS+ +CW   S YNAA V  ++D+ + 
Sbjct: 455  GRISKASHKSSMTATKDVRLATCPQEDARSHSYASSLNCWA-SSEYNAAGVSVITDTERA 513

Query: 480  ILNNSQTFDEFVLSL---RMMTERFQPRTQTCDCNSLMRIRNCNAEPNYTAKPLGILEWQ 310
            I +  Q+  E+ LSL   R    R +  T+  DC+ L   RN + +   TAK     + Q
Sbjct: 514  IHDKPQSL-EYNLSLGQRRPTKRRSRVPTRIHDCSLLTITRNSDTKLALTAKETCSSDRQ 572

Query: 309  SFGDTERPQTCTDIIVSEMCASHAKKKRNRNKIVLSSPAHSSISEMQQHHNFALGNHHLP 130
            + GD +RPQTC D +V+EM  S  KKKR R + +  +  +S  +EMQQHH   L NH + 
Sbjct: 573  TSGDAKRPQTCIDALVAEMRGSLTKKKRTRKRSIPVNSKYSCTNEMQQHHKVVLENHSIS 632

Query: 129  LGKSS-GIANGVIWKTMHDIEALAEQFRQLNINTEARHLALHEQ 1
               ++ G+A   IWK +H ++ L EQF +LNI  EAR + LH Q
Sbjct: 633  HSHNALGVACEDIWKNIHTVDTLTEQFERLNIYREAREIVLHGQ 676


>gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]
          Length = 1758

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
 Frame = -1

Query: 486 KFILNNSQTFDEFVLSLRMMTERFQPRTQTC---DCNSLMRIRNCNAEPNY-TAKPLGIL 319
           KF LN  QTF   + S +  + + +   +T    D  SL  I  C   P Y +++P    
Sbjct: 491 KFSLNKMQTFSYIMASNQTESSKKKRTRETTGIQDLASLNGIAQCKRHPEYCSSQPPVDY 550

Query: 318 EWQSFGDTERPQTCTDIIVSEMCASHAKKKRNRNKIVLSSPAHSSISEMQQHHNFALGNH 139
           + +  G+T+RPQT  + +V+EM A  AK K+ + +  L S A SS +E Q H      + 
Sbjct: 551 DMREVGNTDRPQTSMEALVTEMQAKLAKTKQTKKRNCLVSSACSSTNEAQMHKKLLRASP 610

Query: 138 HLPLGKSSGIANGVIWKTMHDIEALAEQFRQLNINTEARHLALHEQ 1
                         IWK    ++AL EQF QL+IN E   +A  EQ
Sbjct: 611 E------------EIWKQFFSVDALLEQFNQLDINREGSAIACQEQ 644


>ref|XP_002528585.1| Protein ROS1, putative [Ricinus communis] gi|223531981|gb|EEF33793.1|
            Protein ROS1, putative [Ricinus communis]
          Length = 1634

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 4/214 (1%)
 Frame = -1

Query: 630  SCVTTKKGA---PLTCTQEDAQAHHYASNSSCWMYGSGYNAAIVP-AVSDSTKFILNNSQ 463
            SC TT  G     +   Q++ +     S   C +  S  NA  +P A  ++    L N  
Sbjct: 529  SCSTTLSGTLRLDIPGPQKNNRGDPPTSIVDCLLPASHSNADRIPGAFGETNGCQLKNET 588

Query: 462  TFDEFVLSLRMMTERFQPRTQTCDCNSLMRIRNCNAEPNYTAKPLGILEWQSFGDTERPQ 283
            +      + R   +R +  T+T D  SL +I       + T++     + Q   D   P 
Sbjct: 589  SGCVLAQTERSTKKRSRGHTRTRDLASLTKIAQGAMHLSSTSRRA--YDVQQVRDINGPD 646

Query: 282  TCTDIIVSEMCASHAKKKRNRNKIVLSSPAHSSISEMQQHHNFALGNHHLPLGKSSGIAN 103
             C D +V+EM  +  +KKR + ++++SS A SS +  Q H    L N +L    S     
Sbjct: 647  ACVDALVAEMRGTLTRKKRTKKRLLVSS-ASSSTNVEQAHGKIILYNQNLFSANSLVALP 705

Query: 102  GVIWKTMHDIEALAEQFRQLNINTEARHLALHEQ 1
             VI + M  I+A+AE  + L+IN E  +    EQ
Sbjct: 706  EVIREQMSTIDAIAEHLQHLDINREGSNFTYIEQ 739


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