BLASTX nr result

ID: Glycyrrhiza23_contig00021563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021563
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47046.1| unknown [Lotus japonicus]                              227   2e-57
ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   207   1e-51
ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containi...   206   4e-51
ref|XP_002330624.1| predicted protein [Populus trichocarpa] gi|2...   146   4e-33
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   141   1e-31

>gb|AFK47046.1| unknown [Lotus japonicus]
          Length = 496

 Score =  227 bits (579), Expect = 2e-57
 Identities = 120/194 (61%), Positives = 140/194 (72%), Gaps = 1/194 (0%)
 Frame = +2

Query: 119 MMLIRSISKL-YDTXXXXXXXXXXXXTGAPVGFSVLENRILGSGDPITSMAPILNQWVEE 295
           MML+RS  K  ++             T APV FS LE R+L SGDP T MAPILNQWVE 
Sbjct: 1   MMLLRSRRKQHFNMSLVSRPFPLYYSTEAPVDFSALETRVLKSGDPRTPMAPILNQWVEG 60

Query: 296 GRDVTHPVLKRLIIRLSRYHRFKHALQVSEWMSNKGNYDLSPGDIAKRLNLICKVHGVEQ 475
           G D+T   L+RLI RL+ + RF HALQVSEWMSN+ NYDLS G IAKR++LI KVHG+++
Sbjct: 61  GGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLIAKRIHLISKVHGLKK 120

Query: 476 AERFFRGIPDAKIGFKIYSALLSCYAEHESLXXXXXXXXXXXXLHPMHLTVCYNMMLKLY 655
           AE FF+GIPD K GFKIY++LLSCYAEH+SL            L PMHLTVCYN++LKLY
Sbjct: 121 AEDFFQGIPDDKRGFKIYASLLSCYAEHKSLEEAEAIMKKIKELRPMHLTVCYNILLKLY 180

Query: 656 AQVGKYEKLDRLMQ 697
           AQ GKYEKLDRLMQ
Sbjct: 181 AQKGKYEKLDRLMQ 194


>ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20710, mitochondrial-like [Glycine max]
          Length = 482

 Score =  207 bits (528), Expect = 1e-51
 Identities = 102/159 (64%), Positives = 126/159 (79%)
 Frame = +2

Query: 221 LENRILGSGDPITSMAPILNQWVEEGRDVTHPVLKRLIIRLSRYHRFKHALQVSEWMSNK 400
           LEN +  +GDP++S++PILNQWVEEGR+VT   L+ L  RL++  RF HALQV EWMSN+
Sbjct: 24  LENGVFKNGDPLSSVSPILNQWVEEGREVTKLQLEDLAYRLTQSRRFTHALQVLEWMSNE 83

Query: 401 GNYDLSPGDIAKRLNLICKVHGVEQAERFFRGIPDAKIGFKIYSALLSCYAEHESLXXXX 580
            NY+LSPG IAK++NLI KVHG+EQAER+FRGIPD KI FKIY+ALL CYAEH+S+    
Sbjct: 84  RNYELSPGSIAKQINLISKVHGLEQAERYFRGIPDDKIEFKIYAALLRCYAEHKSVEEAE 143

Query: 581 XXXXXXXXLHPMHLTVCYNMMLKLYAQVGKYEKLDRLMQ 697
                   LHP+++T C NMML+LYA+ GKYEKLDRLMQ
Sbjct: 144 AVMKXIKELHPVNITPCCNMMLELYAKKGKYEKLDRLMQ 182


>ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Glycine max]
          Length = 483

 Score =  206 bits (524), Expect = 4e-51
 Identities = 99/159 (62%), Positives = 124/159 (77%)
 Frame = +2

Query: 221 LENRILGSGDPITSMAPILNQWVEEGRDVTHPVLKRLIIRLSRYHRFKHALQVSEWMSNK 400
           LENR+   GDP+  ++PIL QWVEEGR+VT   L+ L+ RL++  RF HALQV EWMSN+
Sbjct: 24  LENRVFKVGDPVIPVSPILKQWVEEGREVTKLQLENLVYRLTQSRRFTHALQVLEWMSNE 83

Query: 401 GNYDLSPGDIAKRLNLICKVHGVEQAERFFRGIPDAKIGFKIYSALLSCYAEHESLXXXX 580
            NY+LSPG+IAK++NLI KV G+EQAE++FRGIPDAKI FKIY+ALL CYAEH+S+    
Sbjct: 84  RNYELSPGNIAKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSVEEAE 143

Query: 581 XXXXXXXXLHPMHLTVCYNMMLKLYAQVGKYEKLDRLMQ 697
                   LHP+++T C NMML+LYA+ GKYEKLDRLMQ
Sbjct: 144 AVLKKIKELHPVNITACCNMMLELYAKKGKYEKLDRLMQ 182


>ref|XP_002330624.1| predicted protein [Populus trichocarpa] gi|222872228|gb|EEF09359.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score =  146 bits (368), Expect = 4e-33
 Identities = 70/159 (44%), Positives = 104/159 (65%)
 Frame = +2

Query: 221 LENRILGSGDPITSMAPILNQWVEEGRDVTHPVLKRLIIRLSRYHRFKHALQVSEWMSNK 400
           L  RI    DP+  + P++ +WV+EG+ VT+  LK  I +L + HRF HALQ+S+WMS++
Sbjct: 35  LNRRISMVEDPMVPVIPVIEKWVQEGQVVTNSDLKHFIRKLRKIHRFSHALQISQWMSDQ 94

Query: 401 GNYDLSPGDIAKRLNLICKVHGVEQAERFFRGIPDAKIGFKIYSALLSCYAEHESLXXXX 580
             ++LSPGD+A RL+LI KVHG+EQA  +F  +P++  G ++Y ALL+CYA ++ L    
Sbjct: 95  RGHNLSPGDVAVRLDLISKVHGLEQAVTYFNSVPESLRGLEVYGALLNCYAHYKHLEEAE 154

Query: 581 XXXXXXXXLHPMHLTVCYNMMLKLYAQVGKYEKLDRLMQ 697
                   +  +   + YN+ML LY Q+GKYEK+  LMQ
Sbjct: 155 ATMRKMREMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQ 193


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  141 bits (356), Expect = 1e-31
 Identities = 74/168 (44%), Positives = 103/168 (61%)
 Frame = +2

Query: 194 TGAPVGFSVLENRILGSGDPITSMAPILNQWVEEGRDVTHPVLKRLIIRLSRYHRFKHAL 373
           + AP+    L  RI  +G P  S+ PIL +W+EEG DV  P L++ + +L +Y RF HAL
Sbjct: 34  SSAPI--DTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHAL 91

Query: 374 QVSEWMSNKGNYDLSPGDIAKRLNLICKVHGVEQAERFFRGIPDAKIGFKIYSALLSCYA 553
           QVSEWM++K    L PGD+A RL+LI KVHG+ +AE +F  IPD     ++Y ALL+C A
Sbjct: 92  QVSEWMTDKKGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCA 151

Query: 554 EHESLXXXXXXXXXXXXLHPMHLTVCYNMMLKLYAQVGKYEKLDRLMQ 697
             + L            L  +  ++ YN+ML LY+ +G YEKLD L+Q
Sbjct: 152 HSKLLGKAEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQ 199


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