BLASTX nr result

ID: Glycyrrhiza23_contig00021562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00021562
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
ref|XP_003630734.1| Pentatricopeptide repeat-containing protein ...   134   8e-30
ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
emb|CBI36294.3| unnamed protein product [Vitis vinifera]              130   1e-28

>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Glycine max]
          Length = 523

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/69 (91%), Positives = 65/69 (94%)
 Frame = -1

Query: 209 NVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQAYHCDHCEVNRALRLM 30
           NVFTYNCIIKRLCKNE VEEAY LLDEMIS GV+PDTWSYNAIQAYHCDHCEVNRA+RLM
Sbjct: 320 NVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLM 379

Query: 29  SRMEKDNCL 3
            RMEKDNCL
Sbjct: 380 FRMEKDNCL 388


>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Glycine max]
          Length = 523

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/69 (92%), Positives = 65/69 (94%)
 Frame = -1

Query: 209 NVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQAYHCDHCEVNRALRLM 30
           NVFTYNCIIK+LCKNE VEEAYQLLDEMIS GVKPDTWSYNAIQAYHCDHCEVNRALRLM
Sbjct: 320 NVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLM 379

Query: 29  SRMEKDNCL 3
            RMEKD CL
Sbjct: 380 FRMEKDICL 388


>ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524756|gb|AET05210.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/68 (89%), Positives = 65/68 (95%)
 Frame = -1

Query: 209 NVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQAYHCDHCEVNRALRLM 30
           NVFTYNCIIKRLCK +KVEEAYQLLDEMIS G+KPDTWSYNAIQAYHCDHCEVNRAL+L+
Sbjct: 317 NVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLI 376

Query: 29  SRMEKDNC 6
           SRMEKD C
Sbjct: 377 SRMEKDVC 384


>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  130 bits (327), Expect = 1e-28
 Identities = 56/69 (81%), Positives = 65/69 (94%)
 Frame = -1

Query: 209 NVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQAYHCDHCEVNRALRLM 30
           NVFTYNCI+K+LCK+EKV+EAYQLLDEMI  GV PD WSYNAIQA+HCDHCEVN+ALRL+
Sbjct: 323 NVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLI 382

Query: 29  SRMEKDNCL 3
           SRMEK+NC+
Sbjct: 383 SRMEKENCM 391


>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  130 bits (327), Expect = 1e-28
 Identities = 56/69 (81%), Positives = 65/69 (94%)
 Frame = -1

Query: 209 NVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQAYHCDHCEVNRALRLM 30
           NVFTYNCI+K+LCK+EKV+EAYQLLDEMI  GV PD WSYNAIQA+HCDHCEVN+ALRL+
Sbjct: 296 NVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLI 355

Query: 29  SRMEKDNCL 3
           SRMEK+NC+
Sbjct: 356 SRMEKENCM 364


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